RNA–Protein interactions for RNA: ENST00000541012.5

CCAR1-213, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-213ENST00000541012 USP54Q70EL1 1684 aa8.18□□□□□ -1.1
CCAR1-213ENST00000541012 SENP3-EIF4A1A0A087X0R7 540 aa8.18□□□□□ -1.1
CCAR1-213ENST00000541012 IL13P35225 146 aa8.18□□□□□ -1.1
CCAR1-213ENST00000541012 FKBP8Q14318 412 aa8.18□□□□□ -1.1
CCAR1-213ENST00000541012 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
CCAR1-213ENST00000541012 NUTM2GQ5VZR2 741 aa8.17□□□□□ -1.1
CCAR1-213ENST00000541012 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
CCAR1-213ENST00000541012 MAP3K19Q56UN5 1328 aa8.17□□□□□ -1.1
CCAR1-213ENST00000541012 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.17□□□□□ -1.1
CCAR1-213ENST00000541012 RCAN3Q9UKA8 241 aa8.17□□□□□ -1.1
CCAR1-213ENST00000541012 MAP2P11137 1827 aaKnown RBP8.16□□□□□ -1.1
CCAR1-213ENST00000541012 STRCP1A6NGW2 1772 aa8.16□□□□□ -1.1
CCAR1-213ENST00000541012 ZNF521Q96K83 1311 aa8.16□□□□□ -1.1
CCAR1-213ENST00000541012 PRKAR2BP31323 418 aa8.16□□□□□ -1.1
CCAR1-213ENST00000541012 WWC1Q8IX03 1113 aa8.16□□□□□ -1.1
CCAR1-213ENST00000541012 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
CCAR1-213ENST00000541012 FBLN1P23142 703 aa8.15□□□□□ -1.1
CCAR1-213ENST00000541012 TMPOP42166 694 aaKnown RBP8.15□□□□□ -1.1
CCAR1-213ENST00000541012 SLFN5Q08AF3 891 aa8.15□□□□□ -1.1
CCAR1-213ENST00000541012 EIF4A2Q14240 407 aaKnown RBP8.15□□□□□ -1.1
CCAR1-213ENST00000541012 PLEKHF1Q96S99 279 aa8.15□□□□□ -1.1
CCAR1-213ENST00000541012 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
CCAR1-213ENST00000541012 RIPK4P57078 832 aa8.15□□□□□ -1.1
CCAR1-213ENST00000541012 HMOX1P09601 288 aa8.14□□□□□ -1.11
CCAR1-213ENST00000541012 NFE2L2Q16236 605 aa8.14□□□□□ -1.11
CCAR1-213ENST00000541012 CDCA7LQ96GN5 454 aa8.14□□□□□ -1.11
CCAR1-213ENST00000541012 RRP7AQ9Y3A4 280 aaKnown RBP8.14□□□□□ -1.11
CCAR1-213ENST00000541012 IL16Q14005 1332 aa8.14□□□□□ -1.11
CCAR1-213ENST00000541012 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
CCAR1-213ENST00000541012 HOXC9P31274 260 aa8.14□□□□□ -1.11
CCAR1-213ENST00000541012 XPCQ01831 940 aaPredicted RBP8.14□□□□□ -1.11
CCAR1-213ENST00000541012 SLAIN2Q9P270 581 aa8.14□□□□□ -1.11
CCAR1-213ENST00000541012 HSP90AB2PQ58FF8 381 aa8.13□□□□□ -1.11
CCAR1-213ENST00000541012 SULT6B1Q6IMI4 303 aa8.13□□□□□ -1.11
CCAR1-213ENST00000541012 IP6K1Q92551 441 aa8.13□□□□□ -1.11
CCAR1-213ENST00000541012 TNS3Q68CZ2 1445 aa8.13□□□□□ -1.11
CCAR1-213ENST00000541012 USP19O94966 1318 aa8.13□□□□□ -1.11
CCAR1-213ENST00000541012 GCP02774 474 aa8.13□□□□□ -1.11
CCAR1-213ENST00000541012 DUSP27Q5VZP5 1158 aa8.13□□□□□ -1.11
CCAR1-213ENST00000541012 SLIT3O75094 1523 aa8.12□□□□□ -1.11
CCAR1-213ENST00000541012 CT47B1P0C2W7 299 aaPredicted RBP8.12□□□□□ -1.11
CCAR1-213ENST00000541012 TRPM3Q9HCF6 1732 aaPredicted RBP8.12□□□□□ -1.11
CCAR1-213ENST00000541012 HAP1P54257 671 aaPredicted RBP8.12□□□□□ -1.11
CCAR1-213ENST00000541012 RRP1P56182 461 aaKnown RBP8.12□□□□□ -1.11
CCAR1-213ENST00000541012 BRINP3Q76B58 766 aa8.12□□□□□ -1.11
CCAR1-213ENST00000541012 POTEDQ86YR6 584 aa8.12□□□□□ -1.11
CCAR1-213ENST00000541012 GAS2L2Q8NHY3 880 aa8.12□□□□□ -1.11
CCAR1-213ENST00000541012 TRMT2AQ8IZ69 625 aaKnown RBP8.11□□□□□ -1.11
CCAR1-213ENST00000541012 PEAK1Q9H792 1746 aa8.11□□□□□ -1.11
CCAR1-213ENST00000541012 NFAT5O94916 1531 aa8.11□□□□□ -1.11
CCAR1-213ENST00000541012 SPATA31A3Q5VYP0 1347 aa8.11□□□□□ -1.11
CCAR1-213ENST00000541012 RTF1Q92541 710 aaKnown RBP8.11□□□□□ -1.11
CCAR1-213ENST00000541012 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
CCAR1-213ENST00000541012 IGSF1Q8N6C5 1336 aa8.11□□□□□ -1.11
CCAR1-213ENST00000541012 CANXP27824 592 aaKnown RBP8.1□□□□□ -1.11
CCAR1-213ENST00000541012 GNAI1P63096 354 aa8.1□□□□□ -1.11
CCAR1-213ENST00000541012 LTV1Q96GA3 475 aaPredicted RBP8.1□□□□□ -1.11
CCAR1-213ENST00000541012 PLEKHG5O94827 1062 aa8.1□□□□□ -1.11
CCAR1-213ENST00000541012 ARHGEF25Q86VW2 580 aa8.1□□□□□ -1.11
CCAR1-213ENST00000541012 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
CCAR1-213ENST00000541012 XIRP1Q702N8 1843 aaKnown RBP8.1□□□□□ -1.11
CCAR1-213ENST00000541012 PXDNQ92626 1479 aa8.09□□□□□ -1.11
CCAR1-213ENST00000541012 PHRF1Q9P1Y6 1649 aaKnown RBP8.09□□□□□ -1.11
CCAR1-213ENST00000541012 ALS2Q96Q42 1657 aa8.09□□□□□ -1.11
CCAR1-213ENST00000541012 EYA1Q99502 592 aa8.09□□□□□ -1.11
CCAR1-213ENST00000541012 TRIM35Q9UPQ4 493 aa8.09□□□□□ -1.11
CCAR1-213ENST00000541012 MARF1Q9Y4F3 1742 aaKnown RBP8.09□□□□□ -1.11
CCAR1-213ENST00000541012 ABCC6O95255 1503 aa8.09□□□□□ -1.11
CCAR1-213ENST00000541012 KDRP35968 1356 aa8.09□□□□□ -1.11
CCAR1-213ENST00000541012 IRX6P78412 446 aaPredicted RBP8.09□□□□□ -1.11
CCAR1-213ENST00000541012 IFT57Q9NWB7 429 aa8.09□□□□□ -1.11
CCAR1-213ENST00000541012 SOS2Q07890 1332 aaPredicted RBP8.08□□□□□ -1.12
CCAR1-213ENST00000541012 LTN1O94822 1766 aa8.08□□□□□ -1.12
CCAR1-213ENST00000541012 HTATSF1O43719 755 aaKnown RBP8.08□□□□□ -1.12
CCAR1-213ENST00000541012 MEX3CQ5U5Q3 659 aaKnown RBP8.08□□□□□ -1.12
CCAR1-213ENST00000541012 ZNF772Q68DY9 489 aaPredicted RBP8.08□□□□□ -1.12
CCAR1-213ENST00000541012 PHACTR3Q96KR7 559 aa8.08□□□□□ -1.12
CCAR1-213ENST00000541012 LAS1LQ9Y4W2 734 aaKnown RBP8.08□□□□□ -1.12
CCAR1-213ENST00000541012 RGPD1P0DJD0 1748 aa8.08□□□□□ -1.12
CCAR1-213ENST00000541012 MS4A1P11836 297 aa8.08□□□□□ -1.12
CCAR1-213ENST00000541012 RXRBP28702 533 aa8.08□□□□□ -1.12
CCAR1-213ENST00000541012 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
CCAR1-213ENST00000541012 ANKRD24Q8TF21 1146 aa8.08□□□□□ -1.12
CCAR1-213ENST00000541012 CSB-PGBD3P0DP91 1061 aa8.07□□□□□ -1.12
CCAR1-213ENST00000541012 ZC3H6P61129 1189 aaKnown RBP8.07□□□□□ -1.12
CCAR1-213ENST00000541012 DDX17Q92841 729 aaKnown RBP8.07□□□□□ -1.12
CCAR1-213ENST00000541012 ZNF428Q96B54 188 aa8.07□□□□□ -1.12
CCAR1-213ENST00000541012 FANCIQ9NVI1 1328 aa8.07□□□□□ -1.12
CCAR1-213ENST00000541012 JCADQ9P266 1359 aa8.07□□□□□ -1.12
CCAR1-213ENST00000541012 AMOTQ4VCS5 1084 aa8.07□□□□□ -1.12
CCAR1-213ENST00000541012 PLEKHO1Q53GL0 409 aaPredicted RBP8.07□□□□□ -1.12
CCAR1-213ENST00000541012 SPINK5Q9NQ38 1064 aaPredicted RBP8.07□□□□□ -1.12
CCAR1-213ENST00000541012 CPDO75976 1380 aa8.06□□□□□ -1.12
CCAR1-213ENST00000541012 LRRC59Q96AG4 307 aaKnown RBP8.06□□□□□ -1.12
CCAR1-213ENST00000541012 CFAP44Q96MT7 982 aa8.06□□□□□ -1.12
CCAR1-213ENST00000541012 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
CCAR1-213ENST00000541012 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
CCAR1-213ENST00000541012 EXOSC9Q06265 439 aaKnown RBP8.04□□□□□ -1.12
CCAR1-213ENST00000541012 MTHFSDQ2M296 383 aaKnown RBP8.04□□□□□ -1.12
CCAR1-213ENST00000541012 C1orf141Q5JVX7 400 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms