RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 TMEM132EQ6IEE7 984 aa18.77■□□□□ 0.6
PCM1-204ENST00000517730 GLI2P10070 1586 aa18.77■□□□□ 0.59
PCM1-204ENST00000517730 R3HCC1Q9Y3T6 440 aaKnown RBP18.76■□□□□ 0.59
PCM1-204ENST00000517730 NCLP19338 710 aaKnown RBP18.75■□□□□ 0.59
PCM1-204ENST00000517730 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
PCM1-204ENST00000517730 RBSNQ9H1K0 784 aa18.75■□□□□ 0.59
PCM1-204ENST00000517730 ARHGEF28Q8N1W1 1705 aaKnown RBP18.75■□□□□ 0.59
PCM1-204ENST00000517730 ZKSCAN5Q9Y2L8 839 aa18.74■□□□□ 0.59
PCM1-204ENST00000517730 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
PCM1-204ENST00000517730 A0A1W2PP64 1363 aa18.74■□□□□ 0.59
PCM1-204ENST00000517730 MRPL50Q8N5N7 158 aaKnown RBP18.74■□□□□ 0.59
PCM1-204ENST00000517730 FCHSD2O94868 740 aa18.73■□□□□ 0.59
PCM1-204ENST00000517730 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
PCM1-204ENST00000517730 ABCC4O15439 1325 aa18.73■□□□□ 0.59
PCM1-204ENST00000517730 SIRT2Q8IXJ6 389 aa18.72■□□□□ 0.59
PCM1-204ENST00000517730 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.72■□□□□ 0.59
PCM1-204ENST00000517730 DYNC1I1O14576 645 aa18.72■□□□□ 0.59
PCM1-204ENST00000517730 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
PCM1-204ENST00000517730 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
PCM1-204ENST00000517730 RBM10P98175 930 aaKnown RBP18.71■□□□□ 0.59
PCM1-204ENST00000517730 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.59
PCM1-204ENST00000517730 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.59
PCM1-204ENST00000517730 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
PCM1-204ENST00000517730 VAMP4O75379 141 aa18.71■□□□□ 0.59
PCM1-204ENST00000517730 GSPT1P15170 499 aaKnown RBP18.71■□□□□ 0.59
PCM1-204ENST00000517730 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
PCM1-204ENST00000517730 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
PCM1-204ENST00000517730 KIF24Q5T7B8 1368 aa18.71■□□□□ 0.59
PCM1-204ENST00000517730 UQCRHLA0A096LP55 91 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 ST18O60284 1047 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 UQCRHP07919 91 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 INTS3Q68E01 1043 aaKnown RBP18.7■□□□□ 0.58
PCM1-204ENST00000517730 PLEKHM2Q8IWE5 1019 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 FAM13BQ9NYF5 915 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 ZFYVE9O95405 1425 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 LRSAM1Q6UWE0 723 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 TERF2IPQ9NYB0 399 aa18.7■□□□□ 0.58
PCM1-204ENST00000517730 TTC22Q5TAA0 569 aa18.69■□□□□ 0.58
PCM1-204ENST00000517730 NPATQ14207 1427 aa18.69■□□□□ 0.58
PCM1-204ENST00000517730 FYB1O15117 783 aa18.68■□□□□ 0.58
PCM1-204ENST00000517730 XPCQ01831 940 aaPredicted RBP18.68■□□□□ 0.58
PCM1-204ENST00000517730 PRPF40AO75400 957 aaKnown RBP18.68■□□□□ 0.58
PCM1-204ENST00000517730 CASC1Q6TDU7 716 aa18.68■□□□□ 0.58
PCM1-204ENST00000517730 API5Q9BZZ5 524 aaKnown RBP18.68■□□□□ 0.58
PCM1-204ENST00000517730 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
PCM1-204ENST00000517730 FAM135BQ49AJ0 1406 aa18.68■□□□□ 0.58
PCM1-204ENST00000517730 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
PCM1-204ENST00000517730 SASS6Q6UVJ0 657 aa18.67■□□□□ 0.58
PCM1-204ENST00000517730 GPT2Q8TD30 523 aa18.67■□□□□ 0.58
PCM1-204ENST00000517730 DCTPP1Q9H773 170 aa18.67■□□□□ 0.58
PCM1-204ENST00000517730 LRRC7Q96NW7 1537 aa18.67■□□□□ 0.58
PCM1-204ENST00000517730 GNAI1P63096 354 aa18.67■□□□□ 0.58
PCM1-204ENST00000517730 AK9Q5TCS8 1911 aa18.67■□□□□ 0.58
PCM1-204ENST00000517730 MBD3O95983 291 aa18.66■□□□□ 0.58
PCM1-204ENST00000517730 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
PCM1-204ENST00000517730 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
PCM1-204ENST00000517730 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
PCM1-204ENST00000517730 PKP1Q13835 747 aa18.65■□□□□ 0.58
PCM1-204ENST00000517730 YEATS2Q9ULM3 1422 aa18.65■□□□□ 0.58
PCM1-204ENST00000517730 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
PCM1-204ENST00000517730 SMAP1Q8IYB5 467 aaPredicted RBP18.64■□□□□ 0.57
PCM1-204ENST00000517730 PRDM4Q9UKN5 801 aa18.64■□□□□ 0.57
PCM1-204ENST00000517730 CAMSAP1Q5T5Y3 1602 aa18.64■□□□□ 0.57
PCM1-204ENST00000517730 PRKAR2BP31323 418 aa18.64■□□□□ 0.57
PCM1-204ENST00000517730 REC8O95072 547 aa18.63■□□□□ 0.57
PCM1-204ENST00000517730 RBM27Q9P2N5 1060 aaKnown RBP18.63■□□□□ 0.57
PCM1-204ENST00000517730 ASXL2Q76L83 1435 aa18.63■□□□□ 0.57
PCM1-204ENST00000517730 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
PCM1-204ENST00000517730 ZDHHC9Q9Y397 364 aa18.62■□□□□ 0.57
PCM1-204ENST00000517730 SYCE3A1L190 88 aa18.61■□□□□ 0.57
PCM1-204ENST00000517730 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
PCM1-204ENST00000517730 ZGPATQ8N5A5 531 aaKnown RBP18.61■□□□□ 0.57
PCM1-204ENST00000517730 TSPYL6Q8N831 410 aa18.61■□□□□ 0.57
PCM1-204ENST00000517730 CD163L1Q9NR16 1453 aa18.61■□□□□ 0.57
PCM1-204ENST00000517730 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
PCM1-204ENST00000517730 HDGFL2Q7Z4V5 671 aaPredicted RBP18.6■□□□□ 0.57
PCM1-204ENST00000517730 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
PCM1-204ENST00000517730 TWISTNBQ3B726 338 aaPredicted RBP18.6■□□□□ 0.57
PCM1-204ENST00000517730 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
PCM1-204ENST00000517730 SYAP1Q96A49 352 aaPredicted RBP18.59■□□□□ 0.57
PCM1-204ENST00000517730 FRMPD1Q5SYB0 1578 aa18.59■□□□□ 0.57
PCM1-204ENST00000517730 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
PCM1-204ENST00000517730 ANKRD44Q8N8A2 993 aa18.59■□□□□ 0.57
PCM1-204ENST00000517730 MBIPQ9NS73 344 aa18.59■□□□□ 0.57
PCM1-204ENST00000517730 HECW2Q9P2P5 1572 aa18.59■□□□□ 0.57
PCM1-204ENST00000517730 SDSP20132 328 aa18.58■□□□□ 0.57
PCM1-204ENST00000517730 MCM2P49736 904 aa18.58■□□□□ 0.57
PCM1-204ENST00000517730 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.57
PCM1-204ENST00000517730 KNDC1Q76NI1 1749 aa18.58■□□□□ 0.56
PCM1-204ENST00000517730 LMOD3Q0VAK6 560 aa18.58■□□□□ 0.56
PCM1-204ENST00000517730 KIF20BQ96Q89 1820 aa18.57■□□□□ 0.56
PCM1-204ENST00000517730 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
PCM1-204ENST00000517730 TSPY26PQ9H489 355 aa18.57■□□□□ 0.56
PCM1-204ENST00000517730 ERC2O15083 957 aa18.57■□□□□ 0.56
PCM1-204ENST00000517730 PTMAP06454 111 aaKnown RBP18.56■□□□□ 0.56
PCM1-204ENST00000517730 PHF14O94880 888 aa18.55■□□□□ 0.56
PCM1-204ENST00000517730 C16orf71Q8IYS4 520 aaPredicted RBP18.55■□□□□ 0.56
PCM1-204ENST00000517730 PHACTR3Q96KR7 559 aa18.55■□□□□ 0.56
PCM1-204ENST00000517730 ABCC3O15438 1527 aa18.55■□□□□ 0.56
PCM1-204ENST00000517730 THUMPD2Q9BTF0 503 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms