RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 MAGEB6P1A0A0J9YX57 407 aa11.08□□□□□ -0.64
AC012409.1-202ENST00000558449 RASA1P20936 1047 aa11.08□□□□□ -0.64
AC012409.1-202ENST00000558449 CRTC2Q53ET0 693 aaPredicted RBP11.08□□□□□ -0.64
AC012409.1-202ENST00000558449 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L12C9JPN9 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L21D6R901 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 S1PR4O95977 384 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
AC012409.1-202ENST00000558449 PTK7Q13308 1070 aa11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 AGERQ15109 404 aa11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 EML3Q32P44 896 aa11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 BPHLQ86WA6 291 aaPredicted RBP11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 FOXJ1Q92949 421 aa11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 FCF1Q9Y324 198 aaKnown RBP11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 IVNS1ABPQ9Y6Y0 642 aa11.06□□□□□ -0.64
AC012409.1-202ENST00000558449 RANGAP1P46060 587 aaPredicted RBP11.05□□□□□ -0.64
AC012409.1-202ENST00000558449 MFAP1P55081 439 aaKnown RBP11.05□□□□□ -0.64
AC012409.1-202ENST00000558449 GIGYF1O75420 1035 aaPredicted RBP11.04□□□□□ -0.64
AC012409.1-202ENST00000558449 ERFEQ4G0M1 354 aa11.04□□□□□ -0.64
AC012409.1-202ENST00000558449 ZNF511Q8NB15 262 aa11.04□□□□□ -0.64
AC012409.1-202ENST00000558449 FAM200AQ8TCP9 573 aa11.04□□□□□ -0.64
AC012409.1-202ENST00000558449 C4orf48Q5BLP8 95 aa11.03□□□□□ -0.64
AC012409.1-202ENST00000558449 B4GALNT3Q6L9W6 998 aa11.03□□□□□ -0.64
AC012409.1-202ENST00000558449 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
AC012409.1-202ENST00000558449 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
AC012409.1-202ENST00000558449 ANKMY2Q8IV38 441 aa11.02□□□□□ -0.65
AC012409.1-202ENST00000558449 OGFOD1Q8N543 542 aa11.02□□□□□ -0.65
AC012409.1-202ENST00000558449 DOLKQ9UPQ8 538 aa11.02□□□□□ -0.65
AC012409.1-202ENST00000558449 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
AC012409.1-202ENST00000558449 TRIM50Q86XT4 487 aa11.01□□□□□ -0.65
AC012409.1-202ENST00000558449 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
AC012409.1-202ENST00000558449 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
AC012409.1-202ENST00000558449 CLDN10P78369 228 aa11□□□□□ -0.65
AC012409.1-202ENST00000558449 RNF20Q5VTR2 975 aa11□□□□□ -0.65
AC012409.1-202ENST00000558449 DNAAF2Q9NVR5 837 aaKnown RBP11□□□□□ -0.65
AC012409.1-202ENST00000558449 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 ATP1A2P50993 1020 aa10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 SH3BP2P78314 561 aa10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 FAM69CQ0P6D2 419 aa10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 DPYDQ12882 1025 aa10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 MTMR7Q9Y216 660 aa10.99□□□□□ -0.65
AC012409.1-202ENST00000558449 ZBTB7BO15156 539 aaPredicted RBP10.98□□□□□ -0.65
AC012409.1-202ENST00000558449 PHLDB3Q6NSJ2 640 aa10.98□□□□□ -0.65
AC012409.1-202ENST00000558449 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
AC012409.1-202ENST00000558449 C1QTNF2Q9BXJ5 285 aa10.98□□□□□ -0.65
AC012409.1-202ENST00000558449 SLAIN2Q9P270 581 aa10.98□□□□□ -0.65
AC012409.1-202ENST00000558449 GNEQ9Y223 722 aaKnown RBP10.98□□□□□ -0.65
AC012409.1-202ENST00000558449 SSFA2P28290 1259 aa10.97□□□□□ -0.65
AC012409.1-202ENST00000558449 LARGE2Q8N3Y3 721 aa10.97□□□□□ -0.65
AC012409.1-202ENST00000558449 CLP1Q92989 425 aaKnown RBP10.97□□□□□ -0.65
AC012409.1-202ENST00000558449 ESPNB1AK53 854 aa10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 ZBTB24O43167 697 aaPredicted RBP10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 GTF2IP78347 998 aa10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 NBPF20Q3BBV1 942 aa10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 TXNDC2Q86VQ3 553 aa10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 TRMT44Q8IYL2 757 aaKnown RBP10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 KIAA1024Q9UPX6 916 aa10.95□□□□□ -0.66
AC012409.1-202ENST00000558449 DKK1O94907 266 aa10.94□□□□□ -0.66
AC012409.1-202ENST00000558449 KCNC4Q03721 635 aa10.94□□□□□ -0.66
AC012409.1-202ENST00000558449 SND1Q7KZF4 910 aaKnown RBP eCLIP10.94□□□□□ -0.66
AC012409.1-202ENST00000558449 CDV3Q9UKY7 258 aaKnown RBP10.94□□□□□ -0.66
AC012409.1-202ENST00000558449 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
AC012409.1-202ENST00000558449 USP4Q13107 963 aa10.93□□□□□ -0.66
AC012409.1-202ENST00000558449 SWI5Q1ZZU3 235 aa10.93□□□□□ -0.66
AC012409.1-202ENST00000558449 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
AC012409.1-202ENST00000558449 SEPT12Q8IYM1 358 aa10.93□□□□□ -0.66
AC012409.1-202ENST00000558449 SIX5Q8N196 739 aa10.93□□□□□ -0.66
AC012409.1-202ENST00000558449 PCDHB11Q9Y5F2 797 aa10.93□□□□□ -0.66
AC012409.1-202ENST00000558449 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
AC012409.1-202ENST00000558449 CCDC102BQ68D86 513 aa10.92□□□□□ -0.66
AC012409.1-202ENST00000558449 CCDC125Q86Z20 511 aa10.92□□□□□ -0.66
AC012409.1-202ENST00000558449 SIRT1Q96EB6 747 aa10.92□□□□□ -0.66
AC012409.1-202ENST00000558449 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
AC012409.1-202ENST00000558449 PCDHGA11Q9Y5H2 935 aa10.92□□□□□ -0.66
AC012409.1-202ENST00000558449 RNF223E7ERA6 249 aa10.91□□□□□ -0.66
AC012409.1-202ENST00000558449 ATP2B4P23634 1241 aa10.91□□□□□ -0.66
AC012409.1-202ENST00000558449 SEC13P55735 322 aa10.9□□□□□ -0.66
AC012409.1-202ENST00000558449 TRIM32Q13049 653 aa10.9□□□□□ -0.66
AC012409.1-202ENST00000558449 FOXD4L5Q5VV16 416 aaPredicted RBP10.9□□□□□ -0.66
AC012409.1-202ENST00000558449 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
AC012409.1-202ENST00000558449 FOXD4L4Q8WXT5 416 aaPredicted RBP10.9□□□□□ -0.66
AC012409.1-202ENST00000558449 KCTD15Q96SI1 283 aaPredicted RBP10.9□□□□□ -0.66
AC012409.1-202ENST00000558449 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
AC012409.1-202ENST00000558449 VARSP26640 1264 aaKnown RBP10.89□□□□□ -0.67
AC012409.1-202ENST00000558449 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms