RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 IRX6P78412 446 aaPredicted RBP25.35■■□□□ 1.65
RPAIN-210ENST00000571613 PPP4R2Q9NY27 417 aa25.35■■□□□ 1.65
RPAIN-210ENST00000571613 RTL1A6NKG5 1358 aa25.35■■□□□ 1.65
RPAIN-210ENST00000571613 SOX12O15370 315 aa25.34■■□□□ 1.65
RPAIN-210ENST00000571613 HSP90AB2PQ58FF8 381 aa25.34■■□□□ 1.65
RPAIN-210ENST00000571613 HMOX1P09601 288 aa25.33■■□□□ 1.65
RPAIN-210ENST00000571613 KRT28Q7Z3Y7 464 aa25.33■■□□□ 1.65
RPAIN-210ENST00000571613 SPINK5Q9NQ38 1064 aaPredicted RBP25.33■■□□□ 1.65
RPAIN-210ENST00000571613 NFE2L2Q16236 605 aa25.32■■□□□ 1.64
RPAIN-210ENST00000571613 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.32■■□□□ 1.64
RPAIN-210ENST00000571613 PEAK1Q9H792 1746 aa25.32■■□□□ 1.64
RPAIN-210ENST00000571613 ARHGEF10O15013 1369 aa25.32■■□□□ 1.64
RPAIN-210ENST00000571613 CALD1Q05682 793 aaKnown RBP25.32■■□□□ 1.64
RPAIN-210ENST00000571613 LMOD3Q0VAK6 560 aa25.32■■□□□ 1.64
RPAIN-210ENST00000571613 NUTM2GQ5VZR2 741 aa25.32■■□□□ 1.64
RPAIN-210ENST00000571613 MARF1Q9Y4F3 1742 aaKnown RBP25.31■■□□□ 1.64
RPAIN-210ENST00000571613 TRIM35Q9UPQ4 493 aa25.31■■□□□ 1.64
RPAIN-210ENST00000571613 NPHP3Q7Z494 1330 aa25.29■■□□□ 1.64
RPAIN-210ENST00000571613 HOXC9P31274 260 aa25.28■■□□□ 1.64
RPAIN-210ENST00000571613 SULT6B1Q6IMI4 303 aa25.28■■□□□ 1.64
RPAIN-210ENST00000571613 CT47B1P0C2W7 299 aaPredicted RBP25.27■■□□□ 1.64
RPAIN-210ENST00000571613 RGPD1P0DJD0 1748 aa25.26■■□□□ 1.63
RPAIN-210ENST00000571613 TRPM3Q9HCF6 1732 aaPredicted RBP25.26■■□□□ 1.63
RPAIN-210ENST00000571613 ZNF335Q9H4Z2 1342 aaPredicted RBP25.26■■□□□ 1.63
RPAIN-210ENST00000571613 IP6K1Q92551 441 aa25.25■■□□□ 1.63
RPAIN-210ENST00000571613 PHACTR3Q96KR7 559 aa25.25■■□□□ 1.63
RPAIN-210ENST00000571613 USP19O94966 1318 aa25.25■■□□□ 1.63
RPAIN-210ENST00000571613 NFAT5O94916 1531 aa25.25■■□□□ 1.63
RPAIN-210ENST00000571613 SLIT3O75094 1523 aa25.24■■□□□ 1.63
RPAIN-210ENST00000571613 IGSF1Q8N6C5 1336 aa25.23■■□□□ 1.63
RPAIN-210ENST00000571613 KDRP35968 1356 aa25.23■■□□□ 1.63
RPAIN-210ENST00000571613 GCP02774 474 aa25.23■■□□□ 1.63
RPAIN-210ENST00000571613 XIRP1Q702N8 1843 aaKnown RBP25.22■■□□□ 1.63
RPAIN-210ENST00000571613 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
RPAIN-210ENST00000571613 PHRF1Q9P1Y6 1649 aaKnown RBP25.21■■□□□ 1.63
RPAIN-210ENST00000571613 LMOD2Q6P5Q4 547 aa25.2■■□□□ 1.63
RPAIN-210ENST00000571613 AEBP1Q8IUX7 1158 aa25.19■■□□□ 1.62
RPAIN-210ENST00000571613 EYA1Q99502 592 aa25.19■■□□□ 1.62
RPAIN-210ENST00000571613 FANCIQ9NVI1 1328 aa25.18■■□□□ 1.62
RPAIN-210ENST00000571613 ARHGEF25Q86VW2 580 aa25.17■■□□□ 1.62
RPAIN-210ENST00000571613 ALS2Q96Q42 1657 aa25.17■■□□□ 1.62
RPAIN-210ENST00000571613 SLAIN2Q9P270 581 aa25.17■■□□□ 1.62
RPAIN-210ENST00000571613 LTN1O94822 1766 aa25.16■■□□□ 1.62
RPAIN-210ENST00000571613 GNAI1P63096 354 aa25.16■■□□□ 1.62
RPAIN-210ENST00000571613 IFT57Q9NWB7 429 aa25.16■■□□□ 1.62
RPAIN-210ENST00000571613 TNS3Q68CZ2 1445 aa25.15■■□□□ 1.62
RPAIN-210ENST00000571613 BRINP3Q76B58 766 aa25.14■■□□□ 1.62
RPAIN-210ENST00000571613 GAS2L2Q8NHY3 880 aa25.14■■□□□ 1.62
RPAIN-210ENST00000571613 PXDNQ92626 1479 aa25.12■■□□□ 1.61
RPAIN-210ENST00000571613 PLIN1O60240 522 aa25.12■■□□□ 1.61
RPAIN-210ENST00000571613 RARSP54136 660 aaKnown RBP25.12■■□□□ 1.61
RPAIN-210ENST00000571613 ZNF428Q96B54 188 aa25.12■■□□□ 1.61
RPAIN-210ENST00000571613 SPATA31A3Q5VYP0 1347 aa25.12■■□□□ 1.61
RPAIN-210ENST00000571613 HTATSF1O43719 755 aaKnown RBP25.1■■□□□ 1.61
RPAIN-210ENST00000571613 TSR2Q969E8 191 aaKnown RBP25.1■■□□□ 1.61
RPAIN-210ENST00000571613 CFAP44Q96MT7 982 aa25.1■■□□□ 1.61
RPAIN-210ENST00000571613 PDE3AQ14432 1141 aa25.09■■□□□ 1.61
RPAIN-210ENST00000571613 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
RPAIN-210ENST00000571613 CCDC136Q96JN2 1154 aa25.09■■□□□ 1.61
RPAIN-210ENST00000571613 BCAR3O75815 825 aa25.08■■□□□ 1.61
RPAIN-210ENST00000571613 ZNF853P0CG23 659 aa25.08■■□□□ 1.61
RPAIN-210ENST00000571613 EXOSC9Q06265 439 aaKnown RBP25.08■■□□□ 1.61
RPAIN-210ENST00000571613 EXOC6Q8TAG9 804 aa25.08■■□□□ 1.61
RPAIN-210ENST00000571613 RTF1Q92541 710 aaKnown RBP25.07■■□□□ 1.6
RPAIN-210ENST00000571613 DLG5Q8TDM6 1919 aa25.07■■□□□ 1.6
RPAIN-210ENST00000571613 ZBTB7CA1YPR0 619 aa25.07■■□□□ 1.6
RPAIN-210ENST00000571613 SOS2Q07890 1332 aaPredicted RBP25.07■■□□□ 1.6
RPAIN-210ENST00000571613 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
RPAIN-210ENST00000571613 B4GALNT3Q6L9W6 998 aa25.06■■□□□ 1.6
RPAIN-210ENST00000571613 DDX17Q92841 729 aaKnown RBP25.06■■□□□ 1.6
RPAIN-210ENST00000571613 MTHFSDQ2M296 383 aaKnown RBP25.05■■□□□ 1.6
RPAIN-210ENST00000571613 MED1Q15648 1581 aaPredicted RBP25.05■■□□□ 1.6
RPAIN-210ENST00000571613 LAS1LQ9Y4W2 734 aaKnown RBP25.04■■□□□ 1.6
RPAIN-210ENST00000571613 ABCC6O95255 1503 aa25.04■■□□□ 1.6
RPAIN-210ENST00000571613 MS4A1P11836 297 aa25.04■■□□□ 1.6
RPAIN-210ENST00000571613 HAP1P54257 671 aaPredicted RBP25.04■■□□□ 1.6
RPAIN-210ENST00000571613 CRBNQ96SW2 442 aa25.04■■□□□ 1.6
RPAIN-210ENST00000571613 ALDH1L2Q3SY69 923 aa25.03■■□□□ 1.6
RPAIN-210ENST00000571613 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
RPAIN-210ENST00000571613 THUMPD2Q9BTF0 503 aaKnown RBP25.02■■□□□ 1.6
RPAIN-210ENST00000571613 NBPF6Q5VWK0 638 aa25.01■■□□□ 1.59
RPAIN-210ENST00000571613 NBPF4Q96M43 638 aa25.01■■□□□ 1.59
RPAIN-210ENST00000571613 FAM83GA6ND36 823 aa25.01■■□□□ 1.59
RPAIN-210ENST00000571613 NCAPD2Q15021 1401 aa25■■□□□ 1.59
RPAIN-210ENST00000571613 CPDO75976 1380 aa25■■□□□ 1.59
RPAIN-210ENST00000571613 MBIPQ9NS73 344 aa25■■□□□ 1.59
RPAIN-210ENST00000571613 GNAT3A8MTJ3 354 aa24.99■■□□□ 1.59
RPAIN-210ENST00000571613 ZC3H6P61129 1189 aaKnown RBP24.99■■□□□ 1.59
RPAIN-210ENST00000571613 AAMPQ13685 434 aa24.99■■□□□ 1.59
RPAIN-210ENST00000571613 C20orf194Q5TEA3 1177 aa24.99■■□□□ 1.59
RPAIN-210ENST00000571613 AMOTQ4VCS5 1084 aa24.98■■□□□ 1.59
RPAIN-210ENST00000571613 SMC4Q9NTJ3 1288 aa24.98■■□□□ 1.59
RPAIN-210ENST00000571613 CHL1O00533 1208 aa24.97■■□□□ 1.59
RPAIN-210ENST00000571613 DCTN1Q14203 1278 aa24.97■■□□□ 1.59
RPAIN-210ENST00000571613 ERBB3P21860 1342 aa24.97■■□□□ 1.59
RPAIN-210ENST00000571613 PLEKHG5O94827 1062 aa24.97■■□□□ 1.59
RPAIN-210ENST00000571613 BRPF1P55201 1214 aaPredicted RBP24.97■■□□□ 1.59
RPAIN-210ENST00000571613 FRAT1Q92837 279 aaPredicted RBP24.97■■□□□ 1.59
RPAIN-210ENST00000571613 KIF16BQ96L93 1317 aa24.96■■□□□ 1.59
RPAIN-210ENST00000571613 IPO8O15397 1037 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms