RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 PLA2G2EQ9NZK7 142 aa6.63□□□□□ -1.35
AC090023.2-201ENST00000540875 ZNF608Q9ULD9 1512 aaPredicted RBP6.63□□□□□ -1.35
AC090023.2-201ENST00000540875 LMTK3Q96Q04 1460 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 CLGNO14967 610 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 S1PR4O95977 384 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 CDK11BP21127 795 aaKnown RBP6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 RGS3P49796 1198 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 MMP16P51512 607 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 TMEM259Q4ZIN3 620 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 DESI1Q6ICB0 168 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 PRDM9Q9NQV7 894 aa6.62□□□□□ -1.35
AC090023.2-201ENST00000540875 URB2Q14146 1524 aaKnown RBP6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 ZBED9Q6R2W3 1325 aa6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 AP1G2O75843 785 aa6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 DXOO77932 396 aaKnown RBP6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 JUNDP17535 347 aa6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 PPP1R18Q6NYC8 613 aa6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 FBXO41Q8TF61 875 aa6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 TSC1Q92574 1164 aa6.61□□□□□ -1.35
AC090023.2-201ENST00000540875 SMG6Q86US8 1419 aaKnown RBP6.6□□□□□ -1.35
AC090023.2-201ENST00000540875 PPEF1O14829 653 aaPredicted RBP6.6□□□□□ -1.35
AC090023.2-201ENST00000540875 PER1O15534 1290 aaPredicted RBP6.6□□□□□ -1.35
AC090023.2-201ENST00000540875 PTMAP06454 111 aaKnown RBP6.6□□□□□ -1.35
AC090023.2-201ENST00000540875 MMP14P50281 582 aa6.6□□□□□ -1.35
AC090023.2-201ENST00000540875 LYPD8Q6UX82 237 aa6.6□□□□□ -1.35
AC090023.2-201ENST00000540875 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.6□□□□□ -1.35
AC090023.2-201ENST00000540875 PHLDB1Q86UU1 1377 aa6.59□□□□□ -1.35
AC090023.2-201ENST00000540875 SOCS7O14512 581 aa6.59□□□□□ -1.35
AC090023.2-201ENST00000540875 C14orf37Q86TY3 774 aa6.59□□□□□ -1.35
AC090023.2-201ENST00000540875 BANK1Q8NDB2 785 aa6.59□□□□□ -1.35
AC090023.2-201ENST00000540875 DCAF11Q8TEB1 546 aa6.59□□□□□ -1.35
AC090023.2-201ENST00000540875 ZNF622Q969S3 477 aaKnown RBP eCLIP6.59□□□□□ -1.35
AC090023.2-201ENST00000540875 GOLGA3Q08378 1498 aa6.59□□□□□ -1.36
AC090023.2-201ENST00000540875 CHD1O14646 1710 aa6.59□□□□□ -1.36
AC090023.2-201ENST00000540875 CCDC144AA2RUR9 1427 aa6.59□□□□□ -1.36
AC090023.2-201ENST00000540875 RNF223E7ERA6 249 aa6.58□□□□□ -1.36
AC090023.2-201ENST00000540875 IRX3P78415 501 aaPredicted RBP6.58□□□□□ -1.36
AC090023.2-201ENST00000540875 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
AC090023.2-201ENST00000540875 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
AC090023.2-201ENST00000540875 YY1AP1Q9H869 796 aa6.58□□□□□ -1.36
AC090023.2-201ENST00000540875 SNRKQ9NRH2 765 aa6.58□□□□□ -1.36
AC090023.2-201ENST00000540875 TMEM51Q9NW97 253 aa6.58□□□□□ -1.36
AC090023.2-201ENST00000540875 USP17L8P0C7I0 530 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 PTPRNQ16849 979 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 LRRN4Q8WUT4 740 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 TRIM52Q96A61 297 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 BACH2Q9BYV9 841 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 EVA1BQ9NVM1 165 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 VPS8Q8N3P4 1428 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 ERCC6L2Q5T890 1561 aa6.57□□□□□ -1.36
AC090023.2-201ENST00000540875 IFT140Q96RY7 1462 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 GGCXP38435 758 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 PTCRAQ6ISU1 281 aaPredicted RBP6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 B4GALNT3Q6L9W6 998 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 DHX37Q8IY37 1157 aaKnown RBP6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 ANKLE1Q8NAG6 615 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 RGS22Q8NE09 1264 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 NUDT12Q9BQG2 462 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 TSPYL1Q9H0U9 437 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 FCF1Q9Y324 198 aaKnown RBP6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 SCAPERQ9BY12 1400 aa6.56□□□□□ -1.36
AC090023.2-201ENST00000540875 A0A0G2JS52 829 aa6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 FSD2A1L4K1 749 aa6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 ESPNB1AK53 854 aa6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 HNRNPUQ00839 825 aaKnown RBP eCLIP6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 PLA2G2CQ5R387 149 aa6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 ILDR2Q71H61 639 aa6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 CCDC24Q8N4L8 307 aa6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 CEP120Q8N960 986 aa6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 SECISBP2LQ93073 1101 aaKnown RBP6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 RRBP1Q9P2E9 1410 aaKnown RBP6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 EIF4G3O43432 1585 aaKnown RBP6.55□□□□□ -1.36
AC090023.2-201ENST00000540875 KIF21BO75037 1637 aa6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 DYNC1I1O14576 645 aa6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 F12P00748 615 aaPredicted RBP6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 CCNYL3P0C7X3 344 aa6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 MCCP23508 829 aa6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 MRE11P49959 708 aa6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 KCNH2Q12809 1159 aa6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 EPS8L1Q8TE68 723 aa6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 DNAJC2Q99543 621 aaKnown RBP6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 HMX1Q9NP08 348 aaPredicted RBP6.54□□□□□ -1.36
AC090023.2-201ENST00000540875 HECW2Q9P2P5 1572 aa6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 CLSTN1O94985 981 aa6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 CTHP32929 405 aa6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 NR6A1Q15406 480 aa6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 MTMR14Q8NCE2 650 aa6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 EMID1Q96A84 441 aaPredicted RBP6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 MAP10Q9P2G4 905 aa6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 MAPKBP1O60336 1514 aa6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 VIRMAQ69YN4 1812 aaKnown RBP6.53□□□□□ -1.36
AC090023.2-201ENST00000540875 OFD1O75665 1012 aa6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 FLIIQ13045 1269 aa6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 MCM6Q14566 821 aa6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 LIAT1Q6ZQX7 453 aa6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 GJD4Q96KN9 370 aaPredicted RBP6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 CCDC94Q9BW85 323 aaPredicted RBP6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 TRIM34Q9BYJ4 488 aa6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 NINLQ9Y2I6 1382 aa6.52□□□□□ -1.37
AC090023.2-201ENST00000540875 NCOA2Q15596 1464 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms