RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
RPS3A-206ENST00000507485 MMRN1Q13201 1228 aa13.3□□□□□ -0.28
RPS3A-206ENST00000507485 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
RPS3A-206ENST00000507485 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
RPS3A-206ENST00000507485 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
RPS3A-206ENST00000507485 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
RPS3A-206ENST00000507485 POGKQ9P215 609 aa13.29□□□□□ -0.28
RPS3A-206ENST00000507485 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
RPS3A-206ENST00000507485 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
RPS3A-206ENST00000507485 PSME1Q06323 249 aa13.29□□□□□ -0.28
RPS3A-206ENST00000507485 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
RPS3A-206ENST00000507485 VPS72Q15906 364 aa13.29□□□□□ -0.28
RPS3A-206ENST00000507485 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
RPS3A-206ENST00000507485 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
RPS3A-206ENST00000507485 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
RPS3A-206ENST00000507485 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
RPS3A-206ENST00000507485 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
RPS3A-206ENST00000507485 SRCAPQ6ZRS2 3230 aa13.27□□□□□ -0.28
RPS3A-206ENST00000507485 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.28
RPS3A-206ENST00000507485 ARHGEF10O15013 1369 aa13.27□□□□□ -0.28
RPS3A-206ENST00000507485 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
RPS3A-206ENST00000507485 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
RPS3A-206ENST00000507485 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
RPS3A-206ENST00000507485 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
RPS3A-206ENST00000507485 DEFB132Q7Z7B7 95 aa13.26□□□□□ -0.29
RPS3A-206ENST00000507485 PDCD7Q8N8D1 485 aaKnown RBP13.26□□□□□ -0.29
RPS3A-206ENST00000507485 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
RPS3A-206ENST00000507485 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
RPS3A-206ENST00000507485 VASPP50552 380 aaPredicted RBP13.24□□□□□ -0.29
RPS3A-206ENST00000507485 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
RPS3A-206ENST00000507485 ATP7BP35670 1465 aa13.24□□□□□ -0.29
RPS3A-206ENST00000507485 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
RPS3A-206ENST00000507485 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
RPS3A-206ENST00000507485 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
RPS3A-206ENST00000507485 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
RPS3A-206ENST00000507485 BTG4Q9NY30 223 aa13.22□□□□□ -0.29
RPS3A-206ENST00000507485 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.3
RPS3A-206ENST00000507485 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
RPS3A-206ENST00000507485 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
RPS3A-206ENST00000507485 FAM182BQ5T319 152 aa13.2□□□□□ -0.3
RPS3A-206ENST00000507485 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
RPS3A-206ENST00000507485 THSD7AQ9UPZ6 1657 aa13.2□□□□□ -0.3
RPS3A-206ENST00000507485 PHRF1Q9P1Y6 1649 aaKnown RBP13.2□□□□□ -0.3
RPS3A-206ENST00000507485 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
RPS3A-206ENST00000507485 NUDT16Q96DE0 195 aaKnown RBP13.19□□□□□ -0.3
RPS3A-206ENST00000507485 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
RPS3A-206ENST00000507485 HRCP23327 699 aa13.18□□□□□ -0.3
RPS3A-206ENST00000507485 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
RPS3A-206ENST00000507485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.36e-12■□□□□ 9.5
RPS3A-206ENST00000507485 SPATA31A5Q5VU36 1347 aa13.18□□□□□ -0.3
RPS3A-206ENST00000507485 SPATA31A7Q8IWB4 1347 aa13.18□□□□□ -0.3
RPS3A-206ENST00000507485 PSEN1P49768 467 aa13.18□□□□□ -0.3
RPS3A-206ENST00000507485 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
RPS3A-206ENST00000507485 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
RPS3A-206ENST00000507485 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
RPS3A-206ENST00000507485 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
RPS3A-206ENST00000507485 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
RPS3A-206ENST00000507485 EMP3P54852 163 aa13.16□□□□□ -0.3
RPS3A-206ENST00000507485 CHRNA2Q15822 529 aa13.16□□□□□ -0.3
RPS3A-206ENST00000507485 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
RPS3A-206ENST00000507485 TNS1Q9HBL0 1735 aaKnown RBP13.16□□□□□ -0.3
RPS3A-206ENST00000507485 POLR3AO14802 1390 aaPredicted RBP13.16□□□□□ -0.3
RPS3A-206ENST00000507485 A0A0G2JS52 829 aa13.15□□□□□ -0.3
RPS3A-206ENST00000507485 MYT1Q01538 1121 aa13.15□□□□□ -0.3
RPS3A-206ENST00000507485 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.3
RPS3A-206ENST00000507485 ACEP12821 1306 aa13.15□□□□□ -0.31
RPS3A-206ENST00000507485 NRKQ7Z2Y5 1582 aa13.14□□□□□ -0.31
RPS3A-206ENST00000507485 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
RPS3A-206ENST00000507485 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
RPS3A-206ENST00000507485 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
RPS3A-206ENST00000507485 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
RPS3A-206ENST00000507485 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
RPS3A-206ENST00000507485 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
RPS3A-206ENST00000507485 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
RPS3A-206ENST00000507485 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
RPS3A-206ENST00000507485 LRP5O75197 1615 aa13.12□□□□□ -0.31
RPS3A-206ENST00000507485 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
RPS3A-206ENST00000507485 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
RPS3A-206ENST00000507485 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
RPS3A-206ENST00000507485 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
RPS3A-206ENST00000507485 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
RPS3A-206ENST00000507485 USP19O94966 1318 aa13.1□□□□□ -0.31
RPS3A-206ENST00000507485 BAG6P46379 1132 aa13.09□□□□□ -0.31
RPS3A-206ENST00000507485 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
RPS3A-206ENST00000507485 QRICH2Q9H0J4 1663 aa13.09□□□□□ -0.31
RPS3A-206ENST00000507485 G3V3G9 751 aa13.08□□□□□ -0.31
RPS3A-206ENST00000507485 CABP2Q9NPB3 220 aa13.08□□□□□ -0.31
RPS3A-206ENST00000507485 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.31
RPS3A-206ENST00000507485 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
RPS3A-206ENST00000507485 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
RPS3A-206ENST00000507485 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
RPS3A-206ENST00000507485 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
RPS3A-206ENST00000507485 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
RPS3A-206ENST00000507485 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
RPS3A-206ENST00000507485 CPDO75976 1380 aa13.06□□□□□ -0.32
RPS3A-206ENST00000507485 TRIM37O94972 964 aa13.06□□□□□ -0.32
RPS3A-206ENST00000507485 CAMKK2Q96RR4 588 aa13.06□□□□□ -0.32
RPS3A-206ENST00000507485 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
RPS3A-206ENST00000507485 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
RPS3A-206ENST00000507485 R3HDM1Q15032 1099 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms