RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 CDK19Q9BWU1 502 aa21.57■■□□□ 1.04
ARHGEF1-213ENST00000595897 POGZQ7Z3K3 1410 aa21.56■■□□□ 1.04
ARHGEF1-213ENST00000595897 GNAI1P63096 354 aa21.56■■□□□ 1.04
ARHGEF1-213ENST00000595897 NEXMIFQ5QGS0 1516 aa21.56■■□□□ 1.04
ARHGEF1-213ENST00000595897 HSP90AA2PQ14568 343 aaPredicted RBP21.56■■□□□ 1.04
ARHGEF1-213ENST00000595897 MED14O60244 1454 aa21.56■■□□□ 1.04
ARHGEF1-213ENST00000595897 FRMPD1Q5SYB0 1578 aa21.55■■□□□ 1.04
ARHGEF1-213ENST00000595897 CFAP74Q9C0B2 1584 aa21.54■■□□□ 1.04
ARHGEF1-213ENST00000595897 POLKQ9UBT6 870 aa21.54■■□□□ 1.04
ARHGEF1-213ENST00000595897 HECW2Q9P2P5 1572 aa21.54■■□□□ 1.04
ARHGEF1-213ENST00000595897 NASPP49321 788 aaPredicted RBP21.54■■□□□ 1.04
ARHGEF1-213ENST00000595897 TWISTNBQ3B726 338 aaPredicted RBP21.54■■□□□ 1.04
ARHGEF1-213ENST00000595897 MLH3Q9UHC1 1453 aa21.53■■□□□ 1.04
ARHGEF1-213ENST00000595897 MBIPQ9NS73 344 aa21.53■■□□□ 1.04
ARHGEF1-213ENST00000595897 SLC52A1Q9NWF4 448 aa21.53■■□□□ 1.04
ARHGEF1-213ENST00000595897 ZFYVE9O95405 1425 aa21.53■■□□□ 1.04
ARHGEF1-213ENST00000595897 RAPGEF3O95398 923 aa21.53■■□□□ 1.04
ARHGEF1-213ENST00000595897 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.04
ARHGEF1-213ENST00000595897 IFT57Q9NWB7 429 aa21.52■■□□□ 1.04
ARHGEF1-213ENST00000595897 LRRC7Q96NW7 1537 aa21.52■■□□□ 1.04
ARHGEF1-213ENST00000595897 BAG4O95429 457 aaKnown RBP21.52■■□□□ 1.04
ARHGEF1-213ENST00000595897 NCLP19338 710 aaKnown RBP21.51■■□□□ 1.03
ARHGEF1-213ENST00000595897 FAM135BQ49AJ0 1406 aa21.51■■□□□ 1.03
ARHGEF1-213ENST00000595897 ABCC4O15439 1325 aa21.51■■□□□ 1.03
ARHGEF1-213ENST00000595897 CCDC173Q0VFZ6 552 aa21.51■■□□□ 1.03
ARHGEF1-213ENST00000595897 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
ARHGEF1-213ENST00000595897 KLHL40Q2TBA0 621 aa21.51■■□□□ 1.03
ARHGEF1-213ENST00000595897 PTCH1Q13635 1447 aa21.5■■□□□ 1.03
ARHGEF1-213ENST00000595897 GSPT1P15170 499 aaKnown RBP21.5■■□□□ 1.03
ARHGEF1-213ENST00000595897 RABEP1Q15276 862 aa21.5■■□□□ 1.03
ARHGEF1-213ENST00000595897 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
ARHGEF1-213ENST00000595897 YTHDC2Q9H6S0 1430 aaKnown RBP21.49■■□□□ 1.03
ARHGEF1-213ENST00000595897 MCTP1Q6DN14 999 aa21.49■■□□□ 1.03
ARHGEF1-213ENST00000595897 RRP9O43818 475 aaKnown RBP21.48■■□□□ 1.03
ARHGEF1-213ENST00000595897 PLEKHM2Q8IWE5 1019 aa21.48■■□□□ 1.03
ARHGEF1-213ENST00000595897 C8orf58Q8NAV2 365 aa21.48■■□□□ 1.03
ARHGEF1-213ENST00000595897 CFAP44Q96MT7 982 aa21.48■■□□□ 1.03
ARHGEF1-213ENST00000595897 PTPRMP28827 1452 aa21.48■■□□□ 1.03
ARHGEF1-213ENST00000595897 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
ARHGEF1-213ENST00000595897 NUCB2P80303 420 aa21.46■■□□□ 1.03
ARHGEF1-213ENST00000595897 CLEC17AQ6ZS10 378 aa21.46■■□□□ 1.03
ARHGEF1-213ENST00000595897 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
ARHGEF1-213ENST00000595897 SIGLEC1Q9BZZ2 1709 aa21.46■■□□□ 1.03
ARHGEF1-213ENST00000595897 LMOD3Q0VAK6 560 aa21.45■■□□□ 1.03
ARHGEF1-213ENST00000595897 APBB1O00213 710 aa21.45■■□□□ 1.02
ARHGEF1-213ENST00000595897 TTC22Q5TAA0 569 aa21.45■■□□□ 1.02
ARHGEF1-213ENST00000595897 C16orf71Q8IYS4 520 aaPredicted RBP21.45■■□□□ 1.02
ARHGEF1-213ENST00000595897 ZNF853P0CG23 659 aa21.45■■□□□ 1.02
ARHGEF1-213ENST00000595897 INTS3Q68E01 1043 aaKnown RBP21.45■■□□□ 1.02
ARHGEF1-213ENST00000595897 CAVIN1Q6NZI2 390 aaKnown RBP21.45■■□□□ 1.02
ARHGEF1-213ENST00000595897 DCTPP1Q9H773 170 aa21.44■■□□□ 1.02
ARHGEF1-213ENST00000595897 PIK3C2BO00750 1634 aa21.44■■□□□ 1.02
ARHGEF1-213ENST00000595897 FAM83GA6ND36 823 aa21.44■■□□□ 1.02
ARHGEF1-213ENST00000595897 MSNP26038 577 aaKnown RBP21.44■■□□□ 1.02
ARHGEF1-213ENST00000595897 CASC1Q6TDU7 716 aa21.44■■□□□ 1.02
ARHGEF1-213ENST00000595897 PPP1R9BQ96SB3 815 aa21.43■■□□□ 1.02
ARHGEF1-213ENST00000595897 ZSCAN30Q86W11 494 aa21.43■■□□□ 1.02
ARHGEF1-213ENST00000595897 DCTN1Q14203 1278 aa21.42■■□□□ 1.02
ARHGEF1-213ENST00000595897 USP26Q9BXU7 913 aa21.42■■□□□ 1.02
ARHGEF1-213ENST00000595897 IL13P35225 146 aa21.42■■□□□ 1.02
ARHGEF1-213ENST00000595897 ANKRD26Q9UPS8 1709 aa21.42■■□□□ 1.02
ARHGEF1-213ENST00000595897 WAPLQ7Z5K2 1190 aa21.42■■□□□ 1.02
ARHGEF1-213ENST00000595897 IBTKQ9P2D0 1353 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF1-213ENST00000595897 ST18O60284 1047 aa21.41■■□□□ 1.02
ARHGEF1-213ENST00000595897 PKP1Q13835 747 aa21.4■■□□□ 1.02
ARHGEF1-213ENST00000595897 OTUD7AQ8TE49 926 aaPredicted RBP21.4■■□□□ 1.02
ARHGEF1-213ENST00000595897 ARHGAP31Q2M1Z3 1444 aa21.4■■□□□ 1.02
ARHGEF1-213ENST00000595897 ZSCAN23Q3MJ62 389 aa21.39■■□□□ 1.02
ARHGEF1-213ENST00000595897 KIAA1211Q6ZU35 1233 aa21.39■■□□□ 1.02
ARHGEF1-213ENST00000595897 CDC42BPGQ6DT37 1551 aa21.39■■□□□ 1.02
ARHGEF1-213ENST00000595897 TPM2P07951 284 aa21.39■■□□□ 1.01
ARHGEF1-213ENST00000595897 NME9Q86XW9 330 aa21.39■■□□□ 1.01
ARHGEF1-213ENST00000595897 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
ARHGEF1-213ENST00000595897 ARHGEF40Q8TER5 1519 aa21.38■■□□□ 1.01
ARHGEF1-213ENST00000595897 SDSP20132 328 aa21.38■■□□□ 1.01
ARHGEF1-213ENST00000595897 ZNF445P59923 1031 aa21.38■■□□□ 1.01
ARHGEF1-213ENST00000595897 CWC22Q9HCG8 908 aaKnown RBP21.38■■□□□ 1.01
ARHGEF1-213ENST00000595897 LMBRD1Q9NUN5 540 aa21.38■■□□□ 1.01
ARHGEF1-213ENST00000595897 SMARCA5O60264 1052 aaPredicted RBP21.37■■□□□ 1.01
ARHGEF1-213ENST00000595897 PRPF40AO75400 957 aaKnown RBP21.37■■□□□ 1.01
ARHGEF1-213ENST00000595897 RRS1Q15050 365 aaKnown RBP21.37■■□□□ 1.01
ARHGEF1-213ENST00000595897 ANKRD44Q8N8A2 993 aa21.37■■□□□ 1.01
ARHGEF1-213ENST00000595897 FBXO31Q5XUX0 539 aaPredicted RBP21.37■■□□□ 1.01
ARHGEF1-213ENST00000595897 ZRANB1Q9UGI0 708 aa21.37■■□□□ 1.01
ARHGEF1-213ENST00000595897 REREQ9P2R6 1566 aa21.36■■□□□ 1.01
ARHGEF1-213ENST00000595897 RPAP2Q8IXW5 612 aaPredicted RBP21.36■■□□□ 1.01
ARHGEF1-213ENST00000595897 ZGPATQ8N5A5 531 aaKnown RBP21.36■■□□□ 1.01
ARHGEF1-213ENST00000595897 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
ARHGEF1-213ENST00000595897 REC8O95072 547 aa21.35■■□□□ 1.01
ARHGEF1-213ENST00000595897 COG3Q96JB2 828 aa21.35■■□□□ 1.01
ARHGEF1-213ENST00000595897 KIF24Q5T7B8 1368 aa21.34■■□□□ 1.01
ARHGEF1-213ENST00000595897 CYP2E1P05181 493 aaPredicted RBP21.34■■□□□ 1.01
ARHGEF1-213ENST00000595897 KRT24Q2M2I5 525 aa21.34■■□□□ 1.01
ARHGEF1-213ENST00000595897 CEP85Q6P2H3 762 aa21.34■■□□□ 1.01
ARHGEF1-213ENST00000595897 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
ARHGEF1-213ENST00000595897 AK9Q5TCS8 1911 aa21.33■■□□□ 1.01
ARHGEF1-213ENST00000595897 CLTCQ00610 1675 aaKnown RBP21.33■■□□□ 1.01
ARHGEF1-213ENST00000595897 KIF20BQ96Q89 1820 aa21.33■■□□□ 1.01
ARHGEF1-213ENST00000595897 RBSNQ9H1K0 784 aa21.33■■□□□ 1
ARHGEF1-213ENST00000595897 PRIM1P49642 420 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms