RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 CCDC192P0DO97 292 aa20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 NEFHP12036 1026 aa20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 DDX54Q8TDD1 881 aaKnown RBP20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 PIBF1Q8WXW3 757 aa20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 ZNHIT6Q9NWK9 470 aaKnown RBP20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 FAM193AP78312 1265 aa20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 ANKRD62A6NC57 917 aa20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 CT47B1P0C2W7 299 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 AACSQ86V21 672 aa20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 GNL3LQ9NVN8 582 aaKnown RBP20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
ARHGEF28-212ENST00000513042 CCDC181Q5TID7 509 aa20.55■□□□□ 0.88
ARHGEF28-212ENST00000513042 CDK19Q9BWU1 502 aa20.55■□□□□ 0.88
ARHGEF28-212ENST00000513042 AEBP1Q8IUX7 1158 aa20.55■□□□□ 0.88
ARHGEF28-212ENST00000513042 PDCL3Q9H2J4 239 aa20.55■□□□□ 0.88
ARHGEF28-212ENST00000513042 TATP17735 454 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF28-212ENST00000513042 CWC27Q6UX04 472 aaKnown RBP20.55■□□□□ 0.88
ARHGEF28-212ENST00000513042 SEPT11Q9NVA2 429 aaKnown RBP20.55■□□□□ 0.88
ARHGEF28-212ENST00000513042 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
ARHGEF28-212ENST00000513042 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
ARHGEF28-212ENST00000513042 NCOA2Q15596 1464 aa20.54■□□□□ 0.88
ARHGEF28-212ENST00000513042 CENPHQ9H3R5 247 aa20.54■□□□□ 0.88
ARHGEF28-212ENST00000513042 SLC12A5Q9H2X9 1139 aa20.54■□□□□ 0.88
ARHGEF28-212ENST00000513042 RBM5P52756 815 aaKnown RBP eCLIP20.54■□□□□ 0.88
ARHGEF28-212ENST00000513042 PDRG1Q9NUG6 133 aa20.53■□□□□ 0.88
ARHGEF28-212ENST00000513042 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
ARHGEF28-212ENST00000513042 MTERF4Q7Z6M4 381 aaKnown RBP20.53■□□□□ 0.88
ARHGEF28-212ENST00000513042 TRIM22Q8IYM9 498 aa20.53■□□□□ 0.88
ARHGEF28-212ENST00000513042 GRPEL1Q9HAV7 217 aa20.53■□□□□ 0.88
ARHGEF28-212ENST00000513042 PIP4K2AP48426 406 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF28-212ENST00000513042 KIF21BO75037 1637 aa20.52■□□□□ 0.88
ARHGEF28-212ENST00000513042 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF28-212ENST00000513042 CHD1LQ86WJ1 897 aa20.52■□□□□ 0.88
ARHGEF28-212ENST00000513042 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
ARHGEF28-212ENST00000513042 JMYQ8N9B5 988 aa20.52■□□□□ 0.88
ARHGEF28-212ENST00000513042 WDR33Q9C0J8 1336 aaKnown RBP20.52■□□□□ 0.88
ARHGEF28-212ENST00000513042 ANKRD1Q15327 319 aa20.52■□□□□ 0.87
ARHGEF28-212ENST00000513042 JAKMIP1Q96N16 626 aaKnown RBP20.52■□□□□ 0.87
ARHGEF28-212ENST00000513042 ERLIN2O94905 339 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 ENOX2Q16206 610 aaKnown RBP20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 SPATA32Q96LK8 384 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 SRCIN1Q9C0H9 1055 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 DACH1Q9UI36 760 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 CCDC66A2RUB6 948 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 GOLGA6L10A6NI86 522 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 NUTM2BA6NNL0 878 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 NUTM2EB1AL46 878 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 NUTM2AQ8IVF1 878 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 AFAP1Q8N556 730 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 UQCRHLA0A096LP55 91 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 UQCRHP07919 91 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 PDE3AQ14432 1141 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 NACAP1Q9BZK3 213 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
ARHGEF28-212ENST00000513042 HSP90AB3PQ58FF7 597 aa20.5■□□□□ 0.87
ARHGEF28-212ENST00000513042 SSBP05455 408 aaKnown RBP eCLIP20.5■□□□□ 0.87
ARHGEF28-212ENST00000513042 CCDC85AQ96PX6 553 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF28-212ENST00000513042 STIM1Q13586 685 aa20.5■□□□□ 0.87
ARHGEF28-212ENST00000513042 KRT85P78386 507 aa20.5■□□□□ 0.87
ARHGEF28-212ENST00000513042 PROSER2Q86WR7 435 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF28-212ENST00000513042 RRS1Q15050 365 aaKnown RBP20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 SEPT7Q16181 437 aaKnown RBP20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 ZNF530Q6P9A1 599 aaPredicted RBP20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 MVPQ14764 893 aaKnown RBP20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 TOM1L2Q6ZVM7 507 aa20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 CCDC112Q8NEF3 446 aa20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 NUTM1Q86Y26 1132 aa20.49■□□□□ 0.87
ARHGEF28-212ENST00000513042 CCDC57Q2TAC2 916 aa20.48■□□□□ 0.87
ARHGEF28-212ENST00000513042 TAX1BP1Q86VP1 789 aa20.48■□□□□ 0.87
ARHGEF28-212ENST00000513042 CAMK4Q16566 473 aa20.48■□□□□ 0.87
ARHGEF28-212ENST00000513042 IGF1RP08069 1367 aa20.47■□□□□ 0.87
ARHGEF28-212ENST00000513042 SRGAP3O43295 1099 aa20.47■□□□□ 0.87
ARHGEF28-212ENST00000513042 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
ARHGEF28-212ENST00000513042 TDO2P48775 406 aa20.47■□□□□ 0.87
ARHGEF28-212ENST00000513042 ATF7IPQ6VMQ6 1270 aa20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 DDX11Q96FC9 970 aa20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 BACH2Q9BYV9 841 aa20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 MATR3P43243 847 aaKnown RBP eCLIP20.46■□□□□ 0.872e-6■■■■□ 20.2
ARHGEF28-212ENST00000513042 HMGN5P82970 282 aaKnown RBP20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 BICDL1Q6ZP65 573 aa20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 BLOC1S2Q6QNY1 142 aa20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 NOL7Q9UMY1 257 aaKnown RBP20.46■□□□□ 0.87
ARHGEF28-212ENST00000513042 CBFA2T2O43439 604 aa20.45■□□□□ 0.86
ARHGEF28-212ENST00000513042 AQRO60306 1485 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■■□□□ 14.2
ARHGEF28-212ENST00000513042 MIS18AQ9NYP9 233 aa20.45■□□□□ 0.86
ARHGEF28-212ENST00000513042 RAI14Q9P0K7 980 aa20.44■□□□□ 0.86
ARHGEF28-212ENST00000513042 CASTP20810 708 aaKnown RBP20.44■□□□□ 0.86
ARHGEF28-212ENST00000513042 NUP62CLQ9H1M0 184 aa20.44■□□□□ 0.86
ARHGEF28-212ENST00000513042 IBSPP21815 317 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF28-212ENST00000513042 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF28-212ENST00000513042 KIAA0754O94854 1291 aa20.43■□□□□ 0.86
ARHGEF28-212ENST00000513042 SPG7Q9UQ90 795 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms