RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 VSIG10Q8N0Z9 540 aa19.49■□□□□ 0.71
COMMD4-215ENST00000566843 GAS2L2Q8NHY3 880 aa19.49■□□□□ 0.71
COMMD4-215ENST00000566843 CDC42BPGQ6DT37 1551 aa19.49■□□□□ 0.71
COMMD4-215ENST00000566843 PTCH1Q13635 1447 aa19.48■□□□□ 0.71
COMMD4-215ENST00000566843 ANKRD45Q5TZF3 282 aa19.48■□□□□ 0.71
COMMD4-215ENST00000566843 ZSCAN30Q86W11 494 aa19.48■□□□□ 0.71
COMMD4-215ENST00000566843 ARHGAP45Q92619 1136 aa19.48■□□□□ 0.71
COMMD4-215ENST00000566843 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
COMMD4-215ENST00000566843 NASPP49321 788 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-215ENST00000566843 CABP2Q9NPB3 220 aa19.48■□□□□ 0.71
COMMD4-215ENST00000566843 BAG4O95429 457 aaKnown RBP19.47■□□□□ 0.71
COMMD4-215ENST00000566843 ESF1Q9H501 851 aaKnown RBP19.47■□□□□ 0.71
COMMD4-215ENST00000566843 CLTCQ00610 1675 aaKnown RBP19.47■□□□□ 0.71
COMMD4-215ENST00000566843 ZMYND15Q9H091 742 aa19.46■□□□□ 0.71
COMMD4-215ENST00000566843 PIK3C2BO00750 1634 aa19.46■□□□□ 0.71
COMMD4-215ENST00000566843 ZNF445P59923 1031 aa19.46■□□□□ 0.71
COMMD4-215ENST00000566843 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
COMMD4-215ENST00000566843 OFD1O75665 1012 aa19.45■□□□□ 0.7
COMMD4-215ENST00000566843 FOXD4L1Q9NU39 408 aa19.45■□□□□ 0.7
COMMD4-215ENST00000566843 TERF1P54274 439 aa19.45■□□□□ 0.7
COMMD4-215ENST00000566843 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
COMMD4-215ENST00000566843 NEXMIFQ5QGS0 1516 aa19.45■□□□□ 0.7
COMMD4-215ENST00000566843 DIAPH1O60610 1272 aaKnown RBP19.44■□□□□ 0.7
COMMD4-215ENST00000566843 CDC45O75419 566 aa19.44■□□□□ 0.7
COMMD4-215ENST00000566843 MRPL50Q8N5N7 158 aaKnown RBP19.44■□□□□ 0.7
COMMD4-215ENST00000566843 FYB1O15117 783 aa19.43■□□□□ 0.7
COMMD4-215ENST00000566843 HS1BP3Q53T59 392 aa19.43■□□□□ 0.7
COMMD4-215ENST00000566843 SIRT2Q8IXJ6 389 aa19.43■□□□□ 0.7
COMMD4-215ENST00000566843 PDCL3Q9H2J4 239 aa19.43■□□□□ 0.7
COMMD4-215ENST00000566843 DDX49Q9Y6V7 483 aaKnown RBP19.43■□□□□ 0.7
COMMD4-215ENST00000566843 FCHSD2O94868 740 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 KIAA1211Q6ZU35 1233 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 ANP32BQ92688 251 aaKnown RBP19.42■□□□□ 0.7
COMMD4-215ENST00000566843 CD163L1Q9NR16 1453 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 CYP2E1P05181 493 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-215ENST00000566843 IDI1Q13907 227 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 RABEP1Q15276 862 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 LRRC7Q96NW7 1537 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
COMMD4-215ENST00000566843 ABCC4O15439 1325 aa19.41■□□□□ 0.7
COMMD4-215ENST00000566843 VAMP4O75379 141 aa19.41■□□□□ 0.7
COMMD4-215ENST00000566843 CFAP44Q96MT7 982 aa19.41■□□□□ 0.7
COMMD4-215ENST00000566843 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-215ENST00000566843 ATAD2Q6PL18 1390 aa19.4■□□□□ 0.7
COMMD4-215ENST00000566843 NUCB2P80303 420 aa19.4■□□□□ 0.7
COMMD4-215ENST00000566843 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.4■□□□□ 0.7
COMMD4-215ENST00000566843 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.7
COMMD4-215ENST00000566843 TERF2IPQ9NYB0 399 aa19.39■□□□□ 0.69
COMMD4-215ENST00000566843 C1orf115Q9H7X2 142 aa19.38■□□□□ 0.69
COMMD4-215ENST00000566843 LMBRD1Q9NUN5 540 aa19.38■□□□□ 0.69
COMMD4-215ENST00000566843 GSPT1P15170 499 aaKnown RBP19.37■□□□□ 0.69
COMMD4-215ENST00000566843 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
COMMD4-215ENST00000566843 PDLIM2Q96JY6 352 aa19.37■□□□□ 0.69
COMMD4-215ENST00000566843 KIF24Q5T7B8 1368 aa19.37■□□□□ 0.69
COMMD4-215ENST00000566843 MSNP26038 577 aaKnown RBP19.37■□□□□ 0.69
COMMD4-215ENST00000566843 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
COMMD4-215ENST00000566843 PLEKHM2Q8IWE5 1019 aa19.36■□□□□ 0.69
COMMD4-215ENST00000566843 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
COMMD4-215ENST00000566843 CEBPAP49715 358 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-215ENST00000566843 AK9Q5TCS8 1911 aa19.35■□□□□ 0.69
COMMD4-215ENST00000566843 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
COMMD4-215ENST00000566843 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
COMMD4-215ENST00000566843 ZSCAN23Q3MJ62 389 aa19.35■□□□□ 0.69
COMMD4-215ENST00000566843 CWC22Q9HCG8 908 aaKnown RBP19.35■□□□□ 0.69
COMMD4-215ENST00000566843 PTPRMP28827 1452 aa19.35■□□□□ 0.69
COMMD4-215ENST00000566843 ZNF500O60304 480 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-215ENST00000566843 ZNF853P0CG23 659 aa19.35■□□□□ 0.69
COMMD4-215ENST00000566843 NFE2L2Q16236 605 aa19.35■□□□□ 0.69
COMMD4-215ENST00000566843 NUTM2DQ5VT03 806 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-215ENST00000566843 MCTP1Q6DN14 999 aa19.35■□□□□ 0.69
COMMD4-215ENST00000566843 USP26Q9BXU7 913 aa19.35■□□□□ 0.69
COMMD4-215ENST00000566843 NOL7Q9UMY1 257 aaKnown RBP19.35■□□□□ 0.69
COMMD4-215ENST00000566843 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
COMMD4-215ENST00000566843 KNDC1Q76NI1 1749 aa19.34■□□□□ 0.69
COMMD4-215ENST00000566843 PRKAR2BP31323 418 aa19.34■□□□□ 0.69
COMMD4-215ENST00000566843 GNAI1P63096 354 aa19.33■□□□□ 0.68
COMMD4-215ENST00000566843 TTC22Q5TAA0 569 aa19.33■□□□□ 0.68
COMMD4-215ENST00000566843 TSPYL6Q8N831 410 aa19.33■□□□□ 0.68
COMMD4-215ENST00000566843 DCTPP1Q9H773 170 aa19.33■□□□□ 0.68
COMMD4-215ENST00000566843 RBSNQ9H1K0 784 aa19.32■□□□□ 0.68
COMMD4-215ENST00000566843 CAVIN1Q6NZI2 390 aaKnown RBP19.32■□□□□ 0.68
COMMD4-215ENST00000566843 API5Q9BZZ5 524 aaKnown RBP19.32■□□□□ 0.68
COMMD4-215ENST00000566843 SAFB2Q14151 953 aaKnown RBP eCLIP19.31■□□□□ 0.68
COMMD4-215ENST00000566843 SPATA31D1Q6ZQQ2 1576 aa19.31■□□□□ 0.68
COMMD4-215ENST00000566843 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.31■□□□□ 0.68
COMMD4-215ENST00000566843 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-215ENST00000566843 STAG3Q9UJ98 1225 aa19.3■□□□□ 0.68
COMMD4-215ENST00000566843 HDGFL2Q7Z4V5 671 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-215ENST00000566843 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
COMMD4-215ENST00000566843 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
COMMD4-215ENST00000566843 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
COMMD4-215ENST00000566843 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
COMMD4-215ENST00000566843 MCM5P33992 734 aa19.28■□□□□ 0.68
COMMD4-215ENST00000566843 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
COMMD4-215ENST00000566843 PKP1Q13835 747 aa19.27■□□□□ 0.68
COMMD4-215ENST00000566843 GPT2Q8TD30 523 aa19.27■□□□□ 0.68
COMMD4-215ENST00000566843 POLKQ9UBT6 870 aa19.27■□□□□ 0.68
COMMD4-215ENST00000566843 NCLP19338 710 aaKnown RBP19.27■□□□□ 0.68
COMMD4-215ENST00000566843 TWISTNBQ3B726 338 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 547.3 ms