RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 CFAP74Q9C0B2 1584 aa11.59□□□□□ -0.55
CCDC59-203ENST00000548126 TRIM32Q13049 653 aa11.59□□□□□ -0.55
CCDC59-203ENST00000548126 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
CCDC59-203ENST00000548126 NCOA1Q15788 1441 aa11.59□□□□□ -0.55
CCDC59-203ENST00000548126 ZNF335Q9H4Z2 1342 aaPredicted RBP11.59□□□□□ -0.55
CCDC59-203ENST00000548126 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
CCDC59-203ENST00000548126 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
CCDC59-203ENST00000548126 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
CCDC59-203ENST00000548126 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
CCDC59-203ENST00000548126 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
CCDC59-203ENST00000548126 MINK1Q8N4C8 1332 aaPredicted RBP11.55□□□□□ -0.56
CCDC59-203ENST00000548126 IRF6O14896 467 aa11.54□□□□□ -0.56
CCDC59-203ENST00000548126 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
CCDC59-203ENST00000548126 GMPR2Q9P2T1 348 aaKnown RBP11.54□□□□□ -0.56
CCDC59-203ENST00000548126 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
CCDC59-203ENST00000548126 TOM1O60784 492 aa11.53□□□□□ -0.56
CCDC59-203ENST00000548126 C3P01024 1663 aa11.52□□□□□ -0.56
CCDC59-203ENST00000548126 MDM2Q00987 491 aaPredicted RBP11.52□□□□□ -0.57
CCDC59-203ENST00000548126 CCDC24Q8N4L8 307 aa11.52□□□□□ -0.57
CCDC59-203ENST00000548126 KRI1Q8N9T8 703 aaKnown RBP11.52□□□□□ -0.57
CCDC59-203ENST00000548126 DACH1Q9UI36 760 aa11.52□□□□□ -0.57
CCDC59-203ENST00000548126 RAPGEF6Q8TEU7 1601 aa11.52□□□□□ -0.57
CCDC59-203ENST00000548126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC59-203ENST00000548126 CAMSAP1Q5T5Y3 1602 aa11.51□□□□□ -0.57
CCDC59-203ENST00000548126 MRGPRX2Q96LB1 330 aa11.51□□□□□ -0.57
CCDC59-203ENST00000548126 ESF1Q9H501 851 aaKnown RBP11.51□□□□□ -0.57
CCDC59-203ENST00000548126 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
CCDC59-203ENST00000548126 WFS1O76024 890 aa11.5□□□□□ -0.57
CCDC59-203ENST00000548126 SMPD1P17405 629 aa11.5□□□□□ -0.57
CCDC59-203ENST00000548126 CLCN1P35523 988 aa11.5□□□□□ -0.57
CCDC59-203ENST00000548126 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
CCDC59-203ENST00000548126 HOXA2O43364 376 aa11.49□□□□□ -0.57
CCDC59-203ENST00000548126 WNT7BP56706 349 aa11.49□□□□□ -0.57
CCDC59-203ENST00000548126 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
CCDC59-203ENST00000548126 NUP153P49790 1475 aaKnown RBP11.48□□□□□ -0.57
CCDC59-203ENST00000548126 NUTM1Q86Y26 1132 aa11.47□□□□□ -0.57
CCDC59-203ENST00000548126 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
CCDC59-203ENST00000548126 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
CCDC59-203ENST00000548126 RGS17Q9UGC6 210 aaPredicted RBP11.46□□□□□ -0.57
CCDC59-203ENST00000548126 PLCH2O75038 1416 aa11.45□□□□□ -0.58
CCDC59-203ENST00000548126 JUNDP17535 347 aa11.45□□□□□ -0.58
CCDC59-203ENST00000548126 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
CCDC59-203ENST00000548126 J3QL48 77 aa11.44□□□□□ -0.58
CCDC59-203ENST00000548126 LCE2AQ5TA79 106 aaPredicted RBP11.44□□□□□ -0.58
CCDC59-203ENST00000548126 EFCAB2Q5VUJ9 269 aa11.44□□□□□ -0.58
CCDC59-203ENST00000548126 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
CCDC59-203ENST00000548126 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
CCDC59-203ENST00000548126 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
CCDC59-203ENST00000548126 AFAP1Q8N556 730 aa11.43□□□□□ -0.58
CCDC59-203ENST00000548126 NPATQ14207 1427 aa11.43□□□□□ -0.58
CCDC59-203ENST00000548126 CNTLNQ9NXG0 1405 aa11.43□□□□□ -0.58
CCDC59-203ENST00000548126 AGLP35573 1532 aa11.42□□□□□ -0.58
CCDC59-203ENST00000548126 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
CCDC59-203ENST00000548126 FAM217BQ9NTX9 383 aaPredicted RBP11.42□□□□□ -0.58
CCDC59-203ENST00000548126 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
CCDC59-203ENST00000548126 ZNF518AQ6AHZ1 1483 aa11.42□□□□□ -0.58
CCDC59-203ENST00000548126 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
CCDC59-203ENST00000548126 TCOF1Q13428 1488 aaKnown RBP11.41□□□□□ -0.58
CCDC59-203ENST00000548126 INSM1Q01101 510 aaPredicted RBP11.41□□□□□ -0.58
CCDC59-203ENST00000548126 SAMD9Q5K651 1589 aa11.41□□□□□ -0.58
CCDC59-203ENST00000548126 PRXQ9BXM0 1461 aa11.4□□□□□ -0.58
CCDC59-203ENST00000548126 HLA-CQ95604 372 aa11.4□□□□□ -0.58
CCDC59-203ENST00000548126 PTPRKQ15262 1439 aa11.4□□□□□ -0.58
CCDC59-203ENST00000548126 HPS1Q92902 700 aa11.39□□□□□ -0.59
CCDC59-203ENST00000548126 NUDT12Q9BQG2 462 aa11.39□□□□□ -0.59
CCDC59-203ENST00000548126 DIP2CQ9Y2E4 1556 aa11.39□□□□□ -0.59
CCDC59-203ENST00000548126 CPS1P31327 1500 aa11.39□□□□□ -0.59
CCDC59-203ENST00000548126 ZMYM3Q14202 1370 aa11.39□□□□□ -0.59
CCDC59-203ENST00000548126 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
CCDC59-203ENST00000548126 KDM5CP41229 1560 aa11.38□□□□□ -0.59
CCDC59-203ENST00000548126 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
CCDC59-203ENST00000548126 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
CCDC59-203ENST00000548126 EHBP1Q8NDI1 1231 aa11.38□□□□□ -0.59
CCDC59-203ENST00000548126 STK17AQ9UEE5 414 aa11.38□□□□□ -0.59
CCDC59-203ENST00000548126 SRCAPQ6ZRS2 3230 aa11.37□□□□□ -0.59
CCDC59-203ENST00000548126 SKOR1P84550 965 aa11.37□□□□□ -0.59
CCDC59-203ENST00000548126 GUCA2AQ02747 115 aa11.37□□□□□ -0.59
CCDC59-203ENST00000548126 POTEAQ6S8J7 498 aa11.37□□□□□ -0.59
CCDC59-203ENST00000548126 SHANK2Q9UPX8 1470 aa11.37□□□□□ -0.59
CCDC59-203ENST00000548126 C6orf229H3BNL8 230 aa11.36□□□□□ -0.59
CCDC59-203ENST00000548126 WIPF1O43516 503 aa11.36□□□□□ -0.59
CCDC59-203ENST00000548126 FDX1P10109 184 aa11.36□□□□□ -0.59
CCDC59-203ENST00000548126 WASF2Q9Y6W5 498 aa11.36□□□□□ -0.59
CCDC59-203ENST00000548126 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
CCDC59-203ENST00000548126 TERTO14746 1132 aaKnown RBP11.35□□□□□ -0.59
CCDC59-203ENST00000548126 MS4A1P11836 297 aa11.35□□□□□ -0.59
CCDC59-203ENST00000548126 SNRPBP14678 240 aaKnown RBP11.35□□□□□ -0.59
CCDC59-203ENST00000548126 MLH3Q9UHC1 1453 aa11.35□□□□□ -0.59
CCDC59-203ENST00000548126 ZNF142P52746 1687 aaPredicted RBP11.35□□□□□ -0.59
CCDC59-203ENST00000548126 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
CCDC59-203ENST00000548126 ALKQ9UM73 1620 aa11.35□□□□□ -0.59
CCDC59-203ENST00000548126 CCNYL3P0C7X3 344 aa11.34□□□□□ -0.59
CCDC59-203ENST00000548126 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
CCDC59-203ENST00000548126 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
CCDC59-203ENST00000548126 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
CCDC59-203ENST00000548126 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
CCDC59-203ENST00000548126 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
CCDC59-203ENST00000548126 PTPRNQ16849 979 aa11.31□□□□□ -0.6
CCDC59-203ENST00000548126 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
CCDC59-203ENST00000548126 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms