RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MMP14P50281 582 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 PIK3C2GO75747 1445 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 NINLQ9Y2I6 1382 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 ZNF445P59923 1031 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 TRAK1Q9UPV9 953 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
VPS11-207ENST00000620429 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
VPS11-207ENST00000620429 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
VPS11-207ENST00000620429 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
VPS11-207ENST00000620429 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
VPS11-207ENST00000620429 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
VPS11-207ENST00000620429 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
VPS11-207ENST00000620429 ASXL1Q8IXJ9 1541 aa12.81□□□□□ -0.36
VPS11-207ENST00000620429 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
VPS11-207ENST00000620429 CHMP4AQ9BY43 222 aa12.8□□□□□ -0.36
VPS11-207ENST00000620429 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
VPS11-207ENST00000620429 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
VPS11-207ENST00000620429 GABPB1Q06547 395 aaPredicted RBP12.79□□□□□ -0.36
VPS11-207ENST00000620429 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
VPS11-207ENST00000620429 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
VPS11-207ENST00000620429 ERVK-7P63135 1459 aa12.79□□□□□ -0.36
VPS11-207ENST00000620429 KCNJ4P48050 445 aa12.79□□□□□ -0.36
VPS11-207ENST00000620429 ZNF771Q7L3S4 317 aaPredicted RBP12.79□□□□□ -0.36
VPS11-207ENST00000620429 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS11-207ENST00000620429 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
VPS11-207ENST00000620429 HSCBQ8IWL3 235 aa12.78□□□□□ -0.36
VPS11-207ENST00000620429 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
VPS11-207ENST00000620429 TNRQ92752 1358 aa12.78□□□□□ -0.36
VPS11-207ENST00000620429 CCDC66A2RUB6 948 aa12.78□□□□□ -0.36
VPS11-207ENST00000620429 FEZ1Q99689 392 aa12.78□□□□□ -0.36
VPS11-207ENST00000620429 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
VPS11-207ENST00000620429 CLEC17AQ6ZS10 378 aa12.77□□□□□ -0.36
VPS11-207ENST00000620429 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.36
VPS11-207ENST00000620429 MYOM1P52179 1685 aa12.77□□□□□ -0.36
VPS11-207ENST00000620429 TULP2O00295 520 aa12.77□□□□□ -0.37
VPS11-207ENST00000620429 YY1AP1Q9H869 796 aa12.77□□□□□ -0.37
VPS11-207ENST00000620429 IDI1Q13907 227 aa12.76□□□□□ -0.37
VPS11-207ENST00000620429 C14orf93Q9H972 538 aaKnown RBP12.76□□□□□ -0.37
VPS11-207ENST00000620429 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
VPS11-207ENST00000620429 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
VPS11-207ENST00000620429 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
VPS11-207ENST00000620429 TSPYL1Q9H0U9 437 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 KIAA2012Q0VF49 1180 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 SNX21Q969T3 373 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
VPS11-207ENST00000620429 ILDR2Q71H61 639 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
VPS11-207ENST00000620429 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
VPS11-207ENST00000620429 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
VPS11-207ENST00000620429 TOM1O60784 492 aa12.74□□□□□ -0.37
VPS11-207ENST00000620429 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
VPS11-207ENST00000620429 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
VPS11-207ENST00000620429 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
VPS11-207ENST00000620429 OGFRQ9NZT2 677 aa12.74□□□□□ -0.37
VPS11-207ENST00000620429 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
VPS11-207ENST00000620429 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 PPLO60437 1756 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 UBAP1LF5GYI3 381 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 SAFB2Q14151 953 aaKnown RBP eCLIP12.73□□□□□ -0.37
VPS11-207ENST00000620429 ANKRD7Q92527 254 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 RBSNQ9H1K0 784 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 PDZRN3Q9UPQ7 1066 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
VPS11-207ENST00000620429 ZNF335Q9H4Z2 1342 aaPredicted RBP12.72□□□□□ -0.37
VPS11-207ENST00000620429 ADGRB1O14514 1584 aa12.72□□□□□ -0.37
VPS11-207ENST00000620429 CLGNO14967 610 aa12.72□□□□□ -0.37
VPS11-207ENST00000620429 IGSF3O75054 1194 aa12.72□□□□□ -0.37
VPS11-207ENST00000620429 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
VPS11-207ENST00000620429 SLC12A5Q9H2X9 1139 aa12.72□□□□□ -0.37
VPS11-207ENST00000620429 TSC1Q92574 1164 aa12.72□□□□□ -0.37
VPS11-207ENST00000620429 GEMIN8Q9NWZ8 242 aaKnown RBP12.72□□□□□ -0.37
VPS11-207ENST00000620429 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
VPS11-207ENST00000620429 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.37
VPS11-207ENST00000620429 SLFN14P0C7P3 912 aa12.71□□□□□ -0.37
VPS11-207ENST00000620429 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
VPS11-207ENST00000620429 PSEN1P49768 467 aa12.71□□□□□ -0.38
VPS11-207ENST00000620429 RPGRIP1LQ68CZ1 1315 aa12.71□□□□□ -0.38
VPS11-207ENST00000620429 CAPN2P17655 700 aa12.7□□□□□ -0.38
VPS11-207ENST00000620429 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
VPS11-207ENST00000620429 STK26Q9P289 416 aa12.7□□□□□ -0.38
VPS11-207ENST00000620429 TNNQ9UQP3 1299 aa12.7□□□□□ -0.38
VPS11-207ENST00000620429 RLBP1P12271 317 aa12.7□□□□□ -0.38
VPS11-207ENST00000620429 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
VPS11-207ENST00000620429 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
VPS11-207ENST00000620429 SLIT1O75093 1534 aa12.7□□□□□ -0.38
VPS11-207ENST00000620429 NEXMIFQ5QGS0 1516 aa12.69□□□□□ -0.38
VPS11-207ENST00000620429 U2AF2P26368 475 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS11-207ENST00000620429 ZSCAN23Q3MJ62 389 aa12.69□□□□□ -0.38
VPS11-207ENST00000620429 CALCOCO1Q9P1Z2 691 aa12.69□□□□□ -0.38
VPS11-207ENST00000620429 SETBP1Q9Y6X0 1596 aa12.69□□□□□ -0.38
VPS11-207ENST00000620429 UBR1Q8IWV7 1749 aa12.69□□□□□ -0.38
VPS11-207ENST00000620429 PIK3C2BO00750 1634 aa12.69□□□□□ -0.38
VPS11-207ENST00000620429 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
VPS11-207ENST00000620429 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms