RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 SH3D19Q5HYK7 790 aa10.79□□□□□ -0.68
ZEB1-216ENST00000559496 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
ZEB1-216ENST00000559496 TSC1Q92574 1164 aa10.79□□□□□ -0.68
ZEB1-216ENST00000559496 F12P00748 615 aaPredicted RBP10.78□□□□□ -0.68
ZEB1-216ENST00000559496 EHBP1Q8NDI1 1231 aa10.78□□□□□ -0.68
ZEB1-216ENST00000559496 DACH1Q9UI36 760 aa10.78□□□□□ -0.68
ZEB1-216ENST00000559496 ARHGAP35Q9NRY4 1499 aa10.77□□□□□ -0.68
ZEB1-216ENST00000559496 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
ZEB1-216ENST00000559496 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
ZEB1-216ENST00000559496 PER1O15534 1290 aaPredicted RBP10.77□□□□□ -0.69
ZEB1-216ENST00000559496 ZNF511Q8NB15 262 aa10.77□□□□□ -0.69
ZEB1-216ENST00000559496 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
ZEB1-216ENST00000559496 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
ZEB1-216ENST00000559496 EFCAB5A4FU69 1503 aa10.76□□□□□ -0.69
ZEB1-216ENST00000559496 CEP170Q5SW79 1584 aa10.76□□□□□ -0.69
ZEB1-216ENST00000559496 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
ZEB1-216ENST00000559496 MAP10Q9P2G4 905 aa10.76□□□□□ -0.69
ZEB1-216ENST00000559496 CHD1O14646 1710 aa10.75□□□□□ -0.69
ZEB1-216ENST00000559496 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
ZEB1-216ENST00000559496 NUP160Q12769 1436 aa10.75□□□□□ -0.69
ZEB1-216ENST00000559496 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
ZEB1-216ENST00000559496 PROCA1Q8NCQ7 364 aaPredicted RBP10.75□□□□□ -0.69
ZEB1-216ENST00000559496 HPS1Q92902 700 aa10.75□□□□□ -0.69
ZEB1-216ENST00000559496 ZNF775Q96BV0 537 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-216ENST00000559496 ALDH1A1P00352 501 aa10.73□□□□□ -0.69
ZEB1-216ENST00000559496 VARSP26640 1264 aaKnown RBP10.73□□□□□ -0.69
ZEB1-216ENST00000559496 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.73□□□□□ -0.69
ZEB1-216ENST00000559496 ATP1B4Q9UN42 357 aaPredicted RBP10.73□□□□□ -0.69
ZEB1-216ENST00000559496 NEUROD2Q15784 382 aa10.72□□□□□ -0.69
ZEB1-216ENST00000559496 SAMD9Q5K651 1589 aa10.72□□□□□ -0.69
ZEB1-216ENST00000559496 UGGT2Q9NYU1 1516 aa10.71□□□□□ -0.69
ZEB1-216ENST00000559496 PPP2R2DQ66LE6 453 aa10.71□□□□□ -0.69
ZEB1-216ENST00000559496 GMPR2Q9P2T1 348 aaKnown RBP10.71□□□□□ -0.69
ZEB1-216ENST00000559496 FHOD3Q2V2M9 1422 aa10.7□□□□□ -0.7
ZEB1-216ENST00000559496 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
ZEB1-216ENST00000559496 MPNDQ8N594 471 aa10.7□□□□□ -0.7
ZEB1-216ENST00000559496 ARMC2Q8NEN0 867 aa10.7□□□□□ -0.7
ZEB1-216ENST00000559496 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
ZEB1-216ENST00000559496 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
ZEB1-216ENST00000559496 ATP13A2Q9NQ11 1180 aa10.69□□□□□ -0.7
ZEB1-216ENST00000559496 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
ZEB1-216ENST00000559496 FBXO31Q5XUX0 539 aaPredicted RBP10.67□□□□□ -0.7
ZEB1-216ENST00000559496 TLL2Q9Y6L7 1015 aa10.67□□□□□ -0.7
ZEB1-216ENST00000559496 FAM174AQ8TBP5 190 aa10.66□□□□□ -0.7
ZEB1-216ENST00000559496 FOXJ1Q92949 421 aa10.66□□□□□ -0.7
ZEB1-216ENST00000559496 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
ZEB1-216ENST00000559496 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
ZEB1-216ENST00000559496 FMN1Q68DA7 1419 aa10.65□□□□□ -0.7
ZEB1-216ENST00000559496 DISP1Q96F81 1524 aa10.65□□□□□ -0.7
ZEB1-216ENST00000559496 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.71
ZEB1-216ENST00000559496 AGERQ15109 404 aa10.65□□□□□ -0.71
ZEB1-216ENST00000559496 IL27Q8NEV9 243 aa10.65□□□□□ -0.71
ZEB1-216ENST00000559496 PCF11O94913 1555 aaKnown RBP10.64□□□□□ -0.71
ZEB1-216ENST00000559496 CARMIL2Q6F5E8 1435 aa10.64□□□□□ -0.71
ZEB1-216ENST00000559496 C11orf95C9JLR9 678 aaPredicted RBP10.64□□□□□ -0.71
ZEB1-216ENST00000559496 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
ZEB1-216ENST00000559496 PCMTD1Q96MG8 357 aaPredicted RBP10.64□□□□□ -0.71
ZEB1-216ENST00000559496 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
ZEB1-216ENST00000559496 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
ZEB1-216ENST00000559496 PPARGC1BQ86YN6 1023 aaKnown RBP10.63□□□□□ -0.71
ZEB1-216ENST00000559496 LRRN4Q8WUT4 740 aa10.63□□□□□ -0.71
ZEB1-216ENST00000559496 GPKOWQ92917 476 aaPredicted RBP eCLIP10.63□□□□□ -0.71
ZEB1-216ENST00000559496 FYCO1Q9BQS8 1478 aa10.62□□□□□ -0.71
ZEB1-216ENST00000559496 CASKIN1Q8WXD9 1431 aa10.62□□□□□ -0.71
ZEB1-216ENST00000559496 AP1G2O75843 785 aa10.62□□□□□ -0.71
ZEB1-216ENST00000559496 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
ZEB1-216ENST00000559496 CDK15Q96Q40 435 aa10.62□□□□□ -0.71
ZEB1-216ENST00000559496 SHROOM2Q13796 1616 aa10.62□□□□□ -0.71
ZEB1-216ENST00000559496 SENP2Q9HC62 589 aa10.61□□□□□ -0.71
ZEB1-216ENST00000559496 PRG4Q92954 1404 aaPredicted RBP10.6□□□□□ -0.71
ZEB1-216ENST00000559496 LCE2AQ5TA79 106 aaPredicted RBP10.6□□□□□ -0.71
ZEB1-216ENST00000559496 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
ZEB1-216ENST00000559496 CAPN5O15484 640 aaPredicted RBP10.59□□□□□ -0.71
ZEB1-216ENST00000559496 RFC5P40937 340 aa10.59□□□□□ -0.71
ZEB1-216ENST00000559496 NNTQ13423 1086 aa10.59□□□□□ -0.71
ZEB1-216ENST00000559496 SH3BP5LQ7L8J4 393 aa10.59□□□□□ -0.71
ZEB1-216ENST00000559496 ADH1CP00326 375 aa10.58□□□□□ -0.72
ZEB1-216ENST00000559496 SNRPBP14678 240 aaKnown RBP10.58□□□□□ -0.72
ZEB1-216ENST00000559496 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
ZEB1-216ENST00000559496 KIFC2Q96AC6 838 aa10.58□□□□□ -0.72
ZEB1-216ENST00000559496 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
ZEB1-216ENST00000559496 FKBPLQ9UIM3 349 aa10.58□□□□□ -0.72
ZEB1-216ENST00000559496 MAP3K1Q13233 1512 aa10.57□□□□□ -0.72
ZEB1-216ENST00000559496 NR6A1Q15406 480 aa10.57□□□□□ -0.72
ZEB1-216ENST00000559496 PDXDC2PQ6P474 469 aa10.57□□□□□ -0.72
ZEB1-216ENST00000559496 ERICH6Q7L0X2 663 aa10.57□□□□□ -0.72
ZEB1-216ENST00000559496 TRIM46Q7Z4K8 759 aa10.57□□□□□ -0.72
ZEB1-216ENST00000559496 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
ZEB1-216ENST00000559496 CFAP43Q8NDM7 1665 aa10.57□□□□□ -0.72
ZEB1-216ENST00000559496 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
ZEB1-216ENST00000559496 TMEM259Q4ZIN3 620 aa10.56□□□□□ -0.72
ZEB1-216ENST00000559496 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
ZEB1-216ENST00000559496 KLF16Q9BXK1 252 aaPredicted RBP10.56□□□□□ -0.72
ZEB1-216ENST00000559496 BMP1P13497 986 aa10.55□□□□□ -0.72
ZEB1-216ENST00000559496 TRIM26Q12899 539 aaPredicted RBP10.55□□□□□ -0.72
ZEB1-216ENST00000559496 NR5A1Q13285 461 aa10.55□□□□□ -0.72
ZEB1-216ENST00000559496 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
ZEB1-216ENST00000559496 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
ZEB1-216ENST00000559496 TIMP2P16035 220 aa10.54□□□□□ -0.72
ZEB1-216ENST00000559496 GRM5P41594 1212 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms