RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 IRF5Q13568 498 aa10.05□□□□□ -0.8
LINC00254-201ENST00000563416 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
LINC00254-201ENST00000563416 GRM5P41594 1212 aa10.04□□□□□ -0.8
LINC00254-201ENST00000563416 DHX9Q08211 1270 aaKnown RBP10.03□□□□□ -0.8
LINC00254-201ENST00000563416 TRAF7Q6Q0C0 670 aa10.03□□□□□ -0.8
LINC00254-201ENST00000563416 HPS1Q92902 700 aa10.03□□□□□ -0.8
LINC00254-201ENST00000563416 POM121Q96HA1 1249 aa10.03□□□□□ -0.8
LINC00254-201ENST00000563416 MYT1Q01538 1121 aa10.02□□□□□ -0.81
LINC00254-201ENST00000563416 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
LINC00254-201ENST00000563416 TRIM52Q96A61 297 aa10.02□□□□□ -0.81
LINC00254-201ENST00000563416 AXIN1O15169 862 aa10.01□□□□□ -0.81
LINC00254-201ENST00000563416 SOX11P35716 441 aa10.01□□□□□ -0.81
LINC00254-201ENST00000563416 SMCPP49901 116 aaPredicted RBP10.01□□□□□ -0.81
LINC00254-201ENST00000563416 VAC14Q08AM6 782 aa10.01□□□□□ -0.81
LINC00254-201ENST00000563416 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
LINC00254-201ENST00000563416 CRIPAKQ8N1N5 446 aa10.01□□□□□ -0.81
LINC00254-201ENST00000563416 RNF20Q5VTR2 975 aa10□□□□□ -0.81
LINC00254-201ENST00000563416 CCDC125Q86Z20 511 aa10□□□□□ -0.81
LINC00254-201ENST00000563416 EMILIN1Q9Y6C2 1016 aa10□□□□□ -0.81
LINC00254-201ENST00000563416 WDR4P57081 412 aaKnown RBP9.99□□□□□ -0.81
LINC00254-201ENST00000563416 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
LINC00254-201ENST00000563416 CAPN5O15484 640 aaPredicted RBP9.98□□□□□ -0.81
LINC00254-201ENST00000563416 NR3C2P08235 984 aa9.98□□□□□ -0.81
LINC00254-201ENST00000563416 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
LINC00254-201ENST00000563416 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
LINC00254-201ENST00000563416 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
LINC00254-201ENST00000563416 A6NJR5 290 aa9.97□□□□□ -0.81
LINC00254-201ENST00000563416 ESPNB1AK53 854 aa9.97□□□□□ -0.81
LINC00254-201ENST00000563416 SEMA3FQ13275 785 aa9.97□□□□□ -0.81
LINC00254-201ENST00000563416 AAASQ9NRG9 546 aa9.97□□□□□ -0.81
LINC00254-201ENST00000563416 ZIC2O95409 532 aaPredicted RBP9.96□□□□□ -0.82
LINC00254-201ENST00000563416 TIMP2P16035 220 aa9.96□□□□□ -0.82
LINC00254-201ENST00000563416 RAB15P59190 212 aa9.96□□□□□ -0.82
LINC00254-201ENST00000563416 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
LINC00254-201ENST00000563416 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
LINC00254-201ENST00000563416 GIGYF1O75420 1035 aaPredicted RBP9.95□□□□□ -0.82
LINC00254-201ENST00000563416 ITPKCQ96DU7 683 aa9.94□□□□□ -0.82
LINC00254-201ENST00000563416 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
LINC00254-201ENST00000563416 CEP126Q9P2H0 1117 aa9.94□□□□□ -0.82
LINC00254-201ENST00000563416 SLFNL1Q499Z3 407 aa9.93□□□□□ -0.82
LINC00254-201ENST00000563416 ERVH48-1M5A8F1 160 aa9.92□□□□□ -0.82
LINC00254-201ENST00000563416 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
LINC00254-201ENST00000563416 FNBP4Q8N3X1 1017 aaPredicted RBP9.91□□□□□ -0.82
LINC00254-201ENST00000563416 LCE2BO14633 110 aa9.9□□□□□ -0.82
LINC00254-201ENST00000563416 UPP2O95045 317 aa9.9□□□□□ -0.82
LINC00254-201ENST00000563416 RNF135Q8IUD6 432 aa9.89□□□□□ -0.83
LINC00254-201ENST00000563416 ESF1Q9H501 851 aaKnown RBP9.89□□□□□ -0.83
LINC00254-201ENST00000563416 ALG2Q9H553 416 aa9.89□□□□□ -0.83
LINC00254-201ENST00000563416 ATP13A2Q9NQ11 1180 aa9.89□□□□□ -0.83
LINC00254-201ENST00000563416 SCARF1Q14162 830 aa9.88□□□□□ -0.83
LINC00254-201ENST00000563416 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
LINC00254-201ENST00000563416 TMPRSS4Q9NRS4 437 aa9.88□□□□□ -0.83
LINC00254-201ENST00000563416 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
LINC00254-201ENST00000563416 POM121CA8CG34 1229 aa9.87□□□□□ -0.83
LINC00254-201ENST00000563416 MRPL14Q6P1L8 145 aaKnown RBP9.87□□□□□ -0.83
LINC00254-201ENST00000563416 MEIOBQ8N635 442 aa9.87□□□□□ -0.83
LINC00254-201ENST00000563416 ZMYND15Q9H091 742 aa9.87□□□□□ -0.83
LINC00254-201ENST00000563416 SENP2Q9HC62 589 aa9.87□□□□□ -0.83
LINC00254-201ENST00000563416 Q6ZVU0 165 aa9.86□□□□□ -0.83
LINC00254-201ENST00000563416 ERICH6Q7L0X2 663 aa9.86□□□□□ -0.83
LINC00254-201ENST00000563416 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
LINC00254-201ENST00000563416 DACH1Q9UI36 760 aa9.86□□□□□ -0.83
LINC00254-201ENST00000563416 TRAK2O60296 914 aa9.85□□□□□ -0.83
LINC00254-201ENST00000563416 BMP1P13497 986 aa9.85□□□□□ -0.83
LINC00254-201ENST00000563416 HDGFL1Q5TGJ6 251 aa9.85□□□□□ -0.83
LINC00254-201ENST00000563416 CC2D2BQ6DHV5 1058 aa9.85□□□□□ -0.83
LINC00254-201ENST00000563416 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
LINC00254-201ENST00000563416 CYLDQ9NQC7 956 aa9.85□□□□□ -0.83
LINC00254-201ENST00000563416 DOLKQ9UPQ8 538 aa9.85□□□□□ -0.83
LINC00254-201ENST00000563416 ERVK-9P63128 1117 aa9.84□□□□□ -0.83
LINC00254-201ENST00000563416 CBLBQ13191 982 aa9.84□□□□□ -0.83
LINC00254-201ENST00000563416 MAP7D1Q3KQU3 841 aa9.84□□□□□ -0.83
LINC00254-201ENST00000563416 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
LINC00254-201ENST00000563416 PHTF2Q8N3S3 785 aa9.84□□□□□ -0.83
LINC00254-201ENST00000563416 SIRT1Q96EB6 747 aa9.84□□□□□ -0.83
LINC00254-201ENST00000563416 LILRA1O75019 489 aa9.83□□□□□ -0.84
LINC00254-201ENST00000563416 MYCP01106 439 aaPredicted RBP9.83□□□□□ -0.84
LINC00254-201ENST00000563416 TRIM46Q7Z4K8 759 aa9.83□□□□□ -0.84
LINC00254-201ENST00000563416 C14orf37Q86TY3 774 aa9.83□□□□□ -0.84
LINC00254-201ENST00000563416 GLMNQ92990 594 aa9.83□□□□□ -0.84
LINC00254-201ENST00000563416 CCDC85AQ96PX6 553 aaPredicted RBP9.83□□□□□ -0.84
LINC00254-201ENST00000563416 ADH1AP07327 375 aa9.82□□□□□ -0.84
LINC00254-201ENST00000563416 BMP2P12643 396 aa9.82□□□□□ -0.84
LINC00254-201ENST00000563416 PLPP7Q8NBV4 271 aa9.82□□□□□ -0.84
LINC00254-201ENST00000563416 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
LINC00254-201ENST00000563416 CALR3Q96L12 384 aaKnown RBP9.82□□□□□ -0.84
LINC00254-201ENST00000563416 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
LINC00254-201ENST00000563416 USP4Q13107 963 aa9.81□□□□□ -0.84
LINC00254-201ENST00000563416 C6orf118Q5T5N4 469 aa9.81□□□□□ -0.84
LINC00254-201ENST00000563416 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
LINC00254-201ENST00000563416 ADAMTS19Q8TE59 1207 aa9.81□□□□□ -0.84
LINC00254-201ENST00000563416 PURBQ96QR8 312 aaKnown RBP9.81□□□□□ -0.84
LINC00254-201ENST00000563416 CHIC2Q9UKJ5 165 aa9.81□□□□□ -0.84
LINC00254-201ENST00000563416 C11orf95C9JLR9 678 aaPredicted RBP9.8□□□□□ -0.84
LINC00254-201ENST00000563416 SKIP12755 728 aa9.8□□□□□ -0.84
LINC00254-201ENST00000563416 CYP2U1Q7Z449 544 aa9.8□□□□□ -0.84
LINC00254-201ENST00000563416 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
LINC00254-201ENST00000563416 ZFP42Q96MM3 310 aa9.8□□□□□ -0.84
LINC00254-201ENST00000563416 ATP5J2-PTCD1G3V325 749 aa9.79□□□□□ -0.84
LINC00254-201ENST00000563416 LZTS3O60299 673 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms