RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 AEBP1Q8IUX7 1158 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 NEURL4Q96JN8 1562 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 ATAD2Q6PL18 1390 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 ZNF521Q96K83 1311 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 PRR36Q9H6K5 1346 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 PATL2C9JE40 543 aaKnown RBP7□□□□□ -1.29
CPNE4-214ENST00000617767 MYCNP04198 464 aaPredicted RBP7□□□□□ -1.29
CPNE4-214ENST00000617767 ABCF1Q8NE71 845 aaKnown RBP eCLIP7□□□□□ -1.29
CPNE4-214ENST00000617767 PANK2Q9BZ23 570 aa7□□□□□ -1.29
CPNE4-214ENST00000617767 XPCQ01831 940 aaPredicted RBP6.99□□□□□ -1.29
CPNE4-214ENST00000617767 LTV1Q96GA3 475 aaPredicted RBP6.99□□□□□ -1.29
CPNE4-214ENST00000617767 PHACTR3Q96KR7 559 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 POLKQ9UBT6 870 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 POLR3AO14802 1390 aaPredicted RBP6.99□□□□□ -1.29
CPNE4-214ENST00000617767 NPC1L1Q9UHC9 1359 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 TMEM2Q9UHN6 1383 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 FAM83GA6ND36 823 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 HDGFP51858 240 aaKnown RBP6.99□□□□□ -1.29
CPNE4-214ENST00000617767 LMOD2Q6P5Q4 547 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 NGDNQ8NEJ9 315 aaKnown RBP6.99□□□□□ -1.29
CPNE4-214ENST00000617767 COG3Q96JB2 828 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 MAP7D2Q96T17 732 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 HDAC5Q9UQL6 1122 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 CCDC61Q9Y6R9 512 aa6.99□□□□□ -1.29
CPNE4-214ENST00000617767 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 ESPNB1AK53 854 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 XRCC6P12956 609 aaKnown RBP eCLIP6.98□□□□□ -1.29
CPNE4-214ENST00000617767 EXOSC9Q06265 439 aaKnown RBP6.98□□□□□ -1.29
CPNE4-214ENST00000617767 PHF23Q9BUL5 403 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-214ENST00000617767 CD163L1Q9NR16 1453 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 MAP2P11137 1827 aaKnown RBP6.98□□□□□ -1.29
CPNE4-214ENST00000617767 ACEP12821 1306 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 PPP6R1Q9UPN7 881 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 ERBB4Q15303 1308 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 RLBP1P12271 317 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-214ENST00000617767 KCNA6P17658 529 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 TMPOP42166 694 aaKnown RBP6.98□□□□□ -1.29
CPNE4-214ENST00000617767 CHMP4CQ96CF2 233 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 ZFYVE9O95405 1425 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 SPATA31D1Q6ZQQ2 1576 aa6.98□□□□□ -1.29
CPNE4-214ENST00000617767 FAM193AP78312 1265 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.97□□□□□ -1.29
CPNE4-214ENST00000617767 NKTRP30414 1462 aaKnown RBP6.97□□□□□ -1.29
CPNE4-214ENST00000617767 APPP05067 770 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 SHPRHQ149N8 1683 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 AGLP35573 1532 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 NGEFQ8N5V2 710 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 BACH2Q9BYV9 841 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 SMC4Q9NTJ3 1288 aa6.97□□□□□ -1.29
CPNE4-214ENST00000617767 ZBTB9Q96C00 473 aa6.96□□□□□ -1.3
CPNE4-214ENST00000617767 MIS18AQ9NYP9 233 aa6.96□□□□□ -1.3
CPNE4-214ENST00000617767 TRIM35Q9UPQ4 493 aa6.96□□□□□ -1.3
CPNE4-214ENST00000617767 RARSP54136 660 aaKnown RBP6.95□□□□□ -1.3
CPNE4-214ENST00000617767 SULT6B1Q6IMI4 303 aa6.95□□□□□ -1.3
CPNE4-214ENST00000617767 NRXN3Q9Y4C0 1643 aa6.95□□□□□ -1.3
CPNE4-214ENST00000617767 IGHDP01880 384 aa6.95□□□□□ -1.3
CPNE4-214ENST00000617767 THEMISQ8N1K5 641 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-214ENST00000617767 CPS1P31327 1500 aa6.95□□□□□ -1.3
CPNE4-214ENST00000617767 KRT24Q2M2I5 525 aa6.95□□□□□ -1.3
CPNE4-214ENST00000617767 CGNQ9P2M7 1197 aaKnown RBP6.95□□□□□ -1.3
CPNE4-214ENST00000617767 KIF20AO95235 890 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 CFAP44Q96MT7 982 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 PLEKHF1Q96S99 279 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 PTPRUQ92729 1446 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 UBR1Q8IWV7 1749 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 ADAMTS13Q76LX8 1427 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 GOLGA6L3A6NEY3 463 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 NLRP6P59044 892 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 FAM43BQ6ZT52 329 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-214ENST00000617767 MCM10Q7L590 875 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 ITPRIPQ8IWB1 547 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
CPNE4-214ENST00000617767 USHBP1Q8N6Y0 703 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 TAOK2Q9UL54 1235 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 RGPD8O14715 1765 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-214ENST00000617767 FOXO3O43524 673 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 TSPYL6Q8N831 410 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 SSH1Q8WYL5 1049 aa6.94□□□□□ -1.3
CPNE4-214ENST00000617767 INSRP06213 1382 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 NECTIN2Q92692 538 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 MYH16Q9H6N6 1097 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 TTC21BQ7Z4L5 1316 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 FER1L4A9Z1Z3 1794 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 C3P01024 1663 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 CLGNO14967 610 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 C1orf115Q9H7X2 142 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 AMPHP49418 695 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 ESCO1Q5FWF5 840 aa6.93□□□□□ -1.3
CPNE4-214ENST00000617767 NOB1Q9ULX3 412 aaKnown RBP6.93□□□□□ -1.3
CPNE4-214ENST00000617767 NSD2O96028 1365 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 SETD1AO15047 1707 aaKnown RBP6.92□□□□□ -1.3
CPNE4-214ENST00000617767 NLRP1Q9C000 1473 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 ABTB2Q8N961 1025 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 REREQ9P2R6 1566 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 KIF20BQ96Q89 1820 aa6.92□□□□□ -1.3
CPNE4-214ENST00000617767 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.92□□□□□ -1.3
CPNE4-214ENST00000617767 LETM1O95202 739 aaPredicted RBP6.92□□□□□ -1.3
CPNE4-214ENST00000617767 EIF4A2Q14240 407 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms