RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 RRP1P56182 461 aaKnown RBP26.53■■□□□ 1.84
CDH5-202ENST00000539168 KRT28Q7Z3Y7 464 aa26.53■■□□□ 1.84
CDH5-202ENST00000539168 TRPM3Q9HCF6 1732 aaPredicted RBP26.52■■□□□ 1.84
CDH5-202ENST00000539168 ARHGEF10O15013 1369 aa26.52■■□□□ 1.84
CDH5-202ENST00000539168 PELP1Q8IZL8 1130 aaKnown RBP26.51■■□□□ 1.83
CDH5-202ENST00000539168 XIRP1Q702N8 1843 aaKnown RBP26.51■■□□□ 1.83
CDH5-202ENST00000539168 SOX12O15370 315 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 RIPK4P57078 832 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 HSP90AB2PQ58FF8 381 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 NPHP3Q7Z494 1330 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 RGPD1P0DJD0 1748 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 HMOX1P09601 288 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 LMOD3Q0VAK6 560 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 NFE2L2Q16236 605 aa26.5■■□□□ 1.83
CDH5-202ENST00000539168 CALD1Q05682 793 aaKnown RBP26.49■■□□□ 1.83
CDH5-202ENST00000539168 NUTM2GQ5VZR2 741 aa26.48■■□□□ 1.83
CDH5-202ENST00000539168 SLIT3O75094 1523 aa26.48■■□□□ 1.83
CDH5-202ENST00000539168 NFAT5O94916 1531 aa26.47■■□□□ 1.83
CDH5-202ENST00000539168 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.47■■□□□ 1.83
CDH5-202ENST00000539168 SPINK5Q9NQ38 1064 aaPredicted RBP26.47■■□□□ 1.83
CDH5-202ENST00000539168 PPP4R2Q9NY27 417 aa26.47■■□□□ 1.83
CDH5-202ENST00000539168 ZNF335Q9H4Z2 1342 aaPredicted RBP26.47■■□□□ 1.83
CDH5-202ENST00000539168 PHRF1Q9P1Y6 1649 aaKnown RBP26.47■■□□□ 1.83
CDH5-202ENST00000539168 HOXC9P31274 260 aa26.47■■□□□ 1.83
CDH5-202ENST00000539168 TRIM35Q9UPQ4 493 aa26.47■■□□□ 1.83
CDH5-202ENST00000539168 IRX6P78412 446 aaPredicted RBP26.46■■□□□ 1.83
CDH5-202ENST00000539168 USP19O94966 1318 aa26.45■■□□□ 1.82
CDH5-202ENST00000539168 SULT6B1Q6IMI4 303 aa26.44■■□□□ 1.82
CDH5-202ENST00000539168 CT47B1P0C2W7 299 aaPredicted RBP26.44■■□□□ 1.82
CDH5-202ENST00000539168 IP6K1Q92551 441 aa26.44■■□□□ 1.82
CDH5-202ENST00000539168 ALS2Q96Q42 1657 aa26.43■■□□□ 1.82
CDH5-202ENST00000539168 LTN1O94822 1766 aa26.43■■□□□ 1.82
CDH5-202ENST00000539168 IGSF1Q8N6C5 1336 aa26.42■■□□□ 1.82
CDH5-202ENST00000539168 KDRP35968 1356 aa26.42■■□□□ 1.82
CDH5-202ENST00000539168 PHACTR3Q96KR7 559 aa26.41■■□□□ 1.82
CDH5-202ENST00000539168 GCP02774 474 aa26.4■■□□□ 1.82
CDH5-202ENST00000539168 XPCQ01831 940 aaPredicted RBP26.39■■□□□ 1.82
CDH5-202ENST00000539168 LMOD2Q6P5Q4 547 aa26.38■■□□□ 1.81
CDH5-202ENST00000539168 TNS3Q68CZ2 1445 aa26.37■■□□□ 1.81
CDH5-202ENST00000539168 ARHGEF25Q86VW2 580 aa26.36■■□□□ 1.81
CDH5-202ENST00000539168 EYA1Q99502 592 aa26.36■■□□□ 1.81
CDH5-202ENST00000539168 SLAIN2Q9P270 581 aa26.36■■□□□ 1.81
CDH5-202ENST00000539168 AEBP1Q8IUX7 1158 aa26.35■■□□□ 1.81
CDH5-202ENST00000539168 PXDNQ92626 1479 aa26.35■■□□□ 1.81
CDH5-202ENST00000539168 BRINP3Q76B58 766 aa26.34■■□□□ 1.81
CDH5-202ENST00000539168 FANCIQ9NVI1 1328 aa26.33■■□□□ 1.81
CDH5-202ENST00000539168 GNAI1P63096 354 aa26.32■■□□□ 1.8
CDH5-202ENST00000539168 GAS2L2Q8NHY3 880 aa26.32■■□□□ 1.8
CDH5-202ENST00000539168 SPATA31A3Q5VYP0 1347 aa26.32■■□□□ 1.8
CDH5-202ENST00000539168 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CDH5-202ENST00000539168 IFT57Q9NWB7 429 aa26.31■■□□□ 1.8
CDH5-202ENST00000539168 DLG5Q8TDM6 1919 aa26.31■■□□□ 1.8
CDH5-202ENST00000539168 MED1Q15648 1581 aaPredicted RBP26.29■■□□□ 1.8
CDH5-202ENST00000539168 ABCC6O95255 1503 aa26.29■■□□□ 1.8
CDH5-202ENST00000539168 ZNF428Q96B54 188 aa26.28■■□□□ 1.8
CDH5-202ENST00000539168 HTATSF1O43719 755 aaKnown RBP26.27■■□□□ 1.8
CDH5-202ENST00000539168 SOS2Q07890 1332 aaPredicted RBP26.27■■□□□ 1.8
CDH5-202ENST00000539168 RARSP54136 660 aaKnown RBP26.26■■□□□ 1.79
CDH5-202ENST00000539168 CFAP44Q96MT7 982 aa26.25■■□□□ 1.79
CDH5-202ENST00000539168 ZNF853P0CG23 659 aa26.25■■□□□ 1.79
CDH5-202ENST00000539168 LTV1Q96GA3 475 aaPredicted RBP26.25■■□□□ 1.79
CDH5-202ENST00000539168 TSR2Q969E8 191 aaKnown RBP26.24■■□□□ 1.79
CDH5-202ENST00000539168 PLIN1O60240 522 aa26.23■■□□□ 1.79
CDH5-202ENST00000539168 EXOSC9Q06265 439 aaKnown RBP26.23■■□□□ 1.79
CDH5-202ENST00000539168 PDE3AQ14432 1141 aa26.23■■□□□ 1.79
CDH5-202ENST00000539168 RTF1Q92541 710 aaKnown RBP26.23■■□□□ 1.79
CDH5-202ENST00000539168 DDX17Q92841 729 aaKnown RBP26.23■■□□□ 1.79
CDH5-202ENST00000539168 ZBTB7CA1YPR0 619 aa26.22■■□□□ 1.79
CDH5-202ENST00000539168 BCAR3O75815 825 aa26.21■■□□□ 1.79
CDH5-202ENST00000539168 MTHFSDQ2M296 383 aaKnown RBP26.21■■□□□ 1.79
CDH5-202ENST00000539168 CCDC136Q96JN2 1154 aa26.21■■□□□ 1.79
CDH5-202ENST00000539168 CPDO75976 1380 aa26.21■■□□□ 1.79
CDH5-202ENST00000539168 NCAPD2Q15021 1401 aa26.21■■□□□ 1.79
CDH5-202ENST00000539168 CANXP27824 592 aaKnown RBP26.2■■□□□ 1.78
CDH5-202ENST00000539168 HAP1P54257 671 aaPredicted RBP26.2■■□□□ 1.78
CDH5-202ENST00000539168 CRYBG1Q9Y4K1 1723 aa26.2■■□□□ 1.78
CDH5-202ENST00000539168 NHSL1Q5SYE7 1610 aa26.2■■□□□ 1.78
CDH5-202ENST00000539168 EXOC6Q8TAG9 804 aa26.19■■□□□ 1.78
CDH5-202ENST00000539168 ANKRD24Q8TF21 1146 aa26.19■■□□□ 1.78
CDH5-202ENST00000539168 MS4A1P11836 297 aa26.19■■□□□ 1.78
CDH5-202ENST00000539168 LAS1LQ9Y4W2 734 aaKnown RBP26.19■■□□□ 1.78
CDH5-202ENST00000539168 CAMTA1Q9Y6Y1 1673 aa26.18■■□□□ 1.78
CDH5-202ENST00000539168 ALDH1L2Q3SY69 923 aa26.18■■□□□ 1.78
CDH5-202ENST00000539168 NBPF6Q5VWK0 638 aa26.18■■□□□ 1.78
CDH5-202ENST00000539168 NBPF4Q96M43 638 aa26.18■■□□□ 1.78
CDH5-202ENST00000539168 ZC3H6P61129 1189 aaKnown RBP26.16■■□□□ 1.78
CDH5-202ENST00000539168 CRBNQ96SW2 442 aa26.16■■□□□ 1.78
CDH5-202ENST00000539168 THUMPD2Q9BTF0 503 aaKnown RBP26.16■■□□□ 1.78
CDH5-202ENST00000539168 PLEKHG2Q9H7P9 1386 aa26.16■■□□□ 1.78
CDH5-202ENST00000539168 GNAT3A8MTJ3 354 aa26.15■■□□□ 1.78
CDH5-202ENST00000539168 B4GALNT3Q6L9W6 998 aa26.15■■□□□ 1.78
CDH5-202ENST00000539168 LTBP4Q8N2S1 1624 aa26.15■■□□□ 1.78
CDH5-202ENST00000539168 FAM83GA6ND36 823 aa26.15■■□□□ 1.78
CDH5-202ENST00000539168 AMOTQ4VCS5 1084 aa26.15■■□□□ 1.78
CDH5-202ENST00000539168 MBIPQ9NS73 344 aa26.15■■□□□ 1.78
CDH5-202ENST00000539168 FAM208AQ9UK61 1670 aaKnown RBP26.14■■□□□ 1.78
CDH5-202ENST00000539168 ERBB3P21860 1342 aa26.14■■□□□ 1.78
CDH5-202ENST00000539168 AAMPQ13685 434 aa26.14■■□□□ 1.78
CDH5-202ENST00000539168 MAP3K5Q99683 1374 aa26.14■■□□□ 1.77
CDH5-202ENST00000539168 CHL1O00533 1208 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms