RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.05
AC055855.3-201ENST00000564269 GGCXP38435 758 aa8.46□□□□□ -1.06
AC055855.3-201ENST00000564269 THEMISQ8N1K5 641 aaPredicted RBP8.46□□□□□ -1.06
AC055855.3-201ENST00000564269 PHOX2BQ99453 314 aa8.46□□□□□ -1.06
AC055855.3-201ENST00000564269 CEP162Q5TB80 1403 aa8.46□□□□□ -1.06
AC055855.3-201ENST00000564269 MIA2Q96PC5 1412 aa8.46□□□□□ -1.06
AC055855.3-201ENST00000564269 PZPP20742 1482 aa8.45□□□□□ -1.06
AC055855.3-201ENST00000564269 CPS1P31327 1500 aa8.45□□□□□ -1.06
AC055855.3-201ENST00000564269 TIAM1Q13009 1591 aa8.45□□□□□ -1.06
AC055855.3-201ENST00000564269 RSPH4AQ5TD94 716 aa8.45□□□□□ -1.06
AC055855.3-201ENST00000564269 NEURL4Q96JN8 1562 aa8.44□□□□□ -1.06
AC055855.3-201ENST00000564269 Q6ZNB5 142 aa8.44□□□□□ -1.06
AC055855.3-201ENST00000564269 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
AC055855.3-201ENST00000564269 V9GY48 417 aaPredicted RBP8.44□□□□□ -1.06
AC055855.3-201ENST00000564269 ADGBQ8N7X0 1667 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 GFRA3O60609 400 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 PUS10Q3MIT2 529 aaKnown RBP8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 RDH13Q8NBN7 331 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 MED14O60244 1454 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 CCDC141Q6ZP82 1450 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 EHBP1L1Q8N3D4 1523 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 KDM5DQ9BY66 1539 aa8.43□□□□□ -1.06
AC055855.3-201ENST00000564269 DDX11L8A8MPP1 907 aa8.42□□□□□ -1.06
AC055855.3-201ENST00000564269 NPHP4O75161 1426 aaPredicted RBP8.42□□□□□ -1.06
AC055855.3-201ENST00000564269 NLRP1Q9C000 1473 aa8.42□□□□□ -1.06
AC055855.3-201ENST00000564269 FAM135AQ9P2D6 1515 aa8.42□□□□□ -1.06
AC055855.3-201ENST00000564269 MED1Q15648 1581 aaPredicted RBP8.42□□□□□ -1.06
AC055855.3-201ENST00000564269 VWDEQ8N2E2 1590 aa8.42□□□□□ -1.06
AC055855.3-201ENST00000564269 ALKQ9UM73 1620 aa8.41□□□□□ -1.06
AC055855.3-201ENST00000564269 UGGT1Q9NYU2 1555 aa8.41□□□□□ -1.06
AC055855.3-201ENST00000564269 PPEF1O14829 653 aaPredicted RBP8.41□□□□□ -1.06
AC055855.3-201ENST00000564269 NR1I2O75469 434 aa8.41□□□□□ -1.06
AC055855.3-201ENST00000564269 S1PR4O95977 384 aa8.41□□□□□ -1.06
AC055855.3-201ENST00000564269 TSPY4P0CV99 314 aa8.41□□□□□ -1.06
AC055855.3-201ENST00000564269 TSPY10P0CW01 314 aa8.41□□□□□ -1.06
AC055855.3-201ENST00000564269 CAMSAP2Q08AD1 1489 aa8.4□□□□□ -1.06
AC055855.3-201ENST00000564269 NCOA2Q15596 1464 aa8.4□□□□□ -1.06
AC055855.3-201ENST00000564269 ADH1BP00325 375 aa8.4□□□□□ -1.06
AC055855.3-201ENST00000564269 SCUBE3Q8IX30 993 aa8.4□□□□□ -1.06
AC055855.3-201ENST00000564269 EMID1Q96A84 441 aaPredicted RBP8.4□□□□□ -1.06
AC055855.3-201ENST00000564269 LRRC7Q96NW7 1537 aa8.39□□□□□ -1.07
AC055855.3-201ENST00000564269 FUT2Q10981 343 aa8.38□□□□□ -1.07
AC055855.3-201ENST00000564269 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
AC055855.3-201ENST00000564269 DEPDC5O75140 1603 aa8.38□□□□□ -1.07
AC055855.3-201ENST00000564269 TULP1O00294 542 aaPredicted RBP8.37□□□□□ -1.07
AC055855.3-201ENST00000564269 LCE2BO14633 110 aa8.37□□□□□ -1.07
AC055855.3-201ENST00000564269 LTKP29376 864 aa8.37□□□□□ -1.07
AC055855.3-201ENST00000564269 MAP2K5Q13163 448 aa8.37□□□□□ -1.07
AC055855.3-201ENST00000564269 POLR1AO95602 1720 aaPredicted RBP8.37□□□□□ -1.07
AC055855.3-201ENST00000564269 ARHGEF5Q12774 1597 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 ABCC3O15438 1527 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 NRG2O14511 850 aaPredicted RBP8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 SLC19A1P41440 591 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 GCGRP47871 477 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 MORN1Q5T089 497 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 SULF1Q8IWU6 871 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 ANKLE1Q8NAG6 615 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 SLC6A16Q9GZN6 736 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 RGS17Q9UGC6 210 aaPredicted RBP8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 ERVK-7P63135 1459 aa8.36□□□□□ -1.07
AC055855.3-201ENST00000564269 TXNDC2Q86VQ3 553 aa8.35□□□□□ -1.07
AC055855.3-201ENST00000564269 SPSB2Q99619 263 aa8.35□□□□□ -1.07
AC055855.3-201ENST00000564269 IRF6O14896 467 aa8.34□□□□□ -1.07
AC055855.3-201ENST00000564269 ATP6V1AP38606 617 aa8.34□□□□□ -1.07
AC055855.3-201ENST00000564269 PLA2G2CQ5R387 149 aa8.34□□□□□ -1.07
AC055855.3-201ENST00000564269 KANK4Q5T7N3 995 aaPredicted RBP8.34□□□□□ -1.07
AC055855.3-201ENST00000564269 LIAT1Q6ZQX7 453 aa8.34□□□□□ -1.07
AC055855.3-201ENST00000564269 IQGAP1P46940 1657 aa8.34□□□□□ -1.08
AC055855.3-201ENST00000564269 LRRC9Q6ZRR7 1453 aa8.33□□□□□ -1.08
AC055855.3-201ENST00000564269 SCAF11Q99590 1463 aaKnown RBP8.33□□□□□ -1.08
AC055855.3-201ENST00000564269 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
AC055855.3-201ENST00000564269 RNF17Q9BXT8 1623 aaKnown RBP8.33□□□□□ -1.08
AC055855.3-201ENST00000564269 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
AC055855.3-201ENST00000564269 MAST1Q9Y2H9 1570 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 ARHGAP31Q2M1Z3 1444 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 MDM2Q00987 491 aaPredicted RBP8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 SPRYD7Q5W111 196 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 EID1Q9Y6B2 187 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 SLIT1O75093 1534 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 STRCP1A6NGW2 1772 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 MROH1Q8NDA8 1641 aa8.32□□□□□ -1.08
AC055855.3-201ENST00000564269 FAM135BQ49AJ0 1406 aa8.31□□□□□ -1.08
AC055855.3-201ENST00000564269 MYOM3Q5VTT5 1437 aa8.31□□□□□ -1.08
AC055855.3-201ENST00000564269 CCDC102AQ96A19 550 aa8.31□□□□□ -1.08
AC055855.3-201ENST00000564269 SYNMO15061 1565 aa8.31□□□□□ -1.08
AC055855.3-201ENST00000564269 ZC3H13Q5T200 1668 aaKnown RBP8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 MINK1Q8N4C8 1332 aaPredicted RBP8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 EIF2AK4Q9P2K8 1649 aaKnown RBP8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 CD46P15529 392 aa8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 POTEAQ6S8J7 498 aa8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 FAM160A2Q8N612 972 aaPredicted RBP8.3□□□□□ -1.08
AC055855.3-201ENST00000564269 RRP7BPQ9NSQ0 103 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms