RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-216ENST00000582772 FXR1P51114 621 aaKnown RBP eCLIP8.4□□□□□ -1.06
MSI2-216ENST00000582772 UNC80Q8N2C7 3258 aa8.4□□□□□ -1.07
MSI2-216ENST00000582772 PIK3C2AO00443 1686 aa8.4□□□□□ -1.07
MSI2-216ENST00000582772 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.07
MSI2-216ENST00000582772 MEGF6O75095 1541 aa8.39□□□□□ -1.07
MSI2-216ENST00000582772 SSH2Q76I76 1423 aa8.39□□□□□ -1.07
MSI2-216ENST00000582772 ZNF827Q17R98 1081 aa8.39□□□□□ -1.07
MSI2-216ENST00000582772 PTF1AQ7RTS3 328 aa8.39□□□□□ -1.07
MSI2-216ENST00000582772 CREBZFQ9NS37 354 aa8.39□□□□□ -1.07
MSI2-216ENST00000582772 THRAP3Q9Y2W1 955 aaKnown RBP8.39□□□□□ -1.07
MSI2-216ENST00000582772 TRPM1Q7Z4N2 1603 aa8.39□□□□□ -1.07
MSI2-216ENST00000582772 NRXN1Q9ULB1 1477 aa8.38□□□□□ -1.07
MSI2-216ENST00000582772 RGPD8O14715 1765 aaPredicted RBP8.38□□□□□ -1.07
MSI2-216ENST00000582772 PSME1Q06323 249 aa8.38□□□□□ -1.07
MSI2-216ENST00000582772 KCPQ6ZWJ8 1503 aa8.38□□□□□ -1.07
MSI2-216ENST00000582772 LMO7Q8WWI1 1683 aa8.37□□□□□ -1.07
MSI2-216ENST00000582772 PNPLA7Q6ZV29 1317 aa8.37□□□□□ -1.07
MSI2-216ENST00000582772 KDM2BQ8NHM5 1336 aa8.37□□□□□ -1.07
MSI2-216ENST00000582772 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
MSI2-216ENST00000582772 MKI67P46013 3256 aaKnown RBP8.36□□□□□ -1.07
MSI2-216ENST00000582772 VCANP13611 3396 aa8.36□□□□□ -1.07
MSI2-216ENST00000582772 MNX1P50219 401 aaPredicted RBP8.36□□□□□ -1.07
MSI2-216ENST00000582772 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
MSI2-216ENST00000582772 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
MSI2-216ENST00000582772 NAIPQ13075 1403 aa8.36□□□□□ -1.07
MSI2-216ENST00000582772 SPTBN5Q9NRC6 3674 aaKnown RBP8.35□□□□□ -1.07
MSI2-216ENST00000582772 MKRN1Q9UHC7 482 aaKnown RBP8.35□□□□□ -1.07
MSI2-216ENST00000582772 CLTCL1P53675 1640 aa8.35□□□□□ -1.07
MSI2-216ENST00000582772 EEA1Q15075 1411 aa8.35□□□□□ -1.07
MSI2-216ENST00000582772 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.07
MSI2-216ENST00000582772 IFT172Q9UG01 1749 aa8.34□□□□□ -1.07
MSI2-216ENST00000582772 CFAP44Q96MT7 982 aa8.34□□□□□ -1.07
MSI2-216ENST00000582772 KIAA0232Q92628 1395 aa8.34□□□□□ -1.07
MSI2-216ENST00000582772 BTAF1O14981 1849 aa8.33□□□□□ -1.08
MSI2-216ENST00000582772 KIF13BQ9NQT8 1826 aa8.33□□□□□ -1.08
MSI2-216ENST00000582772 IGSF1Q8N6C5 1336 aa8.33□□□□□ -1.08
MSI2-216ENST00000582772 BRCA1P38398 1863 aaKnown RBP8.33□□□□□ -1.08
MSI2-216ENST00000582772 PRDM11Q9NQV5 511 aa8.33□□□□□ -1.08
MSI2-216ENST00000582772 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
MSI2-216ENST00000582772 LTBP1Q14766 1721 aa8.32□□□□□ -1.08
MSI2-216ENST00000582772 MCOLN1Q9GZU1 580 aa8.32□□□□□ -1.08
MSI2-216ENST00000582772 COL18A1P39060 1754 aa8.32□□□□□ -1.08
MSI2-216ENST00000582772 E9PCH4 1651 aa8.31□□□□□ -1.08
MSI2-216ENST00000582772 SBF1O95248 1867 aa8.31□□□□□ -1.08
MSI2-216ENST00000582772 MAP2K1Q02750 393 aaPredicted RBP8.3□□□□□ -1.08
MSI2-216ENST00000582772 RRAGCQ9HB90 399 aa8.3□□□□□ -1.08
MSI2-216ENST00000582772 USP35Q9P2H5 1018 aa8.3□□□□□ -1.08
MSI2-216ENST00000582772 SPATA31E1Q6ZUB1 1445 aa8.29□□□□□ -1.08
MSI2-216ENST00000582772 VEGFBP49765 207 aa8.29□□□□□ -1.08
MSI2-216ENST00000582772 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
MSI2-216ENST00000582772 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
MSI2-216ENST00000582772 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
MSI2-216ENST00000582772 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
MSI2-216ENST00000582772 MUC3AQ02505 3323 aa8.28□□□□□ -1.08
MSI2-216ENST00000582772 LMOD2Q6P5Q4 547 aa8.27□□□□□ -1.09
MSI2-216ENST00000582772 PHF8Q9UPP1 1060 aa8.27□□□□□ -1.09
MSI2-216ENST00000582772 ZC3H4Q9UPT8 1303 aaKnown RBP8.27□□□□□ -1.09
MSI2-216ENST00000582772 LY75O60449 1722 aa8.26□□□□□ -1.09
MSI2-216ENST00000582772 CASP8AP2Q9UKL3 1982 aa8.26□□□□□ -1.09
MSI2-216ENST00000582772 ANKRD30BQ9BXX2 1392 aa8.26□□□□□ -1.09
MSI2-216ENST00000582772 PLEKHG5O94827 1062 aa8.26□□□□□ -1.09
MSI2-216ENST00000582772 DDB1Q16531 1140 aa8.26□□□□□ -1.09
MSI2-216ENST00000582772 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
MSI2-216ENST00000582772 MARCH10Q8NA82 808 aaPredicted RBP8.26□□□□□ -1.09
MSI2-216ENST00000582772 CRB1P82279 1406 aa8.26□□□□□ -1.09
MSI2-216ENST00000582772 COL5A2P05997 1499 aaPredicted RBP8.26□□□□□ -1.09
MSI2-216ENST00000582772 RANBP2P49792 3224 aaKnown RBP8.24□□□□□ -1.09
MSI2-216ENST00000582772 VEGFAP15692 232 aaPredicted RBP8.24□□□□□ -1.09
MSI2-216ENST00000582772 SOX10P56693 466 aa8.24□□□□□ -1.09
MSI2-216ENST00000582772 SLC27A3Q5K4L6 730 aa8.24□□□□□ -1.09
MSI2-216ENST00000582772 N4BP2Q86UW6 1770 aaPredicted RBP8.23□□□□□ -1.09
MSI2-216ENST00000582772 NUTM2FA1L443 756 aa8.23□□□□□ -1.09
MSI2-216ENST00000582772 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
MSI2-216ENST00000582772 BRCA2P51587 3418 aa8.23□□□□□ -1.09
MSI2-216ENST00000582772 CPDO75976 1380 aa8.22□□□□□ -1.09
MSI2-216ENST00000582772 RASSF10A6NK89 507 aa8.22□□□□□ -1.09
MSI2-216ENST00000582772 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
MSI2-216ENST00000582772 SNX27Q96L92 541 aa8.22□□□□□ -1.09
MSI2-216ENST00000582772 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
MSI2-216ENST00000582772 PASKQ96RG2 1323 aa8.22□□□□□ -1.09
MSI2-216ENST00000582772 MYOM3Q5VTT5 1437 aa8.21□□□□□ -1.09
MSI2-216ENST00000582772 TRIOBPQ9H2D6 2365 aa8.21□□□□□ -1.09
MSI2-216ENST00000582772 ABCC6O95255 1503 aa8.21□□□□□ -1.1
MSI2-216ENST00000582772 EVA1CP58658 441 aa8.21□□□□□ -1.1
MSI2-216ENST00000582772 KDM6AO15550 1401 aaPredicted RBP8.2□□□□□ -1.1
MSI2-216ENST00000582772 ITSN1Q15811 1721 aa8.2□□□□□ -1.1
MSI2-216ENST00000582772 TIAM2Q8IVF5 1701 aa8.2□□□□□ -1.1
MSI2-216ENST00000582772 HOXD11P31277 338 aaPredicted RBP8.2□□□□□ -1.1
MSI2-216ENST00000582772 DGKZQ13574 1117 aa8.2□□□□□ -1.1
MSI2-216ENST00000582772 CDCA7Q9BWT1 371 aaPredicted RBP8.2□□□□□ -1.1
MSI2-216ENST00000582772 ANKARQ7Z5J8 1434 aa8.2□□□□□ -1.1
MSI2-216ENST00000582772 PLA2G5P39877 138 aa8.19□□□□□ -1.1
MSI2-216ENST00000582772 PRDM6Q9NQX0 595 aa8.19□□□□□ -1.1
MSI2-216ENST00000582772 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
MSI2-216ENST00000582772 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
MSI2-216ENST00000582772 PPLO60437 1756 aa8.18□□□□□ -1.1
MSI2-216ENST00000582772 COL23A1Q86Y22 540 aaPredicted RBP8.18□□□□□ -1.1
MSI2-216ENST00000582772 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
MSI2-216ENST00000582772 USP6P35125 1406 aa8.18□□□□□ -1.1
MSI2-216ENST00000582772 CA12O43570 354 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms