RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 RBM19Q9Y4C8 960 aaKnown RBP8.68□□□□□ -1.02
CASC18-202ENST00000548557 USP31Q70CQ4 1352 aa8.68□□□□□ -1.02
CASC18-202ENST00000548557 PAK3O75914 559 aaPredicted RBP8.68□□□□□ -1.02
CASC18-202ENST00000548557 COG3Q96JB2 828 aa8.68□□□□□ -1.02
CASC18-202ENST00000548557 GGNBP2Q9H3C7 697 aa8.68□□□□□ -1.02
CASC18-202ENST00000548557 MYBBP1AQ9BQG0 1328 aaKnown RBP8.67□□□□□ -1.02
CASC18-202ENST00000548557 NME9Q86XW9 330 aa8.67□□□□□ -1.02
CASC18-202ENST00000548557 ABTB2Q8N961 1025 aa8.67□□□□□ -1.02
CASC18-202ENST00000548557 SOS2Q07890 1332 aaPredicted RBP8.67□□□□□ -1.02
CASC18-202ENST00000548557 UBAP1LF5GYI3 381 aa8.66□□□□□ -1.02
CASC18-202ENST00000548557 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
CASC18-202ENST00000548557 CNGB1Q14028 1251 aaPredicted RBP8.66□□□□□ -1.02
CASC18-202ENST00000548557 NLRP13Q86W25 1043 aa8.66□□□□□ -1.02
CASC18-202ENST00000548557 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.66□□□□□ -1.02
CASC18-202ENST00000548557 PXDNQ92626 1479 aa8.66□□□□□ -1.02
CASC18-202ENST00000548557 OVOS2A0A0J9YW53 1432 aa8.66□□□□□ -1.02
CASC18-202ENST00000548557 OVOS2Q6IE36 1432 aa8.66□□□□□ -1.02
CASC18-202ENST00000548557 NLRP6P59044 892 aa8.65□□□□□ -1.02
CASC18-202ENST00000548557 KIF20BQ96Q89 1820 aa8.65□□□□□ -1.02
CASC18-202ENST00000548557 XPCQ01831 940 aaPredicted RBP8.65□□□□□ -1.02
CASC18-202ENST00000548557 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.02
CASC18-202ENST00000548557 SPATA31A3Q5VYP0 1347 aa8.65□□□□□ -1.02
CASC18-202ENST00000548557 ARHGEF10O15013 1369 aa8.65□□□□□ -1.03
CASC18-202ENST00000548557 AATKQ6ZMQ8 1374 aa8.65□□□□□ -1.03
CASC18-202ENST00000548557 PPP2R1AP30153 589 aa8.64□□□□□ -1.03
CASC18-202ENST00000548557 ZNF592Q92610 1267 aa8.64□□□□□ -1.03
CASC18-202ENST00000548557 DDX17Q92841 729 aaKnown RBP8.64□□□□□ -1.03
CASC18-202ENST00000548557 TRPM3Q9HCF6 1732 aaPredicted RBP8.64□□□□□ -1.03
CASC18-202ENST00000548557 ANKRD26Q9UPS8 1709 aa8.64□□□□□ -1.03
CASC18-202ENST00000548557 TNS3Q68CZ2 1445 aa8.64□□□□□ -1.03
CASC18-202ENST00000548557 NHSL1Q5SYE7 1610 aa8.64□□□□□ -1.03
CASC18-202ENST00000548557 AHDC1Q5TGY3 1603 aaPredicted RBP8.64□□□□□ -1.03
CASC18-202ENST00000548557 ROBO1Q9Y6N7 1651 aa8.64□□□□□ -1.03
CASC18-202ENST00000548557 TICAM2Q86XR7 235 aa8.64□□□□□ -1.03
CASC18-202ENST00000548557 LRRC59Q96AG4 307 aaKnown RBP8.64□□□□□ -1.03
CASC18-202ENST00000548557 KCNH5Q8NCM2 988 aa8.63□□□□□ -1.03
CASC18-202ENST00000548557 ZFP91Q96JP5 570 aaPredicted RBP8.63□□□□□ -1.03
CASC18-202ENST00000548557 ZRANB1Q9UGI0 708 aa8.63□□□□□ -1.03
CASC18-202ENST00000548557 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
CASC18-202ENST00000548557 USP54Q70EL1 1684 aa8.63□□□□□ -1.03
CASC18-202ENST00000548557 PIP4K2BP78356 416 aa8.63□□□□□ -1.03
CASC18-202ENST00000548557 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
CASC18-202ENST00000548557 USP19O94966 1318 aa8.62□□□□□ -1.03
CASC18-202ENST00000548557 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
CASC18-202ENST00000548557 ALS2Q96Q42 1657 aa8.62□□□□□ -1.03
CASC18-202ENST00000548557 TNNT2P45379 298 aaPredicted RBP8.62□□□□□ -1.03
CASC18-202ENST00000548557 ZNF428Q96B54 188 aa8.62□□□□□ -1.03
CASC18-202ENST00000548557 MTHFSP49914 203 aa8.61□□□□□ -1.03
CASC18-202ENST00000548557 NUTM2GQ5VZR2 741 aa8.61□□□□□ -1.03
CASC18-202ENST00000548557 PNISRQ8TF01 805 aaKnown RBP8.61□□□□□ -1.03
CASC18-202ENST00000548557 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
CASC18-202ENST00000548557 GCP02774 474 aa8.61□□□□□ -1.03
CASC18-202ENST00000548557 POLKQ9UBT6 870 aa8.61□□□□□ -1.03
CASC18-202ENST00000548557 CFAP53Q96M91 514 aa8.6□□□□□ -1.03
CASC18-202ENST00000548557 INSRP06213 1382 aa8.6□□□□□ -1.03
CASC18-202ENST00000548557 SLIT3O75094 1523 aa8.6□□□□□ -1.03
CASC18-202ENST00000548557 NUDCQ9Y266 331 aa8.6□□□□□ -1.03
CASC18-202ENST00000548557 PNPLA6Q8IY17 1366 aa8.6□□□□□ -1.03
CASC18-202ENST00000548557 MED1Q15648 1581 aaPredicted RBP8.6□□□□□ -1.03
CASC18-202ENST00000548557 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
CASC18-202ENST00000548557 RNF123Q5XPI4 1314 aa8.59□□□□□ -1.03
CASC18-202ENST00000548557 ATF5Q9Y2D1 282 aaPredicted RBP8.59□□□□□ -1.03
CASC18-202ENST00000548557 CLSTN1O94985 981 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 MARF1Q9Y4F3 1742 aaKnown RBP8.58□□□□□ -1.04
CASC18-202ENST00000548557 MAP3K19Q56UN5 1328 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 PHLPP1O60346 1717 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 FBLN1P23142 703 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
CASC18-202ENST00000548557 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 NFAT5O94916 1531 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 RTL1A6NKG5 1358 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 COL16A1Q07092 1604 aaPredicted RBP8.58□□□□□ -1.04
CASC18-202ENST00000548557 CDK12Q9NYV4 1490 aaPredicted RBP8.58□□□□□ -1.04
CASC18-202ENST00000548557 FANCIQ9NVI1 1328 aa8.58□□□□□ -1.04
CASC18-202ENST00000548557 PPM1GO15355 546 aaPredicted RBP8.57□□□□□ -1.04
CASC18-202ENST00000548557 SOX12O15370 315 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 AMPHP49418 695 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 TMED8Q6PL24 325 aaPredicted RBP8.57□□□□□ -1.04
CASC18-202ENST00000548557 ARHGEF25Q86VW2 580 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 FLT4P35916 1363 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 RBM10P98175 930 aaKnown RBP8.57□□□□□ -1.04
CASC18-202ENST00000548557 PSMD1Q99460 953 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 C1orf115Q9H7X2 142 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 CPDO75976 1380 aa8.57□□□□□ -1.04
CASC18-202ENST00000548557 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
CASC18-202ENST00000548557 RAD21O60216 631 aa8.56□□□□□ -1.04
CASC18-202ENST00000548557 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
CASC18-202ENST00000548557 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
CASC18-202ENST00000548557 IP6K1Q92551 441 aa8.56□□□□□ -1.04
CASC18-202ENST00000548557 COL22A1Q8NFW1 1626 aaPredicted RBP8.56□□□□□ -1.04
CASC18-202ENST00000548557 JCADQ9P266 1359 aa8.55□□□□□ -1.04
CASC18-202ENST00000548557 HOXC9P31274 260 aa8.55□□□□□ -1.04
CASC18-202ENST00000548557 WDR43Q15061 677 aaKnown RBP eCLIP8.55□□□□□ -1.04
CASC18-202ENST00000548557 PHRF1Q9P1Y6 1649 aaKnown RBP8.55□□□□□ -1.04
CASC18-202ENST00000548557 ABCC6O95255 1503 aa8.55□□□□□ -1.04
CASC18-202ENST00000548557 CWC22Q9HCG8 908 aaKnown RBP8.55□□□□□ -1.04
CASC18-202ENST00000548557 BLMP54132 1417 aaPredicted RBP8.55□□□□□ -1.04
CASC18-202ENST00000548557 CRYBG1Q9Y4K1 1723 aa8.55□□□□□ -1.04
CASC18-202ENST00000548557 COL3A1P02461 1466 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms