RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
AP001960.1-201ENST00000506494 BCAMP50895 628 aa10.28□□□□□ -0.76
AP001960.1-201ENST00000506494 LSM11P83369 360 aaKnown RBP eCLIP10.28□□□□□ -0.76
AP001960.1-201ENST00000506494 PTK7Q13308 1070 aa10.28□□□□□ -0.76
AP001960.1-201ENST00000506494 MAP7D1Q3KQU3 841 aa10.28□□□□□ -0.76
AP001960.1-201ENST00000506494 TXNDC2Q86VQ3 553 aa10.28□□□□□ -0.76
AP001960.1-201ENST00000506494 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
AP001960.1-201ENST00000506494 ZBTB33Q86T24 672 aa10.27□□□□□ -0.77
AP001960.1-201ENST00000506494 TRIM50Q86XT4 487 aa10.27□□□□□ -0.77
AP001960.1-201ENST00000506494 ANKMY2Q8IV38 441 aa10.27□□□□□ -0.77
AP001960.1-201ENST00000506494 SPSB2Q99619 263 aa10.27□□□□□ -0.77
AP001960.1-201ENST00000506494 ARHGAP9Q9BRR9 750 aa10.27□□□□□ -0.77
AP001960.1-201ENST00000506494 SSFA2P28290 1259 aa10.26□□□□□ -0.77
AP001960.1-201ENST00000506494 ADAM32Q8TC27 787 aa10.26□□□□□ -0.77
AP001960.1-201ENST00000506494 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
AP001960.1-201ENST00000506494 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
AP001960.1-201ENST00000506494 OGFOD1Q8N543 542 aa10.25□□□□□ -0.77
AP001960.1-201ENST00000506494 WNT2BQ93097 391 aa10.25□□□□□ -0.77
AP001960.1-201ENST00000506494 HRO43593 1189 aa10.24□□□□□ -0.77
AP001960.1-201ENST00000506494 ATP2B4P23634 1241 aa10.24□□□□□ -0.77
AP001960.1-201ENST00000506494 PHLDB3Q6NSJ2 640 aa10.24□□□□□ -0.77
AP001960.1-201ENST00000506494 DZIP3Q86Y13 1208 aaKnown RBP10.24□□□□□ -0.77
AP001960.1-201ENST00000506494 PHTF2Q8N3S3 785 aa10.24□□□□□ -0.77
AP001960.1-201ENST00000506494 NOD1Q9Y239 953 aa10.24□□□□□ -0.77
AP001960.1-201ENST00000506494 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
AP001960.1-201ENST00000506494 MMP16P51512 607 aa10.23□□□□□ -0.77
AP001960.1-201ENST00000506494 SWI5Q1ZZU3 235 aa10.23□□□□□ -0.77
AP001960.1-201ENST00000506494 ZNF594Q96JF6 807 aaPredicted RBP10.23□□□□□ -0.77
AP001960.1-201ENST00000506494 DNAAF2Q9NVR5 837 aaKnown RBP10.23□□□□□ -0.77
AP001960.1-201ENST00000506494 DPYDQ12882 1025 aa10.22□□□□□ -0.77
AP001960.1-201ENST00000506494 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
AP001960.1-201ENST00000506494 OCSTAMPQ9BR26 566 aa10.22□□□□□ -0.77
AP001960.1-201ENST00000506494 ERCC3P19447 782 aa10.21□□□□□ -0.77
AP001960.1-201ENST00000506494 COPS2P61201 443 aa10.21□□□□□ -0.77
AP001960.1-201ENST00000506494 FAM69CQ0P6D2 419 aa10.21□□□□□ -0.77
AP001960.1-201ENST00000506494 CCDC24Q8N4L8 307 aa10.21□□□□□ -0.77
AP001960.1-201ENST00000506494 PRDM9Q9NQV7 894 aa10.21□□□□□ -0.77
AP001960.1-201ENST00000506494 DOLKQ9UPQ8 538 aa10.21□□□□□ -0.77
AP001960.1-201ENST00000506494 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
AP001960.1-201ENST00000506494 UNC93B1Q9H1C4 597 aa10.2□□□□□ -0.78
AP001960.1-201ENST00000506494 CHIC2Q9UKJ5 165 aa10.2□□□□□ -0.78
AP001960.1-201ENST00000506494 TRAF7Q6Q0C0 670 aa10.19□□□□□ -0.78
AP001960.1-201ENST00000506494 LARGE2Q8N3Y3 721 aa10.19□□□□□ -0.78
AP001960.1-201ENST00000506494 CARD14Q9BXL6 1004 aa10.19□□□□□ -0.78
AP001960.1-201ENST00000506494 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
AP001960.1-201ENST00000506494 SOWAHDA6NJG2 315 aa10.18□□□□□ -0.78
AP001960.1-201ENST00000506494 CLDN10P78369 228 aa10.18□□□□□ -0.78
AP001960.1-201ENST00000506494 OXLD1Q5BKU9 147 aa10.18□□□□□ -0.78
AP001960.1-201ENST00000506494 WBP1LQ9NX94 342 aa10.18□□□□□ -0.78
AP001960.1-201ENST00000506494 SLAIN2Q9P270 581 aa10.18□□□□□ -0.78
AP001960.1-201ENST00000506494 BIN2Q9UBW5 565 aaPredicted RBP10.18□□□□□ -0.78
AP001960.1-201ENST00000506494 SERPINB4P48594 390 aa10.17□□□□□ -0.78
AP001960.1-201ENST00000506494 AGERQ15109 404 aa10.17□□□□□ -0.78
AP001960.1-201ENST00000506494 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
AP001960.1-201ENST00000506494 SH3BP5LQ7L8J4 393 aa10.17□□□□□ -0.78
AP001960.1-201ENST00000506494 ADH1BP00325 375 aa10.16□□□□□ -0.78
AP001960.1-201ENST00000506494 PSME1Q06323 249 aa10.16□□□□□ -0.78
AP001960.1-201ENST00000506494 RBM47A0AV96 593 aaKnown RBP10.15□□□□□ -0.78
AP001960.1-201ENST00000506494 SEC13P55735 322 aa10.15□□□□□ -0.78
AP001960.1-201ENST00000506494 GTF2IP78347 998 aa10.15□□□□□ -0.78
AP001960.1-201ENST00000506494 SIRT1Q96EB6 747 aa10.15□□□□□ -0.78
AP001960.1-201ENST00000506494 PRMT3O60678 531 aa10.14□□□□□ -0.79
AP001960.1-201ENST00000506494 MARSP56192 900 aaKnown RBP10.14□□□□□ -0.79
AP001960.1-201ENST00000506494 TSGA10IPQ3SY00 556 aa10.14□□□□□ -0.79
AP001960.1-201ENST00000506494 BPHLQ86WA6 291 aaPredicted RBP10.14□□□□□ -0.79
AP001960.1-201ENST00000506494 SIX5Q8N196 739 aa10.14□□□□□ -0.79
AP001960.1-201ENST00000506494 C1orf216Q8TAB5 229 aa10.14□□□□□ -0.79
AP001960.1-201ENST00000506494 CCDC85AQ96PX6 553 aaPredicted RBP10.14□□□□□ -0.79
AP001960.1-201ENST00000506494 TLL1O43897 1013 aa10.13□□□□□ -0.79
AP001960.1-201ENST00000506494 SLC10A4Q96EP9 437 aa10.13□□□□□ -0.79
AP001960.1-201ENST00000506494 ZPR1O75312 459 aa10.12□□□□□ -0.79
AP001960.1-201ENST00000506494 GIGYF1O75420 1035 aaPredicted RBP10.12□□□□□ -0.79
AP001960.1-201ENST00000506494 CCDC102BQ68D86 513 aa10.12□□□□□ -0.79
AP001960.1-201ENST00000506494 PTCRAQ6ISU1 281 aaPredicted RBP10.12□□□□□ -0.79
AP001960.1-201ENST00000506494 TPCN2Q8NHX9 752 aa10.12□□□□□ -0.79
AP001960.1-201ENST00000506494 ABL1P00519 1130 aa10.11□□□□□ -0.79
AP001960.1-201ENST00000506494 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
AP001960.1-201ENST00000506494 DNAJC14Q6Y2X3 702 aaPredicted RBP10.11□□□□□ -0.79
AP001960.1-201ENST00000506494 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
AP001960.1-201ENST00000506494 SH3RF1Q7Z6J0 888 aa10.11□□□□□ -0.79
AP001960.1-201ENST00000506494 SLC6A16Q9GZN6 736 aa10.11□□□□□ -0.79
AP001960.1-201ENST00000506494 KIAA1024Q9UPX6 916 aa10.11□□□□□ -0.79
AP001960.1-201ENST00000506494 ZBTB7BO15156 539 aaPredicted RBP10.1□□□□□ -0.79
AP001960.1-201ENST00000506494 USP4Q13107 963 aa10.1□□□□□ -0.79
AP001960.1-201ENST00000506494 ERFEQ4G0M1 354 aa10.1□□□□□ -0.79
AP001960.1-201ENST00000506494 PRIMPOLQ96LW4 560 aa10.1□□□□□ -0.79
AP001960.1-201ENST00000506494 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
AP001960.1-201ENST00000506494 BAP1Q92560 729 aa10.09□□□□□ -0.79
AP001960.1-201ENST00000506494 HINFPQ9BQA5 517 aa10.09□□□□□ -0.79
AP001960.1-201ENST00000506494 BCL2L13Q9BXK5 485 aa10.09□□□□□ -0.79
AP001960.1-201ENST00000506494 UNCXA6NJT0 531 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 SCNN1AP37088 669 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 CCDC125Q86Z20 511 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 EGFL7Q9UHF1 273 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 PCDHB11Q9Y5F2 797 aa10.08□□□□□ -0.8
AP001960.1-201ENST00000506494 DKK1O94907 266 aa10.07□□□□□ -0.8
AP001960.1-201ENST00000506494 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms