RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
CLN6-215ENST00000636674 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
CLN6-215ENST00000636674 HSCBQ8IWL3 235 aa18.28■□□□□ 0.52
CLN6-215ENST00000636674 ZNF692Q9BU19 519 aaPredicted RBP18.28■□□□□ 0.52
CLN6-215ENST00000636674 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
CLN6-215ENST00000636674 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.52
CLN6-215ENST00000636674 FSD2A1L4K1 749 aa18.27■□□□□ 0.52
CLN6-215ENST00000636674 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
CLN6-215ENST00000636674 DDIT3P35638 169 aa18.27■□□□□ 0.52
CLN6-215ENST00000636674 HSPA2P54652 639 aa18.27■□□□□ 0.52
CLN6-215ENST00000636674 MON2Q7Z3U7 1717 aa18.27■□□□□ 0.52
CLN6-215ENST00000636674 CPSF1Q10570 1443 aaKnown RBP18.27■□□□□ 0.52
CLN6-215ENST00000636674 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
CLN6-215ENST00000636674 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.51
CLN6-215ENST00000636674 GCC1Q96CN9 775 aa18.27■□□□□ 0.51
CLN6-215ENST00000636674 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
CLN6-215ENST00000636674 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
CLN6-215ENST00000636674 A2ML1A8K2U0 1454 aa18.25■□□□□ 0.51
CLN6-215ENST00000636674 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
CLN6-215ENST00000636674 KNDC1Q76NI1 1749 aa18.25■□□□□ 0.51
CLN6-215ENST00000636674 TNRQ92752 1358 aa18.25■□□□□ 0.51
CLN6-215ENST00000636674 ABCC4O15439 1325 aa18.25■□□□□ 0.51
CLN6-215ENST00000636674 ZBTB7BO15156 539 aaPredicted RBP18.25■□□□□ 0.51
CLN6-215ENST00000636674 MRPL50Q8N5N7 158 aaKnown RBP18.25■□□□□ 0.51
CLN6-215ENST00000636674 VAMP4O75379 141 aa18.24■□□□□ 0.51
CLN6-215ENST00000636674 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
CLN6-215ENST00000636674 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
CLN6-215ENST00000636674 GNAI1P63096 354 aa18.23■□□□□ 0.51
CLN6-215ENST00000636674 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
CLN6-215ENST00000636674 STRCQ7RTU9 1775 aa18.23■□□□□ 0.51
CLN6-215ENST00000636674 DDX11L8A8MPP1 907 aa18.23■□□□□ 0.51
CLN6-215ENST00000636674 LNPKQ9C0E8 428 aa18.23■□□□□ 0.51
CLN6-215ENST00000636674 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
CLN6-215ENST00000636674 KIF24Q5T7B8 1368 aa18.23■□□□□ 0.51
CLN6-215ENST00000636674 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
CLN6-215ENST00000636674 NRKQ7Z2Y5 1582 aa18.22■□□□□ 0.51
CLN6-215ENST00000636674 GOLGA6L3A6NEY3 463 aa18.21■□□□□ 0.51
CLN6-215ENST00000636674 IL13P35225 146 aa18.21■□□□□ 0.51
CLN6-215ENST00000636674 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
CLN6-215ENST00000636674 RIMS2Q9UQ26 1411 aa18.2■□□□□ 0.5
CLN6-215ENST00000636674 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
CLN6-215ENST00000636674 SPRYD3Q8NCJ5 442 aa18.2■□□□□ 0.5
CLN6-215ENST00000636674 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
CLN6-215ENST00000636674 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
CLN6-215ENST00000636674 TRAK2O60296 914 aa18.19■□□□□ 0.5
CLN6-215ENST00000636674 XRCC6P12956 609 aaKnown RBP eCLIP18.18■□□□□ 0.5
CLN6-215ENST00000636674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.18■□□□□ 0.5
CLN6-215ENST00000636674 KIF2CQ99661 725 aa18.17■□□□□ 0.5
CLN6-215ENST00000636674 MBIPQ9NS73 344 aa18.17■□□□□ 0.5
CLN6-215ENST00000636674 TSPYL6Q8N831 410 aa18.16■□□□□ 0.5
CLN6-215ENST00000636674 CFAP44Q96MT7 982 aa18.16■□□□□ 0.5
CLN6-215ENST00000636674 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
CLN6-215ENST00000636674 TECPR2O15040 1411 aa18.16■□□□□ 0.5
CLN6-215ENST00000636674 CPS1P31327 1500 aa18.16■□□□□ 0.5
CLN6-215ENST00000636674 EIF5BO60841 1220 aaKnown RBP18.16■□□□□ 0.5
CLN6-215ENST00000636674 HMOX1P09601 288 aa18.16■□□□□ 0.5
CLN6-215ENST00000636674 ANKRD45Q5TZF3 282 aa18.16■□□□□ 0.5
CLN6-215ENST00000636674 SIRT2Q8IXJ6 389 aa18.16■□□□□ 0.5
CLN6-215ENST00000636674 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
CLN6-215ENST00000636674 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
CLN6-215ENST00000636674 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
CLN6-215ENST00000636674 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
CLN6-215ENST00000636674 TWISTNBQ3B726 338 aaPredicted RBP18.15■□□□□ 0.5
CLN6-215ENST00000636674 WAPLQ7Z5K2 1190 aa18.15■□□□□ 0.5
CLN6-215ENST00000636674 PTMSP20962 102 aa18.14■□□□□ 0.49
CLN6-215ENST00000636674 MRE11P49959 708 aa18.14■□□□□ 0.49
CLN6-215ENST00000636674 RAB3GAP1Q15042 981 aa18.14■□□□□ 0.49
CLN6-215ENST00000636674 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
CLN6-215ENST00000636674 PRKCSHP14314 528 aaPredicted RBP18.13■□□□□ 0.49
CLN6-215ENST00000636674 TBC1D9Q6ZT07 1266 aa18.13■□□□□ 0.49
CLN6-215ENST00000636674 FBLN1P23142 703 aa18.13■□□□□ 0.49
CLN6-215ENST00000636674 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
CLN6-215ENST00000636674 HSP90AB1P08238 724 aaKnown RBP18.12■□□□□ 0.49
CLN6-215ENST00000636674 SIRT1Q96EB6 747 aa18.12■□□□□ 0.49
CLN6-215ENST00000636674 NME9Q86XW9 330 aa18.11■□□□□ 0.49
CLN6-215ENST00000636674 TNPO1Q92973 898 aaKnown RBP18.11■□□□□ 0.49
CLN6-215ENST00000636674 GBP4Q96PP9 640 aa18.11■□□□□ 0.49
CLN6-215ENST00000636674 C1orf115Q9H7X2 142 aa18.11■□□□□ 0.49
CLN6-215ENST00000636674 RRAGDQ9NQL2 400 aaPredicted RBP18.11■□□□□ 0.49
CLN6-215ENST00000636674 CDC45O75419 566 aa18.11■□□□□ 0.49
CLN6-215ENST00000636674 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
CLN6-215ENST00000636674 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
CLN6-215ENST00000636674 C8orf58Q8NAV2 365 aa18.1■□□□□ 0.49
CLN6-215ENST00000636674 COG3Q96JB2 828 aa18.1■□□□□ 0.49
CLN6-215ENST00000636674 ATP10DQ9P241 1426 aa18.09■□□□□ 0.49
CLN6-215ENST00000636674 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
CLN6-215ENST00000636674 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
CLN6-215ENST00000636674 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
CLN6-215ENST00000636674 RGS12O14924 1447 aa18.09■□□□□ 0.49
CLN6-215ENST00000636674 SKOR2Q2VWA4 1001 aaPredicted RBP18.09■□□□□ 0.49
CLN6-215ENST00000636674 INTS3Q68E01 1043 aaKnown RBP18.09■□□□□ 0.49
CLN6-215ENST00000636674 GZF1Q9H116 711 aaPredicted RBP18.09■□□□□ 0.49
CLN6-215ENST00000636674 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.49
CLN6-215ENST00000636674 CLEC17AQ6ZS10 378 aa18.08■□□□□ 0.49
CLN6-215ENST00000636674 DCTPP1Q9H773 170 aa18.08■□□□□ 0.49
CLN6-215ENST00000636674 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.48
CLN6-215ENST00000636674 METP08581 1390 aa18.08■□□□□ 0.48
CLN6-215ENST00000636674 THEMISQ8N1K5 641 aaPredicted RBP18.07■□□□□ 0.48
CLN6-215ENST00000636674 PANK2Q9BZ23 570 aa18.07■□□□□ 0.48
CLN6-215ENST00000636674 GRPEL1Q9HAV7 217 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms