RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 IRX5P78411 483 aaPredicted RBP10.07□□□□□ -0.8
SAMD4A-211ENST00000557013 WDR63Q8IWG1 891 aa10.07□□□□□ -0.8
SAMD4A-211ENST00000557013 PDCL2Q8N4E4 241 aa10.07□□□□□ -0.8
SAMD4A-211ENST00000557013 SMC4Q9NTJ3 1288 aa10.07□□□□□ -0.8
SAMD4A-211ENST00000557013 TRAK1Q9UPV9 953 aa10.07□□□□□ -0.8
SAMD4A-211ENST00000557013 NLRP1Q9C000 1473 aa10.07□□□□□ -0.8
SAMD4A-211ENST00000557013 ADGRF5Q8IZF2 1346 aa10.06□□□□□ -0.8
SAMD4A-211ENST00000557013 POLR3AO14802 1390 aaPredicted RBP10.06□□□□□ -0.8
SAMD4A-211ENST00000557013 MROH2AA6NES4 1674 aa10.06□□□□□ -0.8
SAMD4A-211ENST00000557013 RNF214Q8ND24 703 aa10.06□□□□□ -0.8
SAMD4A-211ENST00000557013 TSR2Q969E8 191 aaKnown RBP10.06□□□□□ -0.8
SAMD4A-211ENST00000557013 DNAJC2Q99543 621 aaKnown RBP10.06□□□□□ -0.8
SAMD4A-211ENST00000557013 RGS22Q8NE09 1264 aa10.06□□□□□ -0.8
SAMD4A-211ENST00000557013 ABCC3O15438 1527 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 PPP6R1Q9UPN7 881 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 RNF17Q9BXT8 1623 aaKnown RBP10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.81e-7■■■■■ 29.1
SAMD4A-211ENST00000557013 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 KANK1Q14678 1352 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 NSD3Q9BZ95 1437 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 MROH1Q8NDA8 1641 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 TNRQ92752 1358 aa10.05□□□□□ -0.8
SAMD4A-211ENST00000557013 U2SURPO15042 1029 aaKnown RBP10.04□□□□□ -0.8
SAMD4A-211ENST00000557013 CCDC66A2RUB6 948 aa10.04□□□□□ -0.8
SAMD4A-211ENST00000557013 SKOR2Q2VWA4 1001 aaPredicted RBP10.04□□□□□ -0.8
SAMD4A-211ENST00000557013 NCBP3Q53F19 620 aaKnown RBP10.04□□□□□ -0.8
SAMD4A-211ENST00000557013 CAVIN1Q6NZI2 390 aaKnown RBP10.04□□□□□ -0.8
SAMD4A-211ENST00000557013 MYO3AQ8NEV4 1616 aa10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 KIF3AQ9Y496 699 aa10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 ERVK-7P63135 1459 aa10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 NPATQ14207 1427 aa10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 NCKAP5LQ9HCH0 1330 aa10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 KIAA2012Q0VF49 1180 aa10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 TNPO1Q92973 898 aaKnown RBP10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
SAMD4A-211ENST00000557013 PIP4K2BP78356 416 aa10.02□□□□□ -0.8
SAMD4A-211ENST00000557013 DDX19BQ9UMR2 479 aa10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 NOL7Q9UMY1 257 aaKnown RBP10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 ZKSCAN5Q9Y2L8 839 aa10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 CAMSAP1Q5T5Y3 1602 aa10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 TIGD1Q96MW7 591 aa10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 TMX1Q9H3N1 280 aa10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 KDM5AP29375 1690 aaKnown RBP10.02□□□□□ -0.81
SAMD4A-211ENST00000557013 CEP170BQ9Y4F5 1589 aaPredicted RBP10.01□□□□□ -0.81
SAMD4A-211ENST00000557013 TRIM27P14373 513 aa10.01□□□□□ -0.81
SAMD4A-211ENST00000557013 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
SAMD4A-211ENST00000557013 CHAF1AQ13111 956 aaPredicted RBP10.01□□□□□ -0.81
SAMD4A-211ENST00000557013 EID1Q9Y6B2 187 aa10.01□□□□□ -0.81
SAMD4A-211ENST00000557013 SSH1Q8WYL5 1049 aa10.01□□□□□ -0.81
SAMD4A-211ENST00000557013 PPP1R9BQ96SB3 815 aa10.01□□□□□ -0.81
SAMD4A-211ENST00000557013 NOB1Q9ULX3 412 aaKnown RBP10□□□□□ -0.81
SAMD4A-211ENST00000557013 VIRMAQ69YN4 1812 aaKnown RBP10□□□□□ -0.81
SAMD4A-211ENST00000557013 CCDC27Q2M243 656 aa10□□□□□ -0.81
SAMD4A-211ENST00000557013 ZC3H13Q5T200 1668 aaKnown RBP10□□□□□ -0.81
SAMD4A-211ENST00000557013 ATF7IPQ6VMQ6 1270 aa10□□□□□ -0.81
SAMD4A-211ENST00000557013 CCDC39Q9UFE4 941 aa10□□□□□ -0.81
SAMD4A-211ENST00000557013 MYOM1P52179 1685 aa9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 SAFB2Q14151 953 aaKnown RBP eCLIP9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 TMEM57Q8N5G2 664 aa9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 TRPM2O94759 1503 aa9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 HMGN5P82970 282 aaKnown RBP9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 HDAC1Q13547 482 aaPredicted RBP9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 STRCQ7RTU9 1775 aa9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 ZNF500O60304 480 aaPredicted RBP9.99□□□□□ -0.81
SAMD4A-211ENST00000557013 DEPDC5O75140 1603 aa9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 MCTP1Q6DN14 999 aa9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 PTPRTO14522 1441 aa9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 C17orf53Q8N3J3 647 aaPredicted RBP9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 MYRIPQ8NFW9 859 aa9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 CLTCL1P53675 1640 aa9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 A2ML1A8K2U0 1454 aa9.98□□□□□ -0.81
SAMD4A-211ENST00000557013 IPO8O15397 1037 aaKnown RBP9.97□□□□□ -0.81
SAMD4A-211ENST00000557013 ANKRD45Q5TZF3 282 aa9.97□□□□□ -0.81
SAMD4A-211ENST00000557013 UGGT1Q9NYU2 1555 aa9.97□□□□□ -0.81
SAMD4A-211ENST00000557013 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
SAMD4A-211ENST00000557013 CT47B1P0C2W7 299 aaPredicted RBP9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 PTMSP20962 102 aa9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 TXNDC2Q86VQ3 553 aa9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 GPATCH11Q8N954 259 aa9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 ZNF692Q9BU19 519 aaPredicted RBP9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 SPHKAPQ2M3C7 1700 aa9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 TMPOP42166 694 aaKnown RBP9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 FAM193AP78312 1265 aa9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 THEMISQ8N1K5 641 aaPredicted RBP9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.81
SAMD4A-211ENST00000557013 FOXD4L5Q5VV16 416 aaPredicted RBP9.96□□□□□ -0.82
SAMD4A-211ENST00000557013 CHD1LQ86WJ1 897 aa9.96□□□□□ -0.82
SAMD4A-211ENST00000557013 FOXD4L4Q8WXT5 416 aaPredicted RBP9.96□□□□□ -0.82
SAMD4A-211ENST00000557013 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.82
SAMD4A-211ENST00000557013 BCL2L12Q9HB09 334 aa9.96□□□□□ -0.82
SAMD4A-211ENST00000557013 ZNF142P52746 1687 aaPredicted RBP9.96□□□□□ -0.82
SAMD4A-211ENST00000557013 SPATA31D1Q6ZQQ2 1576 aa9.95□□□□□ -0.82
SAMD4A-211ENST00000557013 TNNT1P13805 278 aa9.95□□□□□ -0.82
SAMD4A-211ENST00000557013 IDI1Q13907 227 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms