RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
TARDBP-230ENST00000639083 THUMPD2Q9BTF0 503 aaKnown RBP13.95□□□□□ -0.18
TARDBP-230ENST00000639083 ADGRL3Q9HAR2 1447 aa13.95□□□□□ -0.18
TARDBP-230ENST00000639083 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
TARDBP-230ENST00000639083 PANK1Q8TE04 598 aa13.94□□□□□ -0.18
TARDBP-230ENST00000639083 PROSER2Q86WR7 435 aaPredicted RBP13.93□□□□□ -0.18
TARDBP-230ENST00000639083 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
TARDBP-230ENST00000639083 AMPHP49418 695 aa13.93□□□□□ -0.18
TARDBP-230ENST00000639083 PEAK1Q9H792 1746 aa13.92□□□□□ -0.18
TARDBP-230ENST00000639083 CT47B1P0C2W7 299 aaPredicted RBP13.92□□□□□ -0.18
TARDBP-230ENST00000639083 PSME1Q06323 249 aa13.92□□□□□ -0.18
TARDBP-230ENST00000639083 PIK3C2AO00443 1686 aa13.92□□□□□ -0.18
TARDBP-230ENST00000639083 ORAI2Q96SN7 254 aa13.92□□□□□ -0.18
TARDBP-230ENST00000639083 COG6Q9Y2V7 657 aa13.92□□□□□ -0.18
TARDBP-230ENST00000639083 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
TARDBP-230ENST00000639083 FLT4P35916 1363 aa13.91□□□□□ -0.18
TARDBP-230ENST00000639083 FAM83GA6ND36 823 aa13.91□□□□□ -0.18
TARDBP-230ENST00000639083 TNNQ9UQP3 1299 aa13.91□□□□□ -0.18
TARDBP-230ENST00000639083 FOXO3O43524 673 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 RLBP1P12271 317 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
TARDBP-230ENST00000639083 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 CLUAP1Q96AJ1 413 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 HSPA2P54652 639 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
TARDBP-230ENST00000639083 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
TARDBP-230ENST00000639083 HOXC9P31274 260 aa13.88□□□□□ -0.19
TARDBP-230ENST00000639083 GNAI1P63096 354 aa13.88□□□□□ -0.19
TARDBP-230ENST00000639083 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-230ENST00000639083 EYA1Q99502 592 aa13.88□□□□□ -0.19
TARDBP-230ENST00000639083 C19orf44Q9H6X5 657 aa13.88□□□□□ -0.19
TARDBP-230ENST00000639083 IFT57Q9NWB7 429 aa13.88□□□□□ -0.19
TARDBP-230ENST00000639083 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
TARDBP-230ENST00000639083 SKAP1Q86WV1 359 aa13.87□□□□□ -0.19
TARDBP-230ENST00000639083 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
TARDBP-230ENST00000639083 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-230ENST00000639083 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
TARDBP-230ENST00000639083 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
TARDBP-230ENST00000639083 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
TARDBP-230ENST00000639083 ARHGEF10O15013 1369 aa13.86□□□□□ -0.19
TARDBP-230ENST00000639083 IGSF1Q8N6C5 1336 aa13.85□□□□□ -0.19
TARDBP-230ENST00000639083 MCM10Q7L590 875 aa13.85□□□□□ -0.19
TARDBP-230ENST00000639083 TSPYL6Q8N831 410 aa13.85□□□□□ -0.19
TARDBP-230ENST00000639083 LTV1Q96GA3 475 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-230ENST00000639083 NOB1Q9ULX3 412 aaKnown RBP13.85□□□□□ -0.19
TARDBP-230ENST00000639083 ELL2O00472 640 aaPredicted RBP13.84□□□□□ -0.19
TARDBP-230ENST00000639083 TCERG1O14776 1098 aaKnown RBP13.84□□□□□ -0.19
TARDBP-230ENST00000639083 DZIP1LQ8IYY4 767 aaKnown RBP13.84□□□□□ -0.19
TARDBP-230ENST00000639083 RGPD1P0DJD0 1748 aa13.84□□□□□ -0.19
TARDBP-230ENST00000639083 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
TARDBP-230ENST00000639083 VAMP4O75379 141 aa13.84□□□□□ -0.19
TARDBP-230ENST00000639083 TRIM27P14373 513 aa13.84□□□□□ -0.19
TARDBP-230ENST00000639083 MTHFSDQ2M296 383 aaKnown RBP13.84□□□□□ -0.19
TARDBP-230ENST00000639083 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
TARDBP-230ENST00000639083 KDRP35968 1356 aa13.83□□□□□ -0.19
TARDBP-230ENST00000639083 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 IGHDP01880 384 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
TARDBP-230ENST00000639083 TMEM94Q12767 1356 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 DLG5Q8TDM6 1919 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 ATF7IPQ6VMQ6 1270 aa13.83□□□□□ -0.2
TARDBP-230ENST00000639083 MVPQ14764 893 aaKnown RBP13.82□□□□□ -0.2
TARDBP-230ENST00000639083 C8orf58Q8NAV2 365 aa13.82□□□□□ -0.2
TARDBP-230ENST00000639083 ZNF428Q96B54 188 aa13.82□□□□□ -0.2
TARDBP-230ENST00000639083 C1orf167Q5SNV9 1468 aa13.82□□□□□ -0.2
TARDBP-230ENST00000639083 ZBTB7CA1YPR0 619 aa13.81□□□□□ -0.2
TARDBP-230ENST00000639083 MS4A1P11836 297 aa13.81□□□□□ -0.2
TARDBP-230ENST00000639083 ATF3P18847 181 aa13.81□□□□□ -0.2
TARDBP-230ENST00000639083 KRT28Q7Z3Y7 464 aa13.81□□□□□ -0.2
TARDBP-230ENST00000639083 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
TARDBP-230ENST00000639083 IP6K1Q92551 441 aa13.81□□□□□ -0.2
TARDBP-230ENST00000639083 TWISTNBQ3B726 338 aaPredicted RBP13.81□□□□□ -0.2
TARDBP-230ENST00000639083 USP54Q70EL1 1684 aa13.8□□□□□ -0.2
TARDBP-230ENST00000639083 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
TARDBP-230ENST00000639083 GCP02774 474 aa13.8□□□□□ -0.2
TARDBP-230ENST00000639083 KIF16BQ96L93 1317 aa13.8□□□□□ -0.2
TARDBP-230ENST00000639083 AAMPQ13685 434 aa13.8□□□□□ -0.2
TARDBP-230ENST00000639083 PCDHB15Q9Y5E8 787 aa13.8□□□□□ -0.2
TARDBP-230ENST00000639083 CHL1O00533 1208 aa13.79□□□□□ -0.2
TARDBP-230ENST00000639083 USHBP1Q8N6Y0 703 aa13.79□□□□□ -0.2
TARDBP-230ENST00000639083 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
TARDBP-230ENST00000639083 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
TARDBP-230ENST00000639083 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-230ENST00000639083 GAS2L2Q8NHY3 880 aa13.79□□□□□ -0.2
TARDBP-230ENST00000639083 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
TARDBP-230ENST00000639083 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
TARDBP-230ENST00000639083 NFAT5O94916 1531 aa13.78□□□□□ -0.2
TARDBP-230ENST00000639083 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
TARDBP-230ENST00000639083 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
TARDBP-230ENST00000639083 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
TARDBP-230ENST00000639083 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
TARDBP-230ENST00000639083 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
TARDBP-230ENST00000639083 MIS18AQ9NYP9 233 aa13.77□□□□□ -0.21
TARDBP-230ENST00000639083 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
TARDBP-230ENST00000639083 MST1RQ04912 1400 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms