RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 LRRC37A3O60309 1634 aa21.55■■□□□ 1.04
PCM1-218ENST00000523055 CRB1P82279 1406 aa21.54■■□□□ 1.04
PCM1-218ENST00000523055 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
PCM1-218ENST00000523055 BCL11BQ9C0K0 894 aaPredicted RBP21.52■■□□□ 1.04
PCM1-218ENST00000523055 BCL9O00512 1426 aa21.49■■□□□ 1.03
PCM1-218ENST00000523055 NLRP13Q86W25 1043 aa21.49■■□□□ 1.03
PCM1-218ENST00000523055 SGIP1Q9BQI5 828 aa21.49■■□□□ 1.03
PCM1-218ENST00000523055 SYT17Q9BSW7 474 aa21.49■■□□□ 1.03
PCM1-218ENST00000523055 CABP2Q9NPB3 220 aa21.49■■□□□ 1.03
PCM1-218ENST00000523055 ATF5Q9Y2D1 282 aaPredicted RBP21.49■■□□□ 1.03
PCM1-218ENST00000523055 MARCH10Q8NA82 808 aaPredicted RBP21.48■■□□□ 1.03
PCM1-218ENST00000523055 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
PCM1-218ENST00000523055 SRPK2P78362 688 aaKnown RBP21.47■■□□□ 1.03
PCM1-218ENST00000523055 DDB1Q16531 1140 aa21.47■■□□□ 1.03
PCM1-218ENST00000523055 AATKQ6ZMQ8 1374 aa21.47■■□□□ 1.03
PCM1-218ENST00000523055 CARD11Q9BXL7 1154 aa21.46■■□□□ 1.03
PCM1-218ENST00000523055 PPIP5K1Q6PFW1 1433 aa21.46■■□□□ 1.03
PCM1-218ENST00000523055 COL18A1P39060 1754 aa21.46■■□□□ 1.03
PCM1-218ENST00000523055 SENP3-EIF4A1A0A087X0R7 540 aa21.45■■□□□ 1.02
PCM1-218ENST00000523055 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
PCM1-218ENST00000523055 AXIN2Q9Y2T1 843 aa21.45■■□□□ 1.02
PCM1-218ENST00000523055 CHD4Q14839 1912 aa21.44■■□□□ 1.02
PCM1-218ENST00000523055 GOLGB1Q14789 3259 aaKnown RBP21.44■■□□□ 1.02
PCM1-218ENST00000523055 SLIT3O75094 1523 aa21.44■■□□□ 1.02
PCM1-218ENST00000523055 TXNRD1Q16881 649 aa21.44■■□□□ 1.02
PCM1-218ENST00000523055 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
PCM1-218ENST00000523055 SLC15A2Q16348 729 aa21.43■■□□□ 1.02
PCM1-218ENST00000523055 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
PCM1-218ENST00000523055 TOM1L2Q6ZVM7 507 aa21.41■■□□□ 1.02
PCM1-218ENST00000523055 CEP350Q5VT06 3117 aa21.41■■□□□ 1.02
PCM1-218ENST00000523055 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
PCM1-218ENST00000523055 WDR17Q8IZU2 1322 aa21.4■■□□□ 1.02
PCM1-218ENST00000523055 MTFR1LQ9H019 292 aa21.4■■□□□ 1.02
PCM1-218ENST00000523055 STK32BQ9NY57 414 aa21.4■■□□□ 1.02
PCM1-218ENST00000523055 BRD4O60885 1362 aaPredicted RBP21.4■■□□□ 1.02
PCM1-218ENST00000523055 ZBTB7CA1YPR0 619 aa21.38■■□□□ 1.01
PCM1-218ENST00000523055 NLRP6P59044 892 aa21.38■■□□□ 1.01
PCM1-218ENST00000523055 USP6P35125 1406 aa21.38■■□□□ 1.01
PCM1-218ENST00000523055 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
PCM1-218ENST00000523055 CABP1Q9NZU7 370 aa21.37■■□□□ 1.01
PCM1-218ENST00000523055 CLSPNQ9HAW4 1339 aa21.36■■□□□ 1.01
PCM1-218ENST00000523055 IFFO2Q5TF58 517 aa21.36■■□□□ 1.01
PCM1-218ENST00000523055 CDCA7Q9BWT1 371 aaPredicted RBP21.36■■□□□ 1.01
PCM1-218ENST00000523055 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
PCM1-218ENST00000523055 PIK3C2AO00443 1686 aa21.35■■□□□ 1.01
PCM1-218ENST00000523055 PAPPAQ13219 1627 aa21.35■■□□□ 1.01
PCM1-218ENST00000523055 MON2Q7Z3U7 1717 aa21.35■■□□□ 1.01
PCM1-218ENST00000523055 CPSF1Q10570 1443 aaKnown RBP21.34■■□□□ 1.01
PCM1-218ENST00000523055 ARHGEF25Q86VW2 580 aa21.34■■□□□ 1.01
PCM1-218ENST00000523055 ARXQ96QS3 562 aa21.33■■□□□ 1.01
PCM1-218ENST00000523055 CARD10Q9BWT7 1032 aa21.33■■□□□ 1.01
PCM1-218ENST00000523055 RGPD5Q99666 1765 aa21.32■■□□□ 1
PCM1-218ENST00000523055 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
PCM1-218ENST00000523055 ST20-MTHFSA0A0A6YYL1 179 aa21.29■■□□□ 1
PCM1-218ENST00000523055 TNS2Q63HR2 1409 aa21.29■■□□□ 1
PCM1-218ENST00000523055 EXOC5O00471 708 aa21.29■■□□□ 1
PCM1-218ENST00000523055 TESK2Q96S53 571 aa21.29■■□□□ 1
PCM1-218ENST00000523055 NHSQ6T4R5 1651 aa21.28■■□□□ 1
PCM1-218ENST00000523055 USP47Q96K76 1375 aa21.28■■□□□ 1
PCM1-218ENST00000523055 ZNF827Q17R98 1081 aa21.28■■□□□ 1
PCM1-218ENST00000523055 CD163L1Q9NR16 1453 aa21.27■■□□□ 1
PCM1-218ENST00000523055 ACSBG1Q96GR2 724 aa21.25■□□□□ 0.99
PCM1-218ENST00000523055 LRRC4BQ9NT99 713 aa21.25■□□□□ 0.99
PCM1-218ENST00000523055 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
PCM1-218ENST00000523055 NFAT5O94916 1531 aa21.24■□□□□ 0.99
PCM1-218ENST00000523055 CCDC7Q96M83 1385 aa21.24■□□□□ 0.99
PCM1-218ENST00000523055 CSB-PGBD3P0DP91 1061 aa21.23■□□□□ 0.99
PCM1-218ENST00000523055 TTC21BQ7Z4L5 1316 aa21.23■□□□□ 0.99
PCM1-218ENST00000523055 ABCC6O95255 1503 aa21.23■□□□□ 0.99
PCM1-218ENST00000523055 SHANK3Q9BYB0 1731 aa21.23■□□□□ 0.99
PCM1-218ENST00000523055 GIGYF1O75420 1035 aaPredicted RBP21.22■□□□□ 0.99
PCM1-218ENST00000523055 GPR162Q16538 588 aa21.22■□□□□ 0.99
PCM1-218ENST00000523055 KCNH5Q8NCM2 988 aa21.22■□□□□ 0.99
PCM1-218ENST00000523055 COL24A1Q17RW2 1714 aa21.22■□□□□ 0.99
PCM1-218ENST00000523055 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
PCM1-218ENST00000523055 SOX12O15370 315 aa21.21■□□□□ 0.99
PCM1-218ENST00000523055 BTAF1O14981 1849 aa21.21■□□□□ 0.99
PCM1-218ENST00000523055 TMC1Q8TDI8 760 aa21.21■□□□□ 0.99
PCM1-218ENST00000523055 AKT1S1Q96B36 256 aa21.21■□□□□ 0.99
PCM1-218ENST00000523055 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
PCM1-218ENST00000523055 USP54Q70EL1 1684 aa21.19■□□□□ 0.98
PCM1-218ENST00000523055 ZNF692Q9BU19 519 aaPredicted RBP21.18■□□□□ 0.98
PCM1-218ENST00000523055 A0A1W2PP64 1363 aa21.17■□□□□ 0.98
PCM1-218ENST00000523055 NLGN2Q8NFZ4 835 aa21.17■□□□□ 0.98
PCM1-218ENST00000523055 ERBB3P21860 1342 aa21.16■□□□□ 0.98
PCM1-218ENST00000523055 PNPLA7Q6ZV29 1317 aa21.16■□□□□ 0.98
PCM1-218ENST00000523055 QSER1Q2KHR3 1735 aa21.16■□□□□ 0.98
PCM1-218ENST00000523055 TTC21AQ8NDW8 1320 aa21.15■□□□□ 0.98
PCM1-218ENST00000523055 SLC16A10Q8TF71 515 aa21.15■□□□□ 0.98
PCM1-218ENST00000523055 LTN1O94822 1766 aa21.15■□□□□ 0.98
PCM1-218ENST00000523055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.14■□□□□ 0.982e-9■■□□□ 14.3
PCM1-218ENST00000523055 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.97
PCM1-218ENST00000523055 TUBGCP6Q96RT7 1819 aa21.13■□□□□ 0.97
PCM1-218ENST00000523055 IL2RBP14784 551 aa21.12■□□□□ 0.97
PCM1-218ENST00000523055 YBX3P16989 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCM1-218ENST00000523055 KLHL34Q8N239 644 aa21.12■□□□□ 0.97
PCM1-218ENST00000523055 PUS7Q96PZ0 661 aaKnown RBP21.12■□□□□ 0.97
PCM1-218ENST00000523055 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
PCM1-218ENST00000523055 TMF1P82094 1093 aa21.12■□□□□ 0.97
PCM1-218ENST00000523055 NME9Q86XW9 330 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms