RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 FCHSD2O94868 740 aa23.81■■□□□ 1.4
SNAPC3-207ENST00000610884 TRMT2AQ8IZ69 625 aaKnown RBP23.81■■□□□ 1.4
SNAPC3-207ENST00000610884 EXOC6Q8TAG9 804 aa23.81■■□□□ 1.4
SNAPC3-207ENST00000610884 RNF123Q5XPI4 1314 aa23.8■■□□□ 1.4
SNAPC3-207ENST00000610884 E9PSI1 815 aa23.79■■□□□ 1.4
SNAPC3-207ENST00000610884 PEAK1Q9H792 1746 aa23.79■■□□□ 1.4
SNAPC3-207ENST00000610884 STRCQ7RTU9 1775 aa23.79■■□□□ 1.4
SNAPC3-207ENST00000610884 KRT28Q7Z3Y7 464 aa23.79■■□□□ 1.4
SNAPC3-207ENST00000610884 LRRC7Q96NW7 1537 aa23.78■■□□□ 1.4
SNAPC3-207ENST00000610884 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
SNAPC3-207ENST00000610884 USP31Q70CQ4 1352 aa23.78■■□□□ 1.4
SNAPC3-207ENST00000610884 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
SNAPC3-207ENST00000610884 CABLES1Q8TDN4 633 aa23.77■■□□□ 1.4
SNAPC3-207ENST00000610884 CDK12Q9NYV4 1490 aaPredicted RBP23.77■■□□□ 1.4
SNAPC3-207ENST00000610884 C1orf167Q5SNV9 1468 aa23.76■■□□□ 1.39
SNAPC3-207ENST00000610884 NWD1Q149M9 1564 aa23.75■■□□□ 1.39
SNAPC3-207ENST00000610884 HOXC9P31274 260 aa23.73■■□□□ 1.39
SNAPC3-207ENST00000610884 EYA1Q99502 592 aa23.73■■□□□ 1.39
SNAPC3-207ENST00000610884 MSH5O43196 834 aa23.72■■□□□ 1.39
SNAPC3-207ENST00000610884 ZC3H6P61129 1189 aaKnown RBP23.72■■□□□ 1.39
SNAPC3-207ENST00000610884 PPP4R2Q9NY27 417 aa23.72■■□□□ 1.39
SNAPC3-207ENST00000610884 NEFMP07197 916 aa23.72■■□□□ 1.39
SNAPC3-207ENST00000610884 WDR63Q8IWG1 891 aa23.7■■□□□ 1.38
SNAPC3-207ENST00000610884 FRAT1Q92837 279 aaPredicted RBP23.7■■□□□ 1.38
SNAPC3-207ENST00000610884 CRBNQ96SW2 442 aa23.7■■□□□ 1.38
SNAPC3-207ENST00000610884 TNNQ9UQP3 1299 aa23.7■■□□□ 1.38
SNAPC3-207ENST00000610884 ELL2O00472 640 aaPredicted RBP23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 GCP02774 474 aa23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 EXOSC9Q06265 439 aaKnown RBP23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 MST1RQ04912 1400 aa23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 NFE2L2Q16236 605 aa23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 CCDC27Q2M243 656 aa23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 MCM10Q7L590 875 aa23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 LRRC59Q96AG4 307 aaKnown RBP23.69■■□□□ 1.38
SNAPC3-207ENST00000610884 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
SNAPC3-207ENST00000610884 MARF1Q9Y4F3 1742 aaKnown RBP23.68■■□□□ 1.38
SNAPC3-207ENST00000610884 FLT4P35916 1363 aa23.68■■□□□ 1.38
SNAPC3-207ENST00000610884 CADPS2Q86UW7 1296 aa23.68■■□□□ 1.38
SNAPC3-207ENST00000610884 SBNO1A3KN83 1393 aa23.67■■□□□ 1.38
SNAPC3-207ENST00000610884 MSH6P52701 1360 aa23.66■■□□□ 1.38
SNAPC3-207ENST00000610884 TCERG1O14776 1098 aaKnown RBP23.66■■□□□ 1.38
SNAPC3-207ENST00000610884 AXIN2Q9Y2T1 843 aa23.66■■□□□ 1.38
SNAPC3-207ENST00000610884 PNNQ9H307 717 aaKnown RBP23.66■■□□□ 1.38
SNAPC3-207ENST00000610884 CCDC136Q96JN2 1154 aa23.65■■□□□ 1.38
SNAPC3-207ENST00000610884 NGEFQ8N5V2 710 aa23.64■■□□□ 1.37
SNAPC3-207ENST00000610884 MIS18AQ9NYP9 233 aa23.64■■□□□ 1.37
SNAPC3-207ENST00000610884 MTHFSDQ2M296 383 aaKnown RBP23.63■■□□□ 1.37
SNAPC3-207ENST00000610884 ERICH6BQ5W0A0 696 aa23.63■■□□□ 1.37
SNAPC3-207ENST00000610884 BRINP3Q76B58 766 aa23.63■■□□□ 1.37
SNAPC3-207ENST00000610884 NBPF6Q5VWK0 638 aa23.62■■□□□ 1.37
SNAPC3-207ENST00000610884 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
SNAPC3-207ENST00000610884 NBPF4Q96M43 638 aa23.62■■□□□ 1.37
SNAPC3-207ENST00000610884 SLAIN2Q9P270 581 aa23.62■■□□□ 1.37
SNAPC3-207ENST00000610884 MYH16Q9H6N6 1097 aa23.62■■□□□ 1.37
SNAPC3-207ENST00000610884 RARSP54136 660 aaKnown RBP23.61■■□□□ 1.37
SNAPC3-207ENST00000610884 CHRNA2Q15822 529 aa23.61■■□□□ 1.37
SNAPC3-207ENST00000610884 PANK1Q8TE04 598 aa23.61■■□□□ 1.37
SNAPC3-207ENST00000610884 XIRP1Q702N8 1843 aaKnown RBP23.61■■□□□ 1.37
SNAPC3-207ENST00000610884 SKAP1Q86WV1 359 aa23.6■■□□□ 1.37
SNAPC3-207ENST00000610884 TSPYL6Q8N831 410 aa23.6■■□□□ 1.37
SNAPC3-207ENST00000610884 KRT24Q2M2I5 525 aa23.59■■□□□ 1.37
SNAPC3-207ENST00000610884 CANXP27824 592 aaKnown RBP23.59■■□□□ 1.37
SNAPC3-207ENST00000610884 IP6K1Q92551 441 aa23.58■■□□□ 1.37
SNAPC3-207ENST00000610884 MBIPQ9NS73 344 aa23.57■■□□□ 1.36
SNAPC3-207ENST00000610884 ARHGEF25Q86VW2 580 aa23.56■■□□□ 1.36
SNAPC3-207ENST00000610884 IGSF1Q8N6C5 1336 aa23.56■■□□□ 1.36
SNAPC3-207ENST00000610884 KCNH5Q8NCM2 988 aa23.56■■□□□ 1.36
SNAPC3-207ENST00000610884 DLG5Q8TDM6 1919 aa23.55■■□□□ 1.36
SNAPC3-207ENST00000610884 LTN1O94822 1766 aa23.55■■□□□ 1.36
SNAPC3-207ENST00000610884 COG6Q9Y2V7 657 aa23.54■■□□□ 1.36
SNAPC3-207ENST00000610884 RLBP1P12271 317 aa23.54■■□□□ 1.36
SNAPC3-207ENST00000610884 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
SNAPC3-207ENST00000610884 SSH1Q8WYL5 1049 aa23.54■■□□□ 1.36
SNAPC3-207ENST00000610884 NFAT5O94916 1531 aa23.53■■□□□ 1.36
SNAPC3-207ENST00000610884 BCL11AQ9H165 835 aa23.53■■□□□ 1.36
SNAPC3-207ENST00000610884 NPHP3Q7Z494 1330 aa23.53■■□□□ 1.36
SNAPC3-207ENST00000610884 C8orf58Q8NAV2 365 aa23.52■■□□□ 1.36
SNAPC3-207ENST00000610884 ANKRD24Q8TF21 1146 aa23.52■■□□□ 1.36
SNAPC3-207ENST00000610884 SMC4Q9NTJ3 1288 aa23.51■■□□□ 1.35
SNAPC3-207ENST00000610884 TRPM3Q9HCF6 1732 aaPredicted RBP23.5■■□□□ 1.35
SNAPC3-207ENST00000610884 RGPD1P0DJD0 1748 aa23.5■■□□□ 1.35
SNAPC3-207ENST00000610884 ARHGEF10O15013 1369 aa23.49■■□□□ 1.35
SNAPC3-207ENST00000610884 RGPD2P0DJD1 1756 aa23.49■■□□□ 1.35
SNAPC3-207ENST00000610884 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.48■■□□□ 1.35
SNAPC3-207ENST00000610884 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
SNAPC3-207ENST00000610884 USP19O94966 1318 aa23.47■■□□□ 1.35
SNAPC3-207ENST00000610884 DCCP43146 1447 aa23.47■■□□□ 1.35
SNAPC3-207ENST00000610884 SPATA31A3Q5VYP0 1347 aa23.47■■□□□ 1.35
SNAPC3-207ENST00000610884 CFAP44Q96MT7 982 aa23.47■■□□□ 1.35
SNAPC3-207ENST00000610884 KDRP35968 1356 aa23.46■■□□□ 1.35
SNAPC3-207ENST00000610884 IL16Q14005 1332 aa23.46■■□□□ 1.35
SNAPC3-207ENST00000610884 ZNF853P0CG23 659 aa23.45■■□□□ 1.35
SNAPC3-207ENST00000610884 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.35
SNAPC3-207ENST00000610884 GNAI1P63096 354 aa23.45■■□□□ 1.34
SNAPC3-207ENST00000610884 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.34
SNAPC3-207ENST00000610884 RTF1Q92541 710 aaKnown RBP23.45■■□□□ 1.34
SNAPC3-207ENST00000610884 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.34
SNAPC3-207ENST00000610884 NCOA3Q9Y6Q9 1424 aa23.45■■□□□ 1.34
SNAPC3-207ENST00000610884 LGR6Q9HBX8 967 aa23.44■■□□□ 1.34
SNAPC3-207ENST00000610884 IFT57Q9NWB7 429 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms