RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 RSPH6AQ9H0K4 717 aa6.63□□□□□ -1.35
CLINT1-202ENST00000518855 ISY1Q9ULR0 285 aaKnown RBP6.63□□□□□ -1.35
CLINT1-202ENST00000518855 FSD2A1L4K1 749 aa6.63□□□□□ -1.35
CLINT1-202ENST00000518855 FRAT1Q92837 279 aaPredicted RBP6.63□□□□□ -1.35
CLINT1-202ENST00000518855 MMRN1Q13201 1228 aa6.63□□□□□ -1.35
CLINT1-202ENST00000518855 SIGLEC1Q9BZZ2 1709 aa6.63□□□□□ -1.35
CLINT1-202ENST00000518855 PPIP5K1Q6PFW1 1433 aa6.63□□□□□ -1.35
CLINT1-202ENST00000518855 N4BP2Q86UW6 1770 aaPredicted RBP6.62□□□□□ -1.35
CLINT1-202ENST00000518855 RIMBP2O15034 1052 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 PDE4CQ08493 712 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 SALL2Q9Y467 1007 aaPredicted RBP6.62□□□□□ -1.35
CLINT1-202ENST00000518855 ZFYVE9O95405 1425 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 ASXL2Q76L83 1435 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 TUBGCP6Q96RT7 1819 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 WDR63Q8IWG1 891 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 NEXMIFQ5QGS0 1516 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 TULP4Q9NRJ4 1543 aa6.62□□□□□ -1.35
CLINT1-202ENST00000518855 PLIN1O60240 522 aa6.61□□□□□ -1.35
CLINT1-202ENST00000518855 DDIT3P35638 169 aa6.61□□□□□ -1.35
CLINT1-202ENST00000518855 ZNF326Q5BKZ1 582 aaKnown RBP6.61□□□□□ -1.35
CLINT1-202ENST00000518855 TBC1D32Q96NH3 1257 aa6.61□□□□□ -1.35
CLINT1-202ENST00000518855 ZNF777Q9ULD5 760 aaPredicted RBP6.61□□□□□ -1.35
CLINT1-202ENST00000518855 KNSTRNQ9Y448 316 aa6.61□□□□□ -1.35
CLINT1-202ENST00000518855 LAS1LQ9Y4W2 734 aaKnown RBP6.61□□□□□ -1.35
CLINT1-202ENST00000518855 SETD1AO15047 1707 aaKnown RBP6.61□□□□□ -1.35
CLINT1-202ENST00000518855 CLUAP1Q96AJ1 413 aa6.6□□□□□ -1.35
CLINT1-202ENST00000518855 NUDT7P0C024 238 aa6.6□□□□□ -1.35
CLINT1-202ENST00000518855 WDR43Q15061 677 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLINT1-202ENST00000518855 L1TD1Q5T7N2 865 aaKnown RBP6.6□□□□□ -1.35
CLINT1-202ENST00000518855 PMFBP1Q8TBY8 1022 aa6.6□□□□□ -1.35
CLINT1-202ENST00000518855 KDM2AQ9Y2K7 1162 aa6.6□□□□□ -1.35
CLINT1-202ENST00000518855 MLH3Q9UHC1 1453 aa6.59□□□□□ -1.35
CLINT1-202ENST00000518855 CC2D1BQ5T0F9 858 aaKnown RBP6.59□□□□□ -1.35
CLINT1-202ENST00000518855 ZSWIM6Q9HCJ5 1215 aa6.59□□□□□ -1.35
CLINT1-202ENST00000518855 NOS1P29475 1434 aa6.59□□□□□ -1.35
CLINT1-202ENST00000518855 PIK3R4Q99570 1358 aa6.59□□□□□ -1.36
CLINT1-202ENST00000518855 BRPF1P55201 1214 aaPredicted RBP6.58□□□□□ -1.36
CLINT1-202ENST00000518855 BECN1Q14457 450 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 TMC2Q8TDI7 906 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 IBTKQ9P2D0 1353 aaPredicted RBP6.58□□□□□ -1.36
CLINT1-202ENST00000518855 IGHDP01880 384 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
CLINT1-202ENST00000518855 BRPF3Q9ULD4 1205 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 IL16Q14005 1332 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 ABCC11Q96J66 1382 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 ARID3CA6NKF2 412 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 WWC1Q8IX03 1113 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 KNDC1Q76NI1 1749 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 NRKQ7Z2Y5 1582 aa6.58□□□□□ -1.36
CLINT1-202ENST00000518855 FRAT2O75474 233 aaPredicted RBP6.57□□□□□ -1.36
CLINT1-202ENST00000518855 HDAC1Q13547 482 aaPredicted RBP6.57□□□□□ -1.36
CLINT1-202ENST00000518855 CLEC17AQ6ZS10 378 aa6.57□□□□□ -1.36
CLINT1-202ENST00000518855 DLC1Q96QB1 1528 aa6.57□□□□□ -1.36
CLINT1-202ENST00000518855 RARSP54136 660 aaKnown RBP6.57□□□□□ -1.36
CLINT1-202ENST00000518855 EFCAB2Q5VUJ9 269 aa6.57□□□□□ -1.36
CLINT1-202ENST00000518855 RPGRIP1LQ68CZ1 1315 aa6.57□□□□□ -1.36
CLINT1-202ENST00000518855 CENPJQ9HC77 1338 aaPredicted RBP6.57□□□□□ -1.36
CLINT1-202ENST00000518855 CARD14Q9BXL6 1004 aa6.57□□□□□ -1.36
CLINT1-202ENST00000518855 ANKRD36BQ8N2N9 1353 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 DSG2Q14126 1118 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 SNX21Q969T3 373 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 PNPLA6Q8IY17 1366 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 TMEM131LA2VDJ0 1609 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 MON2Q7Z3U7 1717 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 CLCN1P35523 988 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 RUNDC1Q96C34 613 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 KIF16BQ96L93 1317 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 RICTORQ6R327 1708 aa6.56□□□□□ -1.36
CLINT1-202ENST00000518855 HOMEZQ8IX15 550 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 POLR3GLQ9BT43 218 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 PCDHGA4Q9Y5G9 962 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 PREX1Q8TCU6 1659 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 ITSN1Q15811 1721 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 RIMBP3CA6NJZ7 1639 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 RIMBP3BA6NNM3 1639 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 RBM25P49756 843 aaKnown RBP6.55□□□□□ -1.36
CLINT1-202ENST00000518855 AKAP12Q02952 1782 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 CD163L1Q9NR16 1453 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 RIMBP3Q9UFD9 1639 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 NSD3Q9BZ95 1437 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 PTMSP20962 102 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 POTEEQ6S8J3 1075 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 ZNF687Q8N1G0 1237 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 DLG5Q8TDM6 1919 aa6.55□□□□□ -1.36
CLINT1-202ENST00000518855 PTCH1Q13635 1447 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 CD109Q6YHK3 1445 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 GPHNQ9NQX3 736 aaPredicted RBP6.54□□□□□ -1.36
CLINT1-202ENST00000518855 LHX6Q9UPM6 363 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 MYO5BQ9ULV0 1848 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 PTPRMP28827 1452 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 KIF24Q5T7B8 1368 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 BCAR3O75815 825 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 AXIN2Q9Y2T1 843 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 APAF1O14727 1248 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 GTPBP6O43824 516 aaPredicted RBP6.54□□□□□ -1.36
CLINT1-202ENST00000518855 SKAP1Q86WV1 359 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 SMC5Q8IY18 1101 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 PLPP6Q8IY26 295 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 TBC1D2Q9BYX2 928 aa6.54□□□□□ -1.36
CLINT1-202ENST00000518855 NPATQ14207 1427 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms