RNA–Protein interactions for RNA: ENST00000519142.5

FAM49B-213, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-213ENST00000519142 VASH1Q7L8A9 365 aaPredicted RBP8.71□□□□□ -1.02
FAM49B-213ENST00000519142 SEPT12Q8IYM1 358 aa8.71□□□□□ -1.02
FAM49B-213ENST00000519142 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
FAM49B-213ENST00000519142 PHTF2Q8N3S3 785 aa8.7□□□□□ -1.02
FAM49B-213ENST00000519142 KCTD15Q96SI1 283 aaPredicted RBP8.7□□□□□ -1.02
FAM49B-213ENST00000519142 PPP1R12CQ9BZL4 782 aa8.7□□□□□ -1.02
FAM49B-213ENST00000519142 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
FAM49B-213ENST00000519142 ATP9BO43861 1147 aa8.69□□□□□ -1.02
FAM49B-213ENST00000519142 GDF9O60383 454 aa8.69□□□□□ -1.02
FAM49B-213ENST00000519142 FOXC1Q12948 553 aa8.69□□□□□ -1.02
FAM49B-213ENST00000519142 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
FAM49B-213ENST00000519142 RNF135Q8IUD6 432 aa8.69□□□□□ -1.02
FAM49B-213ENST00000519142 ARID3AQ99856 593 aa8.69□□□□□ -1.02
FAM49B-213ENST00000519142 CHIC2Q9UKJ5 165 aa8.69□□□□□ -1.02
FAM49B-213ENST00000519142 GIGYF1O75420 1035 aaPredicted RBP8.68□□□□□ -1.02
FAM49B-213ENST00000519142 ADH1CP00326 375 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 FSHRP23945 695 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 PRR20EP86478 221 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 PRR20CP86479 221 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 PRR20DP86480 221 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 PRR20BP86481 221 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 PRR20AP86496 221 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 INTS6LQ5JSJ4 861 aaKnown RBP8.68□□□□□ -1.02
FAM49B-213ENST00000519142 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 TBC1D9Q6ZT07 1266 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
FAM49B-213ENST00000519142 ARID5BQ14865 1188 aa8.67□□□□□ -1.02
FAM49B-213ENST00000519142 MAFBQ9Y5Q3 323 aaPredicted RBP8.67□□□□□ -1.02
FAM49B-213ENST00000519142 USP17L5A8MUK1 530 aa8.66□□□□□ -1.02
FAM49B-213ENST00000519142 SKIP12755 728 aa8.66□□□□□ -1.02
FAM49B-213ENST00000519142 GRM5P41594 1212 aa8.66□□□□□ -1.02
FAM49B-213ENST00000519142 NR5A1Q13285 461 aa8.66□□□□□ -1.02
FAM49B-213ENST00000519142 MAP7D1Q3KQU3 841 aa8.66□□□□□ -1.02
FAM49B-213ENST00000519142 TRIM67Q6ZTA4 783 aa8.66□□□□□ -1.02
FAM49B-213ENST00000519142 PLPP7Q8NBV4 271 aa8.66□□□□□ -1.02
FAM49B-213ENST00000519142 SNIP1Q8TAD8 396 aaKnown RBP8.66□□□□□ -1.02
FAM49B-213ENST00000519142 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
FAM49B-213ENST00000519142 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
FAM49B-213ENST00000519142 TRAF7Q6Q0C0 670 aa8.65□□□□□ -1.02
FAM49B-213ENST00000519142 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
FAM49B-213ENST00000519142 CCDC85AQ96PX6 553 aaPredicted RBP8.65□□□□□ -1.02
FAM49B-213ENST00000519142 ALDH1A1P00352 501 aa8.64□□□□□ -1.03
FAM49B-213ENST00000519142 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
FAM49B-213ENST00000519142 TOR4AQ9NXH8 423 aa8.64□□□□□ -1.03
FAM49B-213ENST00000519142 DOLKQ9UPQ8 538 aa8.64□□□□□ -1.03
FAM49B-213ENST00000519142 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
FAM49B-213ENST00000519142 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
FAM49B-213ENST00000519142 LZTS3O60299 673 aaPredicted RBP8.63□□□□□ -1.03
FAM49B-213ENST00000519142 USP17L2Q6R6M4 530 aa8.63□□□□□ -1.03
FAM49B-213ENST00000519142 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
FAM49B-213ENST00000519142 CCDC116Q8IYX3 515 aa8.63□□□□□ -1.03
FAM49B-213ENST00000519142 CYP4X1Q8N118 509 aa8.63□□□□□ -1.03
FAM49B-213ENST00000519142 TTC24A2A3L6 582 aaPredicted RBP8.62□□□□□ -1.03
FAM49B-213ENST00000519142 LMOD1P29536 600 aaPredicted RBP8.62□□□□□ -1.03
FAM49B-213ENST00000519142 RAB15P59190 212 aa8.62□□□□□ -1.03
FAM49B-213ENST00000519142 WASF2Q9Y6W5 498 aa8.62□□□□□ -1.03
FAM49B-213ENST00000519142 ERVH48-1M5A8F1 160 aa8.61□□□□□ -1.03
FAM49B-213ENST00000519142 NR3C2P08235 984 aa8.61□□□□□ -1.03
FAM49B-213ENST00000519142 NNTQ13423 1086 aa8.61□□□□□ -1.03
FAM49B-213ENST00000519142 NCOA4Q13772 614 aa8.61□□□□□ -1.03
FAM49B-213ENST00000519142 EML3Q32P44 896 aa8.61□□□□□ -1.03
FAM49B-213ENST00000519142 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
FAM49B-213ENST00000519142 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
FAM49B-213ENST00000519142 J3QL48 77 aa8.6□□□□□ -1.03
FAM49B-213ENST00000519142 PPP1R15AO75807 674 aaPredicted RBP8.6□□□□□ -1.03
FAM49B-213ENST00000519142 RFX1P22670 979 aa8.6□□□□□ -1.03
FAM49B-213ENST00000519142 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
FAM49B-213ENST00000519142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.59□□□□□ -1.03
FAM49B-213ENST00000519142 SRPK2P78362 688 aaKnown RBP8.59□□□□□ -1.03
FAM49B-213ENST00000519142 TSGA10IPQ3SY00 556 aa8.59□□□□□ -1.03
FAM49B-213ENST00000519142 OXLD1Q5BKU9 147 aa8.59□□□□□ -1.03
FAM49B-213ENST00000519142 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
FAM49B-213ENST00000519142 DEPDC4Q8N2C3 294 aa8.59□□□□□ -1.03
FAM49B-213ENST00000519142 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
FAM49B-213ENST00000519142 SMPD1P17405 629 aa8.58□□□□□ -1.04
FAM49B-213ENST00000519142 ERVK-9P63128 1117 aa8.58□□□□□ -1.04
FAM49B-213ENST00000519142 ZNF784Q8NCA9 323 aaPredicted RBP8.58□□□□□ -1.04
FAM49B-213ENST00000519142 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
FAM49B-213ENST00000519142 CDCA7Q9BWT1 371 aaPredicted RBP8.58□□□□□ -1.04
FAM49B-213ENST00000519142 PDZRN3Q9UPQ7 1066 aa8.58□□□□□ -1.04
FAM49B-213ENST00000519142 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
FAM49B-213ENST00000519142 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
FAM49B-213ENST00000519142 TMPRSS4Q9NRS4 437 aa8.57□□□□□ -1.04
FAM49B-213ENST00000519142 PGPEP1Q9NXJ5 209 aa8.57□□□□□ -1.04
FAM49B-213ENST00000519142 NOD1Q9Y239 953 aa8.57□□□□□ -1.04
FAM49B-213ENST00000519142 USP4Q13107 963 aa8.56□□□□□ -1.04
FAM49B-213ENST00000519142 CC2D2BQ6DHV5 1058 aa8.56□□□□□ -1.04
FAM49B-213ENST00000519142 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
FAM49B-213ENST00000519142 MYCP01106 439 aaPredicted RBP8.55□□□□□ -1.04
FAM49B-213ENST00000519142 SCTRP47872 440 aa8.55□□□□□ -1.04
FAM49B-213ENST00000519142 MYT1Q01538 1121 aa8.55□□□□□ -1.04
FAM49B-213ENST00000519142 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
FAM49B-213ENST00000519142 KLF16Q9BXK1 252 aaPredicted RBP8.55□□□□□ -1.04
FAM49B-213ENST00000519142 VRTNQ9H8Y1 702 aa8.55□□□□□ -1.04
FAM49B-213ENST00000519142 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
FAM49B-213ENST00000519142 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
FAM49B-213ENST00000519142 LILRA1O75019 489 aa8.54□□□□□ -1.04
FAM49B-213ENST00000519142 ATP1A2P50993 1020 aa8.54□□□□□ -1.04
FAM49B-213ENST00000519142 ITPKCQ96DU7 683 aa8.54□□□□□ -1.04
FAM49B-213ENST00000519142 ATG7O95352 703 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms