RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 WFS1O76024 890 aa9.85□□□□□ -0.83
PABPC1-207ENST00000518716 PZPP20742 1482 aa9.85□□□□□ -0.83
PABPC1-207ENST00000518716 ADGBQ8N7X0 1667 aa9.84□□□□□ -0.83
PABPC1-207ENST00000518716 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
PABPC1-207ENST00000518716 ANKLE2Q86XL3 938 aa9.84□□□□□ -0.83
PABPC1-207ENST00000518716 POLR1AO95602 1720 aaPredicted RBP9.84□□□□□ -0.83
PABPC1-207ENST00000518716 SLC4A3P48751 1232 aa9.83□□□□□ -0.84
PABPC1-207ENST00000518716 THEMISQ8N1K5 641 aaPredicted RBP9.83□□□□□ -0.84
PABPC1-207ENST00000518716 STK17AQ9UEE5 414 aa9.83□□□□□ -0.84
PABPC1-207ENST00000518716 CCNB3Q8WWL7 1395 aa9.83□□□□□ -0.84
PABPC1-207ENST00000518716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.83□□□□□ -0.84
PABPC1-207ENST00000518716 NPHP4O75161 1426 aaPredicted RBP9.82□□□□□ -0.84
PABPC1-207ENST00000518716 FAM135AQ9P2D6 1515 aa9.82□□□□□ -0.84
PABPC1-207ENST00000518716 DEPDC5O75140 1603 aa9.82□□□□□ -0.84
PABPC1-207ENST00000518716 CRIPAKQ8N1N5 446 aa9.82□□□□□ -0.84
PABPC1-207ENST00000518716 PKD2L1Q9P0L9 805 aa9.82□□□□□ -0.84
PABPC1-207ENST00000518716 ARIH1Q9Y4X5 557 aaPredicted RBP9.82□□□□□ -0.84
PABPC1-207ENST00000518716 NLRP1Q9C000 1473 aa9.82□□□□□ -0.84
PABPC1-207ENST00000518716 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
PABPC1-207ENST00000518716 STRCP1A6NGW2 1772 aa9.81□□□□□ -0.84
PABPC1-207ENST00000518716 NFX1Q12986 1120 aaKnown RBP9.81□□□□□ -0.84
PABPC1-207ENST00000518716 KIF3BO15066 747 aa9.8□□□□□ -0.84
PABPC1-207ENST00000518716 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
PABPC1-207ENST00000518716 KDM5DQ9BY66 1539 aa9.8□□□□□ -0.84
PABPC1-207ENST00000518716 WIPF1O43516 503 aa9.79□□□□□ -0.84
PABPC1-207ENST00000518716 ACTN4O43707 911 aaKnown RBP9.79□□□□□ -0.84
PABPC1-207ENST00000518716 ADH1BP00325 375 aa9.79□□□□□ -0.84
PABPC1-207ENST00000518716 TIAM1Q13009 1591 aa9.79□□□□□ -0.84
PABPC1-207ENST00000518716 UGGT1Q9NYU2 1555 aa9.79□□□□□ -0.84
PABPC1-207ENST00000518716 WASHC2CQ9Y4E1 1318 aa9.79□□□□□ -0.84
PABPC1-207ENST00000518716 FOXC1Q12948 553 aa9.78□□□□□ -0.84
PABPC1-207ENST00000518716 E2F4Q16254 413 aa9.78□□□□□ -0.84
PABPC1-207ENST00000518716 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
PABPC1-207ENST00000518716 LCE2CQ5TA81 110 aa9.77□□□□□ -0.85
PABPC1-207ENST00000518716 RSPH4AQ5TD94 716 aa9.77□□□□□ -0.85
PABPC1-207ENST00000518716 IQGAP1P46940 1657 aa9.77□□□□□ -0.85
PABPC1-207ENST00000518716 MTUS2Q5JR59 1369 aa9.76□□□□□ -0.85
PABPC1-207ENST00000518716 AVPP01185 164 aa9.76□□□□□ -0.85
PABPC1-207ENST00000518716 RNF17Q9BXT8 1623 aaKnown RBP9.75□□□□□ -0.85
PABPC1-207ENST00000518716 ZC3H13Q5T200 1668 aaKnown RBP9.75□□□□□ -0.85
PABPC1-207ENST00000518716 CCDC141Q6ZP82 1450 aa9.75□□□□□ -0.85
PABPC1-207ENST00000518716 C11orf95C9JLR9 678 aaPredicted RBP9.75□□□□□ -0.85
PABPC1-207ENST00000518716 SYNMO15061 1565 aa9.75□□□□□ -0.85
PABPC1-207ENST00000518716 FAM135BQ49AJ0 1406 aa9.74□□□□□ -0.85
PABPC1-207ENST00000518716 ARHGAP23Q9P227 1491 aa9.74□□□□□ -0.85
PABPC1-207ENST00000518716 LTKP29376 864 aa9.74□□□□□ -0.85
PABPC1-207ENST00000518716 LMOD2Q6P5Q4 547 aa9.74□□□□□ -0.85
PABPC1-207ENST00000518716 POTEAQ6S8J7 498 aa9.74□□□□□ -0.85
PABPC1-207ENST00000518716 SLC6A16Q9GZN6 736 aa9.74□□□□□ -0.85
PABPC1-207ENST00000518716 NCOA2Q15596 1464 aa9.73□□□□□ -0.85
PABPC1-207ENST00000518716 ABCC3O15438 1527 aa9.73□□□□□ -0.85
PABPC1-207ENST00000518716 CFHP08603 1231 aa9.73□□□□□ -0.85
PABPC1-207ENST00000518716 DNAJB2P25686 324 aa9.73□□□□□ -0.85
PABPC1-207ENST00000518716 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
PABPC1-207ENST00000518716 KMT5BQ4FZB7 885 aa9.73□□□□□ -0.85
PABPC1-207ENST00000518716 TMEM134Q9H6X4 195 aa9.73□□□□□ -0.85
PABPC1-207ENST00000518716 TOR4AQ9NXH8 423 aa9.73□□□□□ -0.85
PABPC1-207ENST00000518716 XIRP1Q702N8 1843 aaKnown RBP9.72□□□□□ -0.85
PABPC1-207ENST00000518716 ERVK-7P63135 1459 aa9.72□□□□□ -0.85
PABPC1-207ENST00000518716 AXIN1O15169 862 aa9.72□□□□□ -0.85
PABPC1-207ENST00000518716 CAMSAP2Q08AD1 1489 aa9.72□□□□□ -0.85
PABPC1-207ENST00000518716 EHBP1L1Q8N3D4 1523 aa9.72□□□□□ -0.85
PABPC1-207ENST00000518716 ARHGEF5Q12774 1597 aa9.71□□□□□ -0.85
PABPC1-207ENST00000518716 LOC100996750A0A140TA64 210 aa9.71□□□□□ -0.86
PABPC1-207ENST00000518716 KRTAP4-6Q9BYQ5 205 aa9.71□□□□□ -0.86
PABPC1-207ENST00000518716 SCAF11Q99590 1463 aaKnown RBP9.71□□□□□ -0.86
PABPC1-207ENST00000518716 SLIT1O75093 1534 aa9.71□□□□□ -0.86
PABPC1-207ENST00000518716 MROH1Q8NDA8 1641 aa9.7□□□□□ -0.86
PABPC1-207ENST00000518716 UBR1Q8IWV7 1749 aa9.7□□□□□ -0.86
PABPC1-207ENST00000518716 NR1I2O75469 434 aa9.69□□□□□ -0.86
PABPC1-207ENST00000518716 SLC10A3P09131 477 aa9.69□□□□□ -0.86
PABPC1-207ENST00000518716 ARHGAP31Q2M1Z3 1444 aa9.68□□□□□ -0.86
PABPC1-207ENST00000518716 SMCPP49901 116 aaPredicted RBP9.68□□□□□ -0.86
PABPC1-207ENST00000518716 CTC1Q2NKJ3 1217 aa9.68□□□□□ -0.86
PABPC1-207ENST00000518716 TXNDC2Q86VQ3 553 aa9.68□□□□□ -0.86
PABPC1-207ENST00000518716 MAST1Q9Y2H9 1570 aa9.67□□□□□ -0.86
PABPC1-207ENST00000518716 TSPY4P0CV99 314 aa9.67□□□□□ -0.86
PABPC1-207ENST00000518716 TSPY10P0CW01 314 aa9.67□□□□□ -0.86
PABPC1-207ENST00000518716 SCUBE3Q8IX30 993 aa9.67□□□□□ -0.86
PABPC1-207ENST00000518716 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
PABPC1-207ENST00000518716 KCNA6P17658 529 aa9.66□□□□□ -0.86
PABPC1-207ENST00000518716 RPIAP49247 311 aa9.66□□□□□ -0.86
PABPC1-207ENST00000518716 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
PABPC1-207ENST00000518716 TMEM94Q12767 1356 aa9.65□□□□□ -0.86
PABPC1-207ENST00000518716 TMEM2Q9UHN6 1383 aa9.65□□□□□ -0.86
PABPC1-207ENST00000518716 TET3O43151 1660 aa9.65□□□□□ -0.86
PABPC1-207ENST00000518716 EIF2AK4Q9P2K8 1649 aaKnown RBP9.65□□□□□ -0.86
PABPC1-207ENST00000518716 CFAP65Q6ZU64 1925 aaKnown RBP9.65□□□□□ -0.86
PABPC1-207ENST00000518716 RCCD1A6NED2 376 aa9.65□□□□□ -0.86
PABPC1-207ENST00000518716 CYP4X1Q8N118 509 aa9.65□□□□□ -0.86
PABPC1-207ENST00000518716 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
PABPC1-207ENST00000518716 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
PABPC1-207ENST00000518716 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
PABPC1-207ENST00000518716 SPSB2Q99619 263 aa9.64□□□□□ -0.87
PABPC1-207ENST00000518716 TERTO14746 1132 aaKnown RBP9.63□□□□□ -0.87
PABPC1-207ENST00000518716 PUS10Q3MIT2 529 aaKnown RBP9.63□□□□□ -0.87
PABPC1-207ENST00000518716 ROBO1Q9Y6N7 1651 aa9.62□□□□□ -0.87
PABPC1-207ENST00000518716 PTGDRQ13258 359 aa9.62□□□□□ -0.87
PABPC1-207ENST00000518716 EID1Q9Y6B2 187 aa9.62□□□□□ -0.87
PABPC1-207ENST00000518716 PRDM15P57071 1507 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms