RNA–Protein interactions for RNA: ENST00000519142.5

FAM49B-213, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-213ENST00000519142 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
FAM49B-213ENST00000519142 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
FAM49B-213ENST00000519142 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
FAM49B-213ENST00000519142 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
FAM49B-213ENST00000519142 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
FAM49B-213ENST00000519142 FOXD1Q16676 465 aa17.43■□□□□ 0.38
FAM49B-213ENST00000519142 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
FAM49B-213ENST00000519142 ADRA2BP18089 450 aa16.91■□□□□ 0.3
FAM49B-213ENST00000519142 PIAS4Q8N2W9 510 aaPredicted RBP16.51■□□□□ 0.23
FAM49B-213ENST00000519142 MSH5O43196 834 aa16.03■□□□□ 0.16
FAM49B-213ENST00000519142 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
FAM49B-213ENST00000519142 KCNA4P22459 653 aa15.65■□□□□ 0.1
FAM49B-213ENST00000519142 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
FAM49B-213ENST00000519142 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
FAM49B-213ENST00000519142 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
FAM49B-213ENST00000519142 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
FAM49B-213ENST00000519142 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
FAM49B-213ENST00000519142 DMRT2Q9Y5R5 561 aa15.08■□□□□ 0
FAM49B-213ENST00000519142 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
FAM49B-213ENST00000519142 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
FAM49B-213ENST00000519142 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
FAM49B-213ENST00000519142 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
FAM49B-213ENST00000519142 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
FAM49B-213ENST00000519142 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
FAM49B-213ENST00000519142 ZBTB22O15209 634 aa14.41□□□□□ -0.1
FAM49B-213ENST00000519142 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
FAM49B-213ENST00000519142 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
FAM49B-213ENST00000519142 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
FAM49B-213ENST00000519142 POTEDQ86YR6 584 aa14.2□□□□□ -0.14
FAM49B-213ENST00000519142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
FAM49B-213ENST00000519142 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
FAM49B-213ENST00000519142 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
FAM49B-213ENST00000519142 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
FAM49B-213ENST00000519142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
FAM49B-213ENST00000519142 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
FAM49B-213ENST00000519142 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
FAM49B-213ENST00000519142 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
FAM49B-213ENST00000519142 APLP2Q06481 763 aa13.67□□□□□ -0.22
FAM49B-213ENST00000519142 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
FAM49B-213ENST00000519142 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
FAM49B-213ENST00000519142 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
FAM49B-213ENST00000519142 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
FAM49B-213ENST00000519142 CAPN15O75808 1086 aa13.39□□□□□ -0.27
FAM49B-213ENST00000519142 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
FAM49B-213ENST00000519142 POLA2Q14181 598 aa13.2□□□□□ -0.3
FAM49B-213ENST00000519142 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
FAM49B-213ENST00000519142 ABCB7O75027 752 aa13.15□□□□□ -0.3
FAM49B-213ENST00000519142 DSG3P32926 999 aa13.14□□□□□ -0.31
FAM49B-213ENST00000519142 FKBP8Q14318 412 aa13.09□□□□□ -0.31
FAM49B-213ENST00000519142 FBLN2P98095 1184 aa13.08□□□□□ -0.32
FAM49B-213ENST00000519142 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
FAM49B-213ENST00000519142 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
FAM49B-213ENST00000519142 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
FAM49B-213ENST00000519142 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
FAM49B-213ENST00000519142 PROM2Q8N271 834 aa12.76□□□□□ -0.37
FAM49B-213ENST00000519142 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
FAM49B-213ENST00000519142 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
FAM49B-213ENST00000519142 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
FAM49B-213ENST00000519142 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
FAM49B-213ENST00000519142 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
FAM49B-213ENST00000519142 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
FAM49B-213ENST00000519142 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
FAM49B-213ENST00000519142 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
FAM49B-213ENST00000519142 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
FAM49B-213ENST00000519142 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
FAM49B-213ENST00000519142 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
FAM49B-213ENST00000519142 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
FAM49B-213ENST00000519142 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
FAM49B-213ENST00000519142 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
FAM49B-213ENST00000519142 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
FAM49B-213ENST00000519142 IFNLR1Q8IU57 520 aaPredicted RBP12.24□□□□□ -0.45
FAM49B-213ENST00000519142 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
FAM49B-213ENST00000519142 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
FAM49B-213ENST00000519142 MIER1Q8N108 512 aa12.16□□□□□ -0.46
FAM49B-213ENST00000519142 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
FAM49B-213ENST00000519142 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
FAM49B-213ENST00000519142 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
FAM49B-213ENST00000519142 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
FAM49B-213ENST00000519142 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
FAM49B-213ENST00000519142 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
FAM49B-213ENST00000519142 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
FAM49B-213ENST00000519142 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
FAM49B-213ENST00000519142 PKD2Q13563 968 aa11.91□□□□□ -0.5
FAM49B-213ENST00000519142 CHRDL2Q6WN34 429 aa11.91□□□□□ -0.5
FAM49B-213ENST00000519142 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
FAM49B-213ENST00000519142 NUBP1P53384 320 aa11.86□□□□□ -0.51
FAM49B-213ENST00000519142 CHADLQ6NUI6 762 aa11.86□□□□□ -0.51
FAM49B-213ENST00000519142 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
FAM49B-213ENST00000519142 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
FAM49B-213ENST00000519142 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
FAM49B-213ENST00000519142 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
FAM49B-213ENST00000519142 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
FAM49B-213ENST00000519142 GSE1Q14687 1217 aa11.79□□□□□ -0.52
FAM49B-213ENST00000519142 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
FAM49B-213ENST00000519142 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
FAM49B-213ENST00000519142 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
FAM49B-213ENST00000519142 RASEFQ8IZ41 740 aa11.76□□□□□ -0.53
FAM49B-213ENST00000519142 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
FAM49B-213ENST00000519142 RGL2O15211 777 aa11.68□□□□□ -0.54
FAM49B-213ENST00000519142 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms