RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
CNOT1-222ENST00000570139 FAM196BA6NMK8 535 aa10.7□□□□□ -0.7
CNOT1-222ENST00000570139 RNF40O75150 1001 aa10.7□□□□□ -0.7
CNOT1-222ENST00000570139 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
CNOT1-222ENST00000570139 UGGT2Q9NYU1 1516 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 NUP160Q12769 1436 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 SKIP12755 728 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 LAPTM4BQ86VI4 370 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 TXNDC2Q86VQ3 553 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 FKBPLQ9UIM3 349 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 CHD1O14646 1710 aa10.69□□□□□ -0.7
CNOT1-222ENST00000570139 ARID4AP29374 1257 aaPredicted RBP10.68□□□□□ -0.7
CNOT1-222ENST00000570139 MORN1Q5T089 497 aa10.68□□□□□ -0.7
CNOT1-222ENST00000570139 STK32AQ8WU08 396 aa10.68□□□□□ -0.7
CNOT1-222ENST00000570139 PRR14Q9BWN1 585 aa10.68□□□□□ -0.7
CNOT1-222ENST00000570139 CHMP7Q8WUX9 453 aaPredicted RBP10.67□□□□□ -0.7
CNOT1-222ENST00000570139 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
CNOT1-222ENST00000570139 CEP170Q5SW79 1584 aa10.67□□□□□ -0.7
CNOT1-222ENST00000570139 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
CNOT1-222ENST00000570139 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
CNOT1-222ENST00000570139 PIK3CDO00329 1044 aa10.66□□□□□ -0.7
CNOT1-222ENST00000570139 ARHGAP33O14559 1287 aa10.66□□□□□ -0.7
CNOT1-222ENST00000570139 IGSF3O75054 1194 aa10.66□□□□□ -0.7
CNOT1-222ENST00000570139 LARP1Q6PKG0 1096 aaKnown RBP10.66□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L15C9J2P7 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L13C9JLJ4 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L12C9JPN9 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L11C9JVI0 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L21D6R901 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L18D6R9N7 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L22D6RA61 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L17D6RBQ6 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L19D6RCP7 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L20D6RJB6 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 LZTS3O60299 673 aaPredicted RBP10.65□□□□□ -0.7
CNOT1-222ENST00000570139 PSEN2P49810 448 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 MCCD1P59942 119 aaPredicted RBP10.65□□□□□ -0.7
CNOT1-222ENST00000570139 USP17L24Q0WX57 530 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
CNOT1-222ENST00000570139 ATP5J2-PTCD1G3V325 749 aa10.64□□□□□ -0.71
CNOT1-222ENST00000570139 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
CNOT1-222ENST00000570139 FYCO1Q9BQS8 1478 aa10.63□□□□□ -0.71
CNOT1-222ENST00000570139 KIAA0556O60303 1618 aa10.63□□□□□ -0.71
CNOT1-222ENST00000570139 ACTN4O43707 911 aaKnown RBP10.63□□□□□ -0.71
CNOT1-222ENST00000570139 SSFA2P28290 1259 aa10.63□□□□□ -0.71
CNOT1-222ENST00000570139 SLFNL1Q499Z3 407 aa10.63□□□□□ -0.71
CNOT1-222ENST00000570139 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
CNOT1-222ENST00000570139 USB1Q9BQ65 265 aaKnown RBP10.63□□□□□ -0.71
CNOT1-222ENST00000570139 MKRN1Q9UHC7 482 aaKnown RBP10.63□□□□□ -0.71
CNOT1-222ENST00000570139 RASA1P20936 1047 aa10.62□□□□□ -0.71
CNOT1-222ENST00000570139 PHLDB3Q6NSJ2 640 aa10.62□□□□□ -0.71
CNOT1-222ENST00000570139 CLP1Q92989 425 aaKnown RBP10.62□□□□□ -0.71
CNOT1-222ENST00000570139 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
CNOT1-222ENST00000570139 GPSM3Q9Y4H4 160 aa10.62□□□□□ -0.71
CNOT1-222ENST00000570139 F12P00748 615 aaPredicted RBP10.61□□□□□ -0.71
CNOT1-222ENST00000570139 PTPRNQ16849 979 aa10.61□□□□□ -0.71
CNOT1-222ENST00000570139 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
CNOT1-222ENST00000570139 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
CNOT1-222ENST00000570139 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
CNOT1-222ENST00000570139 CARMIL2Q6F5E8 1435 aa10.6□□□□□ -0.71
CNOT1-222ENST00000570139 PTK7Q13308 1070 aa10.6□□□□□ -0.71
CNOT1-222ENST00000570139 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
CNOT1-222ENST00000570139 CRTC2Q53ET0 693 aaPredicted RBP10.6□□□□□ -0.71
CNOT1-222ENST00000570139 DEPDC4Q8N2C3 294 aa10.6□□□□□ -0.71
CNOT1-222ENST00000570139 ARMC2Q8NEN0 867 aa10.6□□□□□ -0.71
CNOT1-222ENST00000570139 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
CNOT1-222ENST00000570139 PBX2P40425 430 aa10.59□□□□□ -0.71
CNOT1-222ENST00000570139 SWI5Q1ZZU3 235 aa10.59□□□□□ -0.71
CNOT1-222ENST00000570139 FAM174AQ8TBP5 190 aa10.59□□□□□ -0.71
CNOT1-222ENST00000570139 GPKOWQ92917 476 aaPredicted RBP eCLIP10.59□□□□□ -0.71
CNOT1-222ENST00000570139 VPS9D1Q9Y2B5 631 aa10.59□□□□□ -0.71
CNOT1-222ENST00000570139 PCF11O94913 1555 aaKnown RBP10.59□□□□□ -0.71
CNOT1-222ENST00000570139 FHOD3Q2V2M9 1422 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 HECW1Q76N89 1606 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 PTK2Q05397 1052 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 NCOA4Q13772 614 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 RNF135Q8IUD6 432 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 CEP126Q9P2H0 1117 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 DISP1Q96F81 1524 aa10.58□□□□□ -0.72
CNOT1-222ENST00000570139 SOWAHDA6NJG2 315 aa10.57□□□□□ -0.72
CNOT1-222ENST00000570139 MAP7D1Q3KQU3 841 aa10.57□□□□□ -0.72
CNOT1-222ENST00000570139 DNAJC14Q6Y2X3 702 aaPredicted RBP10.57□□□□□ -0.72
CNOT1-222ENST00000570139 RNF19BQ6ZMZ0 732 aa10.57□□□□□ -0.72
CNOT1-222ENST00000570139 ANKMY2Q8IV38 441 aa10.57□□□□□ -0.72
CNOT1-222ENST00000570139 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
CNOT1-222ENST00000570139 ZFRQ96KR1 1074 aaKnown RBP10.57□□□□□ -0.72
CNOT1-222ENST00000570139 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 CCDC18Q5T9S5 1454 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 JUNDP17535 347 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 ATP2B4P23634 1241 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 EML3Q32P44 896 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 PDXDC2PQ6P474 469 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
CNOT1-222ENST00000570139 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms