RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PHF8Q9UPP1 1060 aa10.17□□□□□ -0.78
CPSF7-216ENST00000536548 KIF1BO60333 1816 aa10.17□□□□□ -0.78
CPSF7-216ENST00000536548 SBNO1A3KN83 1393 aa10.16□□□□□ -0.78
CPSF7-216ENST00000536548 ARHGEF10O15013 1369 aa10.16□□□□□ -0.78
CPSF7-216ENST00000536548 CARD11Q9BXL7 1154 aa10.16□□□□□ -0.78
CPSF7-216ENST00000536548 DAXXQ9UER7 740 aaPredicted RBP10.16□□□□□ -0.78
CPSF7-216ENST00000536548 VGFO15240 615 aaPredicted RBP10.15□□□□□ -0.78
CPSF7-216ENST00000536548 GPR162Q16538 588 aa10.15□□□□□ -0.78
CPSF7-216ENST00000536548 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
CPSF7-216ENST00000536548 TECPR2O15040 1411 aa10.15□□□□□ -0.79
CPSF7-216ENST00000536548 DLC1Q96QB1 1528 aa10.14□□□□□ -0.79
CPSF7-216ENST00000536548 PTF1AQ7RTS3 328 aa10.14□□□□□ -0.79
CPSF7-216ENST00000536548 PMFBP1Q8TBY8 1022 aa10.14□□□□□ -0.79
CPSF7-216ENST00000536548 LAS1LQ9Y4W2 734 aaKnown RBP10.14□□□□□ -0.79
CPSF7-216ENST00000536548 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
CPSF7-216ENST00000536548 NRXN1Q9ULB1 1477 aa10.13□□□□□ -0.79
CPSF7-216ENST00000536548 HSPA6P17066 643 aa10.13□□□□□ -0.79
CPSF7-216ENST00000536548 GSE1Q14687 1217 aa10.13□□□□□ -0.79
CPSF7-216ENST00000536548 CHRNA2Q15822 529 aa10.13□□□□□ -0.79
CPSF7-216ENST00000536548 PROM2Q8N271 834 aa10.13□□□□□ -0.79
CPSF7-216ENST00000536548 SGIP1Q9BQI5 828 aa10.13□□□□□ -0.79
CPSF7-216ENST00000536548 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-216ENST00000536548 PRDM11Q9NQV5 511 aa10.12□□□□□ -0.79
CPSF7-216ENST00000536548 TRPM3Q9HCF6 1732 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-216ENST00000536548 CRYBG1Q9Y4K1 1723 aa10.12□□□□□ -0.79
CPSF7-216ENST00000536548 ALS2Q96Q42 1657 aa10.12□□□□□ -0.79
CPSF7-216ENST00000536548 TMEM132EQ6IEE7 984 aa10.11□□□□□ -0.79
CPSF7-216ENST00000536548 IL27Q8NEV9 243 aa10.11□□□□□ -0.79
CPSF7-216ENST00000536548 SBF2Q86WG5 1849 aa10.11□□□□□ -0.79
CPSF7-216ENST00000536548 PPLO60437 1756 aa10.11□□□□□ -0.79
CPSF7-216ENST00000536548 PLSCR1O15162 318 aa10.1□□□□□ -0.79
CPSF7-216ENST00000536548 CNGB1Q14028 1251 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-216ENST00000536548 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-216ENST00000536548 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-216ENST00000536548 ARXQ96QS3 562 aa10.1□□□□□ -0.79
CPSF7-216ENST00000536548 RGPD3A6NKT7 1758 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-216ENST00000536548 RGPD4Q7Z3J3 1758 aa10.1□□□□□ -0.79
CPSF7-216ENST00000536548 COL13A1Q5TAT6 717 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-216ENST00000536548 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
CPSF7-216ENST00000536548 MTFR1LQ9H019 292 aa10.09□□□□□ -0.79
CPSF7-216ENST00000536548 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-216ENST00000536548 KIAA0232Q92628 1395 aa10.09□□□□□ -0.79
CPSF7-216ENST00000536548 ST20-MTHFSA0A0A6YYL1 179 aa10.08□□□□□ -0.8
CPSF7-216ENST00000536548 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
CPSF7-216ENST00000536548 EIF3AQ14152 1382 aaKnown RBP10.08□□□□□ -0.8
CPSF7-216ENST00000536548 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 ZC3H6P61129 1189 aaKnown RBP10.07□□□□□ -0.8
CPSF7-216ENST00000536548 NFKBIBQ15653 356 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 SLC15A2Q16348 729 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 KLHL34Q8N239 644 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 KNDC1Q76NI1 1749 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 ADGRF5Q8IZF2 1346 aa10.07□□□□□ -0.8
CPSF7-216ENST00000536548 ABCC11Q96J66 1382 aa10.06□□□□□ -0.8
CPSF7-216ENST00000536548 EVA1CP58658 441 aa10.06□□□□□ -0.8
CPSF7-216ENST00000536548 SAFB2Q14151 953 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPSF7-216ENST00000536548 ZNF526Q8TF50 670 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-216ENST00000536548 STK32BQ9NY57 414 aa10.06□□□□□ -0.8
CPSF7-216ENST00000536548 ATP10DQ9P241 1426 aa10.06□□□□□ -0.8
CPSF7-216ENST00000536548 GPRASP1Q5JY77 1395 aa10.05□□□□□ -0.8
CPSF7-216ENST00000536548 MAP3K5Q99683 1374 aa10.05□□□□□ -0.8
CPSF7-216ENST00000536548 TCP11L2Q8N4U5 519 aa10.05□□□□□ -0.8
CPSF7-216ENST00000536548 SSH2Q76I76 1423 aa10.05□□□□□ -0.8
CPSF7-216ENST00000536548 RPGRIP1LQ68CZ1 1315 aa10.05□□□□□ -0.8
CPSF7-216ENST00000536548 KDM2BQ8NHM5 1336 aa10.05□□□□□ -0.8
CPSF7-216ENST00000536548 PARP4Q9UKK3 1724 aaKnown RBP10.04□□□□□ -0.8
CPSF7-216ENST00000536548 SLC34A2O95436 690 aa10.04□□□□□ -0.8
CPSF7-216ENST00000536548 TXNRD1Q16881 649 aa10.04□□□□□ -0.8
CPSF7-216ENST00000536548 DNAJC5GQ8N7S2 189 aa10.04□□□□□ -0.8
CPSF7-216ENST00000536548 NLGN2Q8NFZ4 835 aa10.04□□□□□ -0.8
CPSF7-216ENST00000536548 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
CPSF7-216ENST00000536548 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-216ENST00000536548 RTN4Q9NQC3 1192 aaKnown RBP10.04□□□□□ -0.8
CPSF7-216ENST00000536548 TRPM1Q7Z4N2 1603 aa10.04□□□□□ -0.8
CPSF7-216ENST00000536548 PHRF1Q9P1Y6 1649 aaKnown RBP10.04□□□□□ -0.8
CPSF7-216ENST00000536548 OVOS2A0A0G2JMS6 1433 aa10.03□□□□□ -0.8
CPSF7-216ENST00000536548 OVOS2A0A0J9YW53 1432 aa10.03□□□□□ -0.8
CPSF7-216ENST00000536548 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.83e-7■■□□□ 12.8
CPSF7-216ENST00000536548 PRELPP51888 382 aa10.03□□□□□ -0.8
CPSF7-216ENST00000536548 OVOS2Q6IE36 1432 aa10.03□□□□□ -0.8
CPSF7-216ENST00000536548 FAM43AQ8N2R8 423 aa10.03□□□□□ -0.8
CPSF7-216ENST00000536548 RSPH6AQ9H0K4 717 aa10.03□□□□□ -0.8
CPSF7-216ENST00000536548 YTHDC2Q9H6S0 1430 aaKnown RBP10.02□□□□□ -0.81
CPSF7-216ENST00000536548 NUTM2GQ5VZR2 741 aa10.02□□□□□ -0.81
CPSF7-216ENST00000536548 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
CPSF7-216ENST00000536548 PER1O15534 1290 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-216ENST00000536548 TMF1P82094 1093 aa10.01□□□□□ -0.81
CPSF7-216ENST00000536548 FRAT1Q92837 279 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-216ENST00000536548 CDCA7LQ96GN5 454 aa10.01□□□□□ -0.81
CPSF7-216ENST00000536548 WDR43Q15061 677 aaKnown RBP eCLIP10□□□□□ -0.81
CPSF7-216ENST00000536548 TNS4Q8IZW8 715 aa10□□□□□ -0.81
CPSF7-216ENST00000536548 NGEFQ8N5V2 710 aa10□□□□□ -0.81
CPSF7-216ENST00000536548 UBE2Q2Q8WVN8 375 aa10□□□□□ -0.81
CPSF7-216ENST00000536548 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
CPSF7-216ENST00000536548 LRRC37A3O60309 1634 aa10□□□□□ -0.81
CPSF7-216ENST00000536548 ATP7BP35670 1465 aa9.99□□□□□ -0.81
CPSF7-216ENST00000536548 PLIN1O60240 522 aa9.99□□□□□ -0.81
CPSF7-216ENST00000536548 BECN1Q14457 450 aa9.99□□□□□ -0.81
CPSF7-216ENST00000536548 RGL3Q3MIN7 710 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms