RNA–Protein interactions for RNA: ENST00000550585.5

PCBP2-218, Transcript of poly(rC) binding protein 2, human

TSL 5

Gene PCBP2, Length 2,543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP2-218	ENST00000550585	NGEF	Q8N5V2	710 aa		11.32	□□□□□ -0.6
PCBP2-218	ENST00000550585	PRDM10	Q9NQV6	1147 aa		11.32	□□□□□ -0.6
PCBP2-218	ENST00000550585	TERF2IP	Q9NYB0	399 aa		11.32	□□□□□ -0.6
PCBP2-218	ENST00000550585	PPP6R1	Q9UPN7	881 aa		11.32	□□□□□ -0.6
PCBP2-218	ENST00000550585	U2SURP	O15042	1029 aa	Known RBP	11.31	□□□□□ -0.6
PCBP2-218	ENST00000550585	ZSCAN20	P17040	1043 aa	Predicted RBP	11.31	□□□□□ -0.6
PCBP2-218	ENST00000550585	HSCB	Q8IWL3	235 aa		11.31	□□□□□ -0.6
PCBP2-218	ENST00000550585	CHMP4B	Q9H444	224 aa	Known RBP	11.31	□□□□□ -0.6
PCBP2-218	ENST00000550585	SPATA31D1	Q6ZQQ2	1576 aa		11.31	□□□□□ -0.6
PCBP2-218	ENST00000550585	FBLN1	P23142	703 aa		11.31	□□□□□ -0.6
PCBP2-218	ENST00000550585	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.31	□□□□□ -0.6
PCBP2-218	ENST00000550585	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	ARHGEF40	Q8TER5	1519 aa		11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	PPP4R3B	Q5MIZ7	849 aa		11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	ZNF692	Q9BU19	519 aa	Predicted RBP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	NOL7	Q9UMY1	257 aa	Known RBP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	KIF13A	Q9H1H9	1805 aa		11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	LETM1	O95202	739 aa	Predicted RBP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	PDE3A	Q14432	1141 aa		11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	PLPPR3	Q6T4P5	718 aa		11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	CLUAP1	Q96AJ1	413 aa		11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	PHF23	Q9BUL5	403 aa	Predicted RBP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	ESF1	Q9H501	851 aa	Known RBP	11.3	□□□□□ -0.6
PCBP2-218	ENST00000550585	SASS6	Q6UVJ0	657 aa		11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	PANK1	Q8TE04	598 aa		11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	NCOA3	Q9Y6Q9	1424 aa		11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	TULP1	O00294	542 aa	Predicted RBP	11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	MCM5	P33992	734 aa		11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	PMFBP1	Q8TBY8	1022 aa		11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	BCL2L13	Q9BXK5	485 aa		11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	C22orf23	Q9BZE7	217 aa		11.29	□□□□□ -0.6
PCBP2-218	ENST00000550585	WDR63	Q8IWG1	891 aa		11.28	□□□□□ -0.6
PCBP2-218	ENST00000550585	DDIT3	P35638	169 aa		11.28	□□□□□ -0.6
PCBP2-218	ENST00000550585	TAF3	Q5VWG9	929 aa		11.28	□□□□□ -0.6
PCBP2-218	ENST00000550585	TXNDC2	Q86VQ3	553 aa		11.28	□□□□□ -0.6
PCBP2-218	ENST00000550585	TNPO1	Q92973	898 aa	Known RBP	11.28	□□□□□ -0.6
PCBP2-218	ENST00000550585	TNN	Q9UQP3	1299 aa		11.28	□□□□□ -0.6
PCBP2-218	ENST00000550585	COG6	Q9Y2V7	657 aa		11.28	□□□□□ -0.6
PCBP2-218	ENST00000550585	MET	P08581	1390 aa		11.27	□□□□□ -0.6
PCBP2-218	ENST00000550585	RARS	P54136	660 aa	Known RBP	11.27	□□□□□ -0.61
PCBP2-218	ENST00000550585	SETD1A	O15047	1707 aa	Known RBP	11.27	□□□□□ -0.61
PCBP2-218	ENST00000550585	PLEKHF1	Q96S99	279 aa		11.27	□□□□□ -0.61
PCBP2-218	ENST00000550585	ARID3A	Q99856	593 aa		11.27	□□□□□ -0.61
PCBP2-218	ENST00000550585	NCKAP5L	Q9HCH0	1330 aa		11.26	□□□□□ -0.61
PCBP2-218	ENST00000550585	COL3A1	P02461	1466 aa	Predicted RBP	11.26	□□□□□ -0.61
PCBP2-218	ENST00000550585	CCDC27	Q2M243	656 aa		11.26	□□□□□ -0.61
PCBP2-218	ENST00000550585	TSR2	Q969E8	191 aa	Known RBP	11.26	□□□□□ -0.61
PCBP2-218	ENST00000550585	NRXN3	Q9Y4C0	1643 aa		11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	GOLGA6L22	H0YM25	854 aa		11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	XPC	Q01831	940 aa	Predicted RBP	11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	RAB3GAP1	Q15042	981 aa		11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	ANKRD26	Q9UPS8	1709 aa		11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	TMPO	P42166	694 aa	Known RBP	11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	SMC5	Q8IY18	1101 aa		11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	ZRANB1	Q9UGI0	708 aa		11.25	□□□□□ -0.61
PCBP2-218	ENST00000550585	DLC1	Q96QB1	1528 aa		11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	DIAPH1	O60610	1272 aa	Known RBP	11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	TRIM35	Q9UPQ4	493 aa		11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	ZKSCAN5	Q9Y2L8	839 aa		11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	ADGRB2	O60241	1585 aa		11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	WASL	O00401	505 aa	Predicted RBP	11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	RLBP1	P12271	317 aa		11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	SNX21	Q969T3	373 aa		11.24	□□□□□ -0.61
PCBP2-218	ENST00000550585	KIF20B	Q96Q89	1820 aa		11.23	□□□□□ -0.61
PCBP2-218	ENST00000550585	MED14	O60244	1454 aa		11.23	□□□□□ -0.61
PCBP2-218	ENST00000550585	KLHL40	Q2TBA0	621 aa		11.23	□□□□□ -0.61
PCBP2-218	ENST00000550585	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.23	□□□□□ -0.61
PCBP2-218	ENST00000550585	PDLIM2	Q96JY6	352 aa		11.23	□□□□□ -0.61
PCBP2-218	ENST00000550585	TMEM51	Q9NW97	253 aa		11.23	□□□□□ -0.61
PCBP2-218	ENST00000550585	PDZRN3	Q9UPQ7	1066 aa		11.23	□□□□□ -0.61
PCBP2-218	ENST00000550585	TNR	Q92752	1358 aa		11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	ZNF445	P59923	1031 aa		11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	NME9	Q86XW9	330 aa		11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	POLK	Q9UBT6	870 aa		11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	PPIP5K1	Q6PFW1	1433 aa		11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	CEBPA	P49715	358 aa	Predicted RBP	11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	MFAP1	P55081	439 aa	Known RBP	11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	NUDT16	Q96DE0	195 aa	Known RBP	11.22	□□□□□ -0.61
PCBP2-218	ENST00000550585	HAP1	P54257	671 aa	Predicted RBP	11.21	□□□□□ -0.61
PCBP2-218	ENST00000550585	EXOSC9	Q06265	439 aa	Known RBP	11.21	□□□□□ -0.61
PCBP2-218	ENST00000550585	EMILIN1	Q9Y6C2	1016 aa		11.21	□□□□□ -0.61
PCBP2-218	ENST00000550585	MYRIP	Q8NFW9	859 aa		11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	RWDD1	Q9H446	243 aa	Predicted RBP	11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	CCDC39	Q9UFE4	941 aa		11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	PNPLA6	Q8IY17	1366 aa		11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	ATP7B	P35670	1465 aa		11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	HSP90AB1	P08238	724 aa	Known RBP	11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	RBM25	P49756	843 aa	Known RBP	11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	DDX49	Q9Y6V7	483 aa	Known RBP	11.2	□□□□□ -0.62
PCBP2-218	ENST00000550585	HMOX1	P09601	288 aa		11.19	□□□□□ -0.62
PCBP2-218	ENST00000550585	CLEC17A	Q6ZS10	378 aa		11.19	□□□□□ -0.62
PCBP2-218	ENST00000550585	NUTM2F	A1L443	756 aa		11.19	□□□□□ -0.62
PCBP2-218	ENST00000550585	CPSF1	Q10570	1443 aa	Known RBP	11.19	□□□□□ -0.62
PCBP2-218	ENST00000550585	TMEM2	Q9UHN6	1383 aa		11.19	□□□□□ -0.62
PCBP2-218	ENST00000550585	LTK	P29376	864 aa		11.18	□□□□□ -0.62
PCBP2-218	ENST00000550585	PRKAR2B	P31323	418 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms