RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 CUX2O14529 1486 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 ABCA10Q8WWZ4 1543 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 USP17L5A8MUK1 530 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 DXOO77932 396 aaKnown RBP7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 MSS51Q4VC12 460 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 DEPDC4Q8N2C3 294 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 FAM160A2Q8N612 972 aaPredicted RBP7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 WNT2BQ93097 391 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 PRDM9Q9NQV7 894 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 CCNYL3P0C7X3 344 aa7.28□□□□□ -1.24
PPP4R3A-204ENST00000554574 ANKRD13DQ6ZTN6 518 aa7.28□□□□□ -1.24
PPP4R3A-204ENST00000554574 STAC3Q96MF2 364 aa7.28□□□□□ -1.24
PPP4R3A-204ENST00000554574 WBP1LQ9NX94 342 aa7.28□□□□□ -1.24
PPP4R3A-204ENST00000554574 TMEM164Q5U3C3 297 aa7.27□□□□□ -1.25
PPP4R3A-204ENST00000554574 FOXD4L5Q5VV16 416 aaPredicted RBP7.27□□□□□ -1.25
PPP4R3A-204ENST00000554574 PLEKHM2Q8IWE5 1019 aa7.27□□□□□ -1.25
PPP4R3A-204ENST00000554574 FOXD4L4Q8WXT5 416 aaPredicted RBP7.27□□□□□ -1.25
PPP4R3A-204ENST00000554574 NUDT12Q9BQG2 462 aa7.27□□□□□ -1.25
PPP4R3A-204ENST00000554574 EVA1BQ9NVM1 165 aa7.27□□□□□ -1.25
PPP4R3A-204ENST00000554574 ELOAQ14241 798 aaKnown RBP7.27□□□□□ -1.25
PPP4R3A-204ENST00000554574 CUL7Q14999 1698 aa7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 MMP16P51512 607 aa7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 COPS2P61201 443 aa7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 KCNH2Q12809 1159 aa7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 SPSB2Q99619 263 aa7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 CEP126Q9P2H0 1117 aa7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 NOVA2Q9UNW9 492 aaKnown RBP7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 GPSM3Q9Y4H4 160 aa7.26□□□□□ -1.25
PPP4R3A-204ENST00000554574 PTK2Q05397 1052 aa7.25□□□□□ -1.25
PPP4R3A-204ENST00000554574 PDXDC2PQ6P474 469 aa7.25□□□□□ -1.25
PPP4R3A-204ENST00000554574 PCDHB9Q9Y5E1 797 aa7.25□□□□□ -1.25
PPP4R3A-204ENST00000554574 TARBP1Q13395 1621 aaKnown RBP7.25□□□□□ -1.25
PPP4R3A-204ENST00000554574 ABCA5Q8WWZ7 1642 aa7.25□□□□□ -1.25
PPP4R3A-204ENST00000554574 RAD54L2Q9Y4B4 1467 aa7.25□□□□□ -1.25
PPP4R3A-204ENST00000554574 CRTC2Q53ET0 693 aaPredicted RBP7.25□□□□□ -1.25
PPP4R3A-204ENST00000554574 MRC2Q9UBG0 1479 aa7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 IGF1RP08069 1367 aa7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 TLL1O43897 1013 aa7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 MMRN1Q13201 1228 aa7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 NCOA4Q13772 614 aa7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 PHTF2Q8N3S3 785 aa7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 ARMC2Q8NEN0 867 aa7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 GPKOWQ92917 476 aaPredicted RBP eCLIP7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 MKRN1Q9UHC7 482 aaKnown RBP7.24□□□□□ -1.25
PPP4R3A-204ENST00000554574 FAM196BA6NMK8 535 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L10C9JJH3 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L21D6R901 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 SLFNL1Q499Z3 407 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 NBPF14Q5TI25 921 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 RNF135Q8IUD6 432 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 CLIP1P30622 1438 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 WDR62O43379 1518 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 SND1Q7KZF4 910 aaKnown RBP eCLIP7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 PLPP7Q8NBV4 271 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 ADAM32Q8TC27 787 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 ZNF428Q96B54 188 aa7.23□□□□□ -1.25
PPP4R3A-204ENST00000554574 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
PPP4R3A-204ENST00000554574 SLAIN2Q9P270 581 aa7.22□□□□□ -1.25
PPP4R3A-204ENST00000554574 GNEQ9Y223 722 aaKnown RBP7.22□□□□□ -1.25
PPP4R3A-204ENST00000554574 PBRM1Q86U86 1689 aa7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 CTTNBP2Q8WZ74 1663 aa7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 RASA1P20936 1047 aa7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 PTK7Q13308 1070 aa7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 PTCRAQ6ISU1 281 aaPredicted RBP7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 SPNS2Q8IVW8 549 aa7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 PCGF6Q9BYE7 350 aa7.21□□□□□ -1.25
PPP4R3A-204ENST00000554574 CARMIL1Q5VZK9 1371 aa7.21□□□□□ -1.26
PPP4R3A-204ENST00000554574 CCDC27Q2M243 656 aa7.21□□□□□ -1.26
PPP4R3A-204ENST00000554574 B4GALNT3Q6L9W6 998 aa7.21□□□□□ -1.26
PPP4R3A-204ENST00000554574 THSD4Q6ZMP0 1018 aa7.21□□□□□ -1.26
PPP4R3A-204ENST00000554574 UNC93B1Q9H1C4 597 aa7.21□□□□□ -1.26
PPP4R3A-204ENST00000554574 CHIC2Q9UKJ5 165 aa7.21□□□□□ -1.26
PPP4R3A-204ENST00000554574 THOC2Q8NI27 1593 aaKnown RBP7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 ADH1BP00325 375 aa7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 MCCD1P59942 119 aaPredicted RBP7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 FAM69CQ0P6D2 419 aa7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 TSGA10IPQ3SY00 556 aa7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 LARP1Q6PKG0 1096 aaKnown RBP7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 SH3BP5LQ7L8J4 393 aa7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 ZNF592Q92610 1267 aa7.2□□□□□ -1.26
PPP4R3A-204ENST00000554574 VPS8Q8N3P4 1428 aa7.19□□□□□ -1.26
PPP4R3A-204ENST00000554574 ZPR1O75312 459 aa7.19□□□□□ -1.26
PPP4R3A-204ENST00000554574 TRAF7Q6Q0C0 670 aa7.19□□□□□ -1.26
PPP4R3A-204ENST00000554574 CCDC24Q8N4L8 307 aa7.19□□□□□ -1.26
PPP4R3A-204ENST00000554574 GAPVD1Q14C86 1478 aa7.19□□□□□ -1.26
PPP4R3A-204ENST00000554574 ATP5J2-PTCD1G3V325 749 aa7.19□□□□□ -1.26
PPP4R3A-204ENST00000554574 ZBTB33Q86T24 672 aa7.19□□□□□ -1.26
PPP4R3A-204ENST00000554574 TXNDC2Q86VQ3 553 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms