RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 CRB1P82279 1406 aa13.01□□□□□ -0.33
PRKCH-213ENST00000555185 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
PRKCH-213ENST00000555185 CPDO75976 1380 aa13□□□□□ -0.33
PRKCH-213ENST00000555185 ACEP12821 1306 aa12.99□□□□□ -0.33
PRKCH-213ENST00000555185 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
PRKCH-213ENST00000555185 USP19O94966 1318 aa12.98□□□□□ -0.33
PRKCH-213ENST00000555185 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
PRKCH-213ENST00000555185 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
PRKCH-213ENST00000555185 GCP02774 474 aa12.97□□□□□ -0.33
PRKCH-213ENST00000555185 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
PRKCH-213ENST00000555185 POLR3AO14802 1390 aaPredicted RBP12.96□□□□□ -0.33
PRKCH-213ENST00000555185 CDK19Q9BWU1 502 aa12.96□□□□□ -0.33
PRKCH-213ENST00000555185 RGPD5Q99666 1765 aa12.95□□□□□ -0.34
PRKCH-213ENST00000555185 NLGN2Q8NFZ4 835 aa12.95□□□□□ -0.34
PRKCH-213ENST00000555185 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
PRKCH-213ENST00000555185 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
PRKCH-213ENST00000555185 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
PRKCH-213ENST00000555185 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
PRKCH-213ENST00000555185 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
PRKCH-213ENST00000555185 ACSBG1Q96GR2 724 aa12.93□□□□□ -0.34
PRKCH-213ENST00000555185 AXIN2Q9Y2T1 843 aa12.93□□□□□ -0.34
PRKCH-213ENST00000555185 COL18A1P39060 1754 aa12.93□□□□□ -0.34
PRKCH-213ENST00000555185 YBX3P16989 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRKCH-213ENST00000555185 NLRP13Q86W25 1043 aa12.92□□□□□ -0.34
PRKCH-213ENST00000555185 BCL9O00512 1426 aa12.91□□□□□ -0.34
PRKCH-213ENST00000555185 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
PRKCH-213ENST00000555185 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
PRKCH-213ENST00000555185 NHSQ6T4R5 1651 aa12.91□□□□□ -0.34
PRKCH-213ENST00000555185 BTAF1O14981 1849 aa12.9□□□□□ -0.34
PRKCH-213ENST00000555185 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
PRKCH-213ENST00000555185 ZNF526Q8TF50 670 aaPredicted RBP12.9□□□□□ -0.34
PRKCH-213ENST00000555185 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
PRKCH-213ENST00000555185 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.34
PRKCH-213ENST00000555185 WDR17Q8IZU2 1322 aa12.89□□□□□ -0.35
PRKCH-213ENST00000555185 LRRC4BQ9NT99 713 aa12.89□□□□□ -0.35
PRKCH-213ENST00000555185 SOX12O15370 315 aa12.88□□□□□ -0.35
PRKCH-213ENST00000555185 HSPA6P17066 643 aa12.88□□□□□ -0.35
PRKCH-213ENST00000555185 NLRP6P59044 892 aa12.88□□□□□ -0.35
PRKCH-213ENST00000555185 DCAF11Q8TEB1 546 aa12.88□□□□□ -0.35
PRKCH-213ENST00000555185 SLIT3O75094 1523 aa12.88□□□□□ -0.35
PRKCH-213ENST00000555185 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
PRKCH-213ENST00000555185 EXOC5O00471 708 aa12.87□□□□□ -0.35
PRKCH-213ENST00000555185 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
PRKCH-213ENST00000555185 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
PRKCH-213ENST00000555185 POLD1P28340 1107 aa12.86□□□□□ -0.35
PRKCH-213ENST00000555185 KCNQ4P56696 695 aa12.86□□□□□ -0.35
PRKCH-213ENST00000555185 CDCA7Q9BWT1 371 aaPredicted RBP12.86□□□□□ -0.35
PRKCH-213ENST00000555185 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
PRKCH-213ENST00000555185 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
PRKCH-213ENST00000555185 PIK3C2AO00443 1686 aa12.86□□□□□ -0.35
PRKCH-213ENST00000555185 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
PRKCH-213ENST00000555185 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
PRKCH-213ENST00000555185 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
PRKCH-213ENST00000555185 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
PRKCH-213ENST00000555185 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
PRKCH-213ENST00000555185 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
PRKCH-213ENST00000555185 USP6P35125 1406 aa12.84□□□□□ -0.35
PRKCH-213ENST00000555185 BRD4O60885 1362 aaPredicted RBP12.83□□□□□ -0.36
PRKCH-213ENST00000555185 QSER1Q2KHR3 1735 aa12.83□□□□□ -0.36
PRKCH-213ENST00000555185 CAPN15O75808 1086 aa12.83□□□□□ -0.36
PRKCH-213ENST00000555185 GRIN3BO60391 1043 aa12.82□□□□□ -0.36
PRKCH-213ENST00000555185 TRPM1Q7Z4N2 1603 aa12.81□□□□□ -0.36
PRKCH-213ENST00000555185 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
PRKCH-213ENST00000555185 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
PRKCH-213ENST00000555185 ABCC6O95255 1503 aa12.81□□□□□ -0.36
PRKCH-213ENST00000555185 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
PRKCH-213ENST00000555185 SLC16A10Q8TF71 515 aa12.8□□□□□ -0.36
PRKCH-213ENST00000555185 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
PRKCH-213ENST00000555185 CABP1Q9NZU7 370 aa12.8□□□□□ -0.36
PRKCH-213ENST00000555185 ADCY9O60503 1353 aa12.8□□□□□ -0.36
PRKCH-213ENST00000555185 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
PRKCH-213ENST00000555185 QRICH2Q9H0J4 1663 aa12.78□□□□□ -0.36
PRKCH-213ENST00000555185 MSH5O43196 834 aa12.78□□□□□ -0.36
PRKCH-213ENST00000555185 KIF3CO14782 793 aa12.76□□□□□ -0.37
PRKCH-213ENST00000555185 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
PRKCH-213ENST00000555185 COL13A1Q5TAT6 717 aaPredicted RBP12.76□□□□□ -0.37
PRKCH-213ENST00000555185 NLRP2Q9NX02 1062 aa12.76□□□□□ -0.37
PRKCH-213ENST00000555185 NFAT5O94916 1531 aa12.76□□□□□ -0.37
PRKCH-213ENST00000555185 IL2RBP14784 551 aa12.74□□□□□ -0.37
PRKCH-213ENST00000555185 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
PRKCH-213ENST00000555185 COL23A1Q86Y22 540 aaPredicted RBP12.74□□□□□ -0.37
PRKCH-213ENST00000555185 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
PRKCH-213ENST00000555185 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
PRKCH-213ENST00000555185 TTC21BQ7Z4L5 1316 aa12.73□□□□□ -0.37
PRKCH-213ENST00000555185 KCNH5Q8NCM2 988 aa12.73□□□□□ -0.37
PRKCH-213ENST00000555185 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
PRKCH-213ENST00000555185 LY75O60449 1722 aa12.73□□□□□ -0.37
PRKCH-213ENST00000555185 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
PRKCH-213ENST00000555185 CENPJQ9HC77 1338 aaPredicted RBP12.72□□□□□ -0.37
PRKCH-213ENST00000555185 APLP1P51693 650 aa12.72□□□□□ -0.37
PRKCH-213ENST00000555185 HTRA3P83110 453 aa12.72□□□□□ -0.37
PRKCH-213ENST00000555185 LTN1O94822 1766 aa12.71□□□□□ -0.37
PRKCH-213ENST00000555185 PCNTO95613 3336 aa12.71□□□□□ -0.37
PRKCH-213ENST00000555185 ERBB3P21860 1342 aa12.71□□□□□ -0.37
PRKCH-213ENST00000555185 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.37
PRKCH-213ENST00000555185 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.38
PRKCH-213ENST00000555185 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
PRKCH-213ENST00000555185 NSD2O96028 1365 aa12.69□□□□□ -0.38
PRKCH-213ENST00000555185 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
PRKCH-213ENST00000555185 WDR90Q96KV7 1748 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms