RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 SHANK3Q9BYB0 1731 aa19.28■□□□□ 0.68
CLNS1A-211ENST00000532069 USP19O94966 1318 aa19.27■□□□□ 0.68
CLNS1A-211ENST00000532069 POLR3AO14802 1390 aaPredicted RBP19.27■□□□□ 0.68
CLNS1A-211ENST00000532069 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
CLNS1A-211ENST00000532069 GCP02774 474 aa19.25■□□□□ 0.67
CLNS1A-211ENST00000532069 POLD1P28340 1107 aa19.25■□□□□ 0.67
CLNS1A-211ENST00000532069 TOM1L2Q6ZVM7 507 aa19.25■□□□□ 0.67
CLNS1A-211ENST00000532069 MPHOSPH9Q99550 1183 aa19.25■□□□□ 0.67
CLNS1A-211ENST00000532069 ACEP12821 1306 aa19.25■□□□□ 0.67
CLNS1A-211ENST00000532069 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
CLNS1A-211ENST00000532069 GRIN3BO60391 1043 aa19.24■□□□□ 0.67
CLNS1A-211ENST00000532069 KLHL34Q8N239 644 aa19.22■□□□□ 0.67
CLNS1A-211ENST00000532069 SLC16A10Q8TF71 515 aa19.22■□□□□ 0.67
CLNS1A-211ENST00000532069 CCDC61Q9Y6R9 512 aa19.22■□□□□ 0.67
CLNS1A-211ENST00000532069 BRD4O60885 1362 aaPredicted RBP19.21■□□□□ 0.67
CLNS1A-211ENST00000532069 HSPA6P17066 643 aa19.21■□□□□ 0.67
CLNS1A-211ENST00000532069 MARCH10Q8NA82 808 aaPredicted RBP19.21■□□□□ 0.67
CLNS1A-211ENST00000532069 ZBTB7CA1YPR0 619 aa19.2■□□□□ 0.66
CLNS1A-211ENST00000532069 PTF1AQ7RTS3 328 aa19.2■□□□□ 0.66
CLNS1A-211ENST00000532069 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
CLNS1A-211ENST00000532069 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
CLNS1A-211ENST00000532069 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
CLNS1A-211ENST00000532069 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
CLNS1A-211ENST00000532069 EXOC5O00471 708 aa19.18■□□□□ 0.66
CLNS1A-211ENST00000532069 GPBP1L1Q9HC44 474 aaPredicted RBP19.18■□□□□ 0.66
CLNS1A-211ENST00000532069 PAPPAQ13219 1627 aa19.18■□□□□ 0.66
CLNS1A-211ENST00000532069 QSER1Q2KHR3 1735 aa19.17■□□□□ 0.66
CLNS1A-211ENST00000532069 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
CLNS1A-211ENST00000532069 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
CLNS1A-211ENST00000532069 CDK19Q9BWU1 502 aa19.17■□□□□ 0.66
CLNS1A-211ENST00000532069 ATP10DQ9P241 1426 aa19.15■□□□□ 0.66
CLNS1A-211ENST00000532069 COL24A1Q17RW2 1714 aa19.14■□□□□ 0.65
CLNS1A-211ENST00000532069 GOLGB1Q14789 3259 aaKnown RBP19.13■□□□□ 0.65
CLNS1A-211ENST00000532069 SLIT3O75094 1523 aa19.12■□□□□ 0.65
CLNS1A-211ENST00000532069 TNS2Q63HR2 1409 aa19.12■□□□□ 0.65
CLNS1A-211ENST00000532069 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
CLNS1A-211ENST00000532069 CARD10Q9BWT7 1032 aa19.12■□□□□ 0.65
CLNS1A-211ENST00000532069 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
CLNS1A-211ENST00000532069 COL18A1P39060 1754 aa19.11■□□□□ 0.65
CLNS1A-211ENST00000532069 NLRP6P59044 892 aa19.1■□□□□ 0.65
CLNS1A-211ENST00000532069 BTAF1O14981 1849 aa19.09■□□□□ 0.65
CLNS1A-211ENST00000532069 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.64
CLNS1A-211ENST00000532069 PPIP5K1Q6PFW1 1433 aa19.08■□□□□ 0.64
CLNS1A-211ENST00000532069 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
CLNS1A-211ENST00000532069 ABCC6O95255 1503 aa19.07■□□□□ 0.64
CLNS1A-211ENST00000532069 ZNF827Q17R98 1081 aa19.07■□□□□ 0.64
CLNS1A-211ENST00000532069 SLC27A3Q5K4L6 730 aa19.07■□□□□ 0.64
CLNS1A-211ENST00000532069 USP6P35125 1406 aa19.07■□□□□ 0.64
CLNS1A-211ENST00000532069 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
CLNS1A-211ENST00000532069 NLGN2Q8NFZ4 835 aa19.06■□□□□ 0.64
CLNS1A-211ENST00000532069 KDM2AQ9Y2K7 1162 aa19.06■□□□□ 0.64
CLNS1A-211ENST00000532069 KAT6BQ8WYB5 2073 aa19.05■□□□□ 0.64
CLNS1A-211ENST00000532069 APLP1P51693 650 aa19.05■□□□□ 0.64
CLNS1A-211ENST00000532069 DCAF11Q8TEB1 546 aa19.05■□□□□ 0.64
CLNS1A-211ENST00000532069 ACSBG1Q96GR2 724 aa19.05■□□□□ 0.64
CLNS1A-211ENST00000532069 RGPD5Q99666 1765 aa19.05■□□□□ 0.64
CLNS1A-211ENST00000532069 YBX3P16989 372 aaKnown RBP eCLIP19.04■□□□□ 0.645e-7■□□□□ 9.2
CLNS1A-211ENST00000532069 SRPK2P78362 688 aaKnown RBP19.04■□□□□ 0.64
CLNS1A-211ENST00000532069 AKT1S1Q96B36 256 aa19.03■□□□□ 0.64
CLNS1A-211ENST00000532069 TFCP2L1Q9NZI6 479 aa19.03■□□□□ 0.64
CLNS1A-211ENST00000532069 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
CLNS1A-211ENST00000532069 QRICH2Q9H0J4 1663 aa19.03■□□□□ 0.64
CLNS1A-211ENST00000532069 ADCY9O60503 1353 aa19.01■□□□□ 0.63
CLNS1A-211ENST00000532069 PNPLA7Q6ZV29 1317 aa19■□□□□ 0.63
CLNS1A-211ENST00000532069 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
CLNS1A-211ENST00000532069 ZNF526Q8TF50 670 aaPredicted RBP19■□□□□ 0.63
CLNS1A-211ENST00000532069 LRRC4BQ9NT99 713 aa19■□□□□ 0.63
CLNS1A-211ENST00000532069 PIK3C2AO00443 1686 aa19■□□□□ 0.63
CLNS1A-211ENST00000532069 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
CLNS1A-211ENST00000532069 HMGB2P26583 209 aaKnown RBP18.97■□□□□ 0.63
CLNS1A-211ENST00000532069 IL2RBP14784 551 aa18.96■□□□□ 0.63
CLNS1A-211ENST00000532069 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
CLNS1A-211ENST00000532069 KIAA1210Q9ULL0 1709 aa18.96■□□□□ 0.63
CLNS1A-211ENST00000532069 MSH5O43196 834 aa18.94■□□□□ 0.62
CLNS1A-211ENST00000532069 ZNF692Q9BU19 519 aaPredicted RBP18.92■□□□□ 0.62
CLNS1A-211ENST00000532069 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
CLNS1A-211ENST00000532069 CABP1Q9NZU7 370 aa18.92■□□□□ 0.62
CLNS1A-211ENST00000532069 NLRP2Q9NX02 1062 aa18.91■□□□□ 0.62
CLNS1A-211ENST00000532069 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
CLNS1A-211ENST00000532069 LY75O60449 1722 aa18.91■□□□□ 0.62
CLNS1A-211ENST00000532069 KIF3CO14782 793 aa18.9■□□□□ 0.62
CLNS1A-211ENST00000532069 SOX12O15370 315 aa18.9■□□□□ 0.62
CLNS1A-211ENST00000532069 TOMM70O94826 608 aa18.9■□□□□ 0.62
CLNS1A-211ENST00000532069 CENPJQ9HC77 1338 aaPredicted RBP18.9■□□□□ 0.62
CLNS1A-211ENST00000532069 CAPN15O75808 1086 aa18.89■□□□□ 0.61
CLNS1A-211ENST00000532069 PRELPP51888 382 aa18.89■□□□□ 0.61
CLNS1A-211ENST00000532069 DNAJC5GQ8N7S2 189 aa18.89■□□□□ 0.61
CLNS1A-211ENST00000532069 NFAT5O94916 1531 aa18.89■□□□□ 0.61
CLNS1A-211ENST00000532069 TNS4Q8IZW8 715 aa18.88■□□□□ 0.61
CLNS1A-211ENST00000532069 FLAD1Q8NFF5 587 aa18.88■□□□□ 0.61
CLNS1A-211ENST00000532069 ERBB3P21860 1342 aa18.88■□□□□ 0.61
CLNS1A-211ENST00000532069 WDR90Q96KV7 1748 aa18.88■□□□□ 0.61
CLNS1A-211ENST00000532069 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
CLNS1A-211ENST00000532069 SYTL4Q96C24 671 aaPredicted RBP18.86■□□□□ 0.61
CLNS1A-211ENST00000532069 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
CLNS1A-211ENST00000532069 ANKRD36BQ8N2N9 1353 aa18.84■□□□□ 0.61
CLNS1A-211ENST00000532069 ADRA2BP18089 450 aa18.84■□□□□ 0.61
CLNS1A-211ENST00000532069 COL13A1Q5TAT6 717 aaPredicted RBP18.84■□□□□ 0.61
CLNS1A-211ENST00000532069 COL23A1Q86Y22 540 aaPredicted RBP18.84■□□□□ 0.61
CLNS1A-211ENST00000532069 LTN1O94822 1766 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms