RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	PLIN1	O60240	522 aa		12.36	□□□□□ -0.43
TCF7-223	ENST00000522653	LDHC	P07864	332 aa		12.36	□□□□□ -0.43
TCF7-223	ENST00000522653	FAM177B	A6PVY3	158 aa		12.36	□□□□□ -0.43
TCF7-223	ENST00000522653	CLASRP	Q8N2M8	674 aa	Known RBP	12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	HOOK2	Q96ED9	719 aa		12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	PIP4K2A	P48426	406 aa	Predicted RBP	12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	EPS15	P42566	896 aa		12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	GOLGA6L1	Q8N7Z2	621 aa		12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	CCDC61	Q9Y6R9	512 aa		12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	UHRF1BP1	Q6BDS2	1440 aa		12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	CREBRF	Q8IUR6	639 aa		12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	PARP3	Q9Y6F1	533 aa		12.35	□□□□□ -0.43
TCF7-223	ENST00000522653	CCDC141	Q6ZP82	1450 aa		12.34	□□□□□ -0.43
TCF7-223	ENST00000522653	KRT28	Q7Z3Y7	464 aa		12.34	□□□□□ -0.43
TCF7-223	ENST00000522653	PPP1R42	Q7Z4L9	355 aa		12.34	□□□□□ -0.43
TCF7-223	ENST00000522653	JDP2	Q8WYK2	163 aa		12.34	□□□□□ -0.43
TCF7-223	ENST00000522653	AKAP2	Q9Y2D5	859 aa		12.34	□□□□□ -0.43
TCF7-223	ENST00000522653	TIAM1	Q13009	1591 aa		12.34	□□□□□ -0.43
TCF7-223	ENST00000522653	BACH2	Q9BYV9	841 aa		12.33	□□□□□ -0.44
TCF7-223	ENST00000522653	IFIT1	P09914	478 aa	Known RBP	12.33	□□□□□ -0.44
TCF7-223	ENST00000522653	FOXD4L1	Q9NU39	408 aa		12.33	□□□□□ -0.44
TCF7-223	ENST00000522653	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
TCF7-223	ENST00000522653	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.33	□□□□□ -0.44
TCF7-223	ENST00000522653	ANO2	Q9NQ90	1003 aa		12.32	□□□□□ -0.44
TCF7-223	ENST00000522653	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.32	□□□□□ -0.44
TCF7-223	ENST00000522653	ABCA10	Q8WWZ4	1543 aa		12.32	□□□□□ -0.44
TCF7-223	ENST00000522653	ZNF772	Q68DY9	489 aa	Predicted RBP	12.32	□□□□□ -0.44
TCF7-223	ENST00000522653	CNTROB	Q8N137	903 aa		12.32	□□□□□ -0.44
TCF7-223	ENST00000522653	ATP2B2	Q01814	1243 aa		12.32	□□□□□ -0.44
TCF7-223	ENST00000522653	SYCP1	Q15431	976 aa		12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	ERBIN	Q96RT1	1412 aa		12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	CCDC146	Q8IYE0	955 aa		12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	CDC5L	Q99459	802 aa	Known RBP	12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	AMOTL2	Q9Y2J4	779 aa		12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	NASP	P49321	788 aa	Predicted RBP	12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	DDX46	Q7L014	1031 aa	Known RBP	12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	PEG3	Q9GZU2	1588 aa		12.31	□□□□□ -0.44
TCF7-223	ENST00000522653	CCDC66	A2RUB6	948 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	TRAK2	O60296	914 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	KRT18	P05783	430 aa	Known RBP	12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	CCDC173	Q0VFZ6	552 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	CABP5	Q9NP86	173 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	RBM27	Q9P2N5	1060 aa	Known RBP	12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	EYA3	Q99504	573 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	NYX	Q9GZU5	481 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	CEP126	Q9P2H0	1117 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	CCT4	P50991	539 aa	Known RBP	12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	DHX37	Q8IY37	1157 aa	Known RBP	12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	FLAD1	Q8NFF5	587 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	ANKIB1	Q9P2G1	1089 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	GRIN2A	Q12879	1464 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	PDE6B	P35913	854 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	GSTO1	P78417	241 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	C8orf37	Q96NL8	207 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	CCDC39	Q9UFE4	941 aa		12.3	□□□□□ -0.44
TCF7-223	ENST00000522653	BICDL1	Q6ZP65	573 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	CUL5	Q93034	780 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	CTNNA3	Q9UI47	895 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	ZC3H6	P61129	1189 aa	Known RBP	12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	OGFOD1	Q8N543	542 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	KIF14	Q15058	1648 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	HDGFL1	Q5TGJ6	251 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	IQGAP2	Q13576	1575 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	TEX35	Q5T0J7	233 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	MCTP1	Q6DN14	999 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	NUDT16	Q96DE0	195 aa	Known RBP	12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	MYO6	Q9UM54	1294 aa		12.29	□□□□□ -0.44
TCF7-223	ENST00000522653	BTBD11	A6QL63	1104 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	ELL2	O00472	640 aa	Predicted RBP	12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	ZNF76	P36508	570 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	SCLT1	Q96NL6	688 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	GGNBP2	Q9H3C7	697 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	HLA-DOA	P06340	250 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	TRIM22	Q8IYM9	498 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	DRC1	Q96MC2	740 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	CUL7	Q14999	1698 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	TXLNB	Q8N3L3	684 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	ZMYND15	Q9H091	742 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	SET	Q01105	290 aa	Predicted RBP	12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	MAP3K1	Q13233	1512 aa		12.28	□□□□□ -0.44
TCF7-223	ENST00000522653	ESPN	B1AK53	854 aa		12.27	□□□□□ -0.44
TCF7-223	ENST00000522653	SSFA2	P28290	1259 aa		12.27	□□□□□ -0.44
TCF7-223	ENST00000522653	GOLGA6L19	H0YKK7	550 aa		12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	TNNI2	P48788	182 aa		12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	HMGN5	P82970	282 aa	Known RBP	12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	ANKRD45	Q5TZF3	282 aa		12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	CDR1	P51861	262 aa		12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	FSD1	Q9BTV5	496 aa		12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	RAI14	Q9P0K7	980 aa		12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	CT47B1	P0C2W7	299 aa	Predicted RBP	12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	TMEM132E	Q6IEE7	984 aa		12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	ZGPAT	Q8N5A5	531 aa	Known RBP	12.27	□□□□□ -0.45
TCF7-223	ENST00000522653	OFD1	O75665	1012 aa		12.26	□□□□□ -0.45
TCF7-223	ENST00000522653	DDB1	Q16531	1140 aa		12.26	□□□□□ -0.45
TCF7-223	ENST00000522653	DZIP1L	Q8IYY4	767 aa	Known RBP	12.26	□□□□□ -0.45
TCF7-223	ENST00000522653	SUPT20H	Q8NEM7	779 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 1335.9 ms