RNA–Protein interactions for RNA: ENST00000517672.5

FAM49B-203, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-203ENST00000517672 SKIP12755 728 aa8.65□□□□□ -1.02
FAM49B-203ENST00000517672 BAP1Q92560 729 aa8.65□□□□□ -1.02
FAM49B-203ENST00000517672 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
FAM49B-203ENST00000517672 ATP5J2-PTCD1G3V325 749 aa8.64□□□□□ -1.03
FAM49B-203ENST00000517672 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
FAM49B-203ENST00000517672 SND1Q7KZF4 910 aaKnown RBP eCLIP8.64□□□□□ -1.03
FAM49B-203ENST00000517672 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
FAM49B-203ENST00000517672 MTMR7Q9Y216 660 aa8.64□□□□□ -1.03
FAM49B-203ENST00000517672 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
FAM49B-203ENST00000517672 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
FAM49B-203ENST00000517672 IVNS1ABPQ9Y6Y0 642 aa8.63□□□□□ -1.03
FAM49B-203ENST00000517672 MAGEB6P1A0A0J9YX57 407 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 GGCXP38435 758 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 ERFEQ4G0M1 354 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 C1QTNF2Q9BXJ5 285 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 CARD14Q9BXL6 1004 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 ZMIZ1Q9ULJ6 1067 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 NOVA2Q9UNW9 492 aaKnown RBP8.62□□□□□ -1.03
FAM49B-203ENST00000517672 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
FAM49B-203ENST00000517672 AGERQ15109 404 aa8.61□□□□□ -1.03
FAM49B-203ENST00000517672 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
FAM49B-203ENST00000517672 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
FAM49B-203ENST00000517672 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
FAM49B-203ENST00000517672 LARP1Q6PKG0 1096 aaKnown RBP8.61□□□□□ -1.03
FAM49B-203ENST00000517672 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
FAM49B-203ENST00000517672 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
FAM49B-203ENST00000517672 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
FAM49B-203ENST00000517672 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
FAM49B-203ENST00000517672 CDCA7Q9BWT1 371 aaPredicted RBP8.61□□□□□ -1.03
FAM49B-203ENST00000517672 MKRN1Q9UHC7 482 aaKnown RBP8.61□□□□□ -1.03
FAM49B-203ENST00000517672 CDV3Q9UKY7 258 aaKnown RBP8.61□□□□□ -1.03
FAM49B-203ENST00000517672 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
FAM49B-203ENST00000517672 RNF223E7ERA6 249 aa8.6□□□□□ -1.03
FAM49B-203ENST00000517672 ZBTB24O43167 697 aaPredicted RBP8.6□□□□□ -1.03
FAM49B-203ENST00000517672 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
FAM49B-203ENST00000517672 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
FAM49B-203ENST00000517672 SLC10A4Q96EP9 437 aa8.6□□□□□ -1.03
FAM49B-203ENST00000517672 SH3BP2P78314 561 aa8.59□□□□□ -1.03
FAM49B-203ENST00000517672 PTK7Q13308 1070 aa8.59□□□□□ -1.03
FAM49B-203ENST00000517672 NCOA4Q13772 614 aa8.59□□□□□ -1.03
FAM49B-203ENST00000517672 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
FAM49B-203ENST00000517672 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
FAM49B-203ENST00000517672 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
FAM49B-203ENST00000517672 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
FAM49B-203ENST00000517672 USP17L15C9J2P7 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L10C9JJH3 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L13C9JLJ4 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L12C9JPN9 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L11C9JVI0 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L21D6R901 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L18D6R9N7 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L22D6RA61 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L17D6RBQ6 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L19D6RCP7 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L20D6RJB6 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 PPEF1O14829 653 aaPredicted RBP8.58□□□□□ -1.04
FAM49B-203ENST00000517672 WNT7BP56706 349 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 USP17L24Q0WX57 530 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 TRIM32Q13049 653 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 EML3Q32P44 896 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 TXNDC2Q86VQ3 553 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 TRIM50Q86XT4 487 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 SEPT12Q8IYM1 358 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 DEPDC4Q8N2C3 294 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 FAM200AQ8TCP9 573 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 STK32AQ8WU08 396 aa8.58□□□□□ -1.04
FAM49B-203ENST00000517672 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
FAM49B-203ENST00000517672 RASA1P20936 1047 aa8.57□□□□□ -1.04
FAM49B-203ENST00000517672 ARID4AP29374 1257 aaPredicted RBP8.57□□□□□ -1.04
FAM49B-203ENST00000517672 ATP1A2P50993 1020 aa8.57□□□□□ -1.04
FAM49B-203ENST00000517672 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
FAM49B-203ENST00000517672 ESPNB1AK53 854 aa8.56□□□□□ -1.04
FAM49B-203ENST00000517672 GIGYF1O75420 1035 aaPredicted RBP8.56□□□□□ -1.04
FAM49B-203ENST00000517672 VARSP26640 1264 aaKnown RBP8.56□□□□□ -1.04
FAM49B-203ENST00000517672 SSFA2P28290 1259 aa8.56□□□□□ -1.04
FAM49B-203ENST00000517672 RPIAP49247 311 aa8.56□□□□□ -1.04
FAM49B-203ENST00000517672 CRTC2Q53ET0 693 aaPredicted RBP8.56□□□□□ -1.04
FAM49B-203ENST00000517672 ANKMY2Q8IV38 441 aa8.56□□□□□ -1.04
FAM49B-203ENST00000517672 PLA2G2CQ5R387 149 aa8.55□□□□□ -1.04
FAM49B-203ENST00000517672 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
FAM49B-203ENST00000517672 LARGE2Q8N3Y3 721 aa8.55□□□□□ -1.04
FAM49B-203ENST00000517672 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
FAM49B-203ENST00000517672 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
FAM49B-203ENST00000517672 DOLKQ9UPQ8 538 aa8.55□□□□□ -1.04
FAM49B-203ENST00000517672 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
FAM49B-203ENST00000517672 FAM69CQ0P6D2 419 aa8.54□□□□□ -1.04
FAM49B-203ENST00000517672 PHLDB3Q6NSJ2 640 aa8.54□□□□□ -1.04
FAM49B-203ENST00000517672 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
FAM49B-203ENST00000517672 ERCC3P19447 782 aa8.53□□□□□ -1.04
FAM49B-203ENST00000517672 SKOR1P84550 965 aa8.53□□□□□ -1.04
FAM49B-203ENST00000517672 TSGA10IPQ3SY00 556 aa8.53□□□□□ -1.04
FAM49B-203ENST00000517672 OGFOD1Q8N543 542 aa8.53□□□□□ -1.04
FAM49B-203ENST00000517672 C1orf216Q8TAB5 229 aa8.53□□□□□ -1.04
FAM49B-203ENST00000517672 SIRT1Q96EB6 747 aa8.53□□□□□ -1.04
FAM49B-203ENST00000517672 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
FAM49B-203ENST00000517672 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-203ENST00000517672 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-203ENST00000517672 CD2BP2O95400 341 aaKnown RBP8.51□□□□□ -1.05
FAM49B-203ENST00000517672 SIX5Q8N196 739 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms