RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PRR20BP86481 221 aa11.21□□□□□ -0.61
NIPBL-205ENST00000505998 PRR20AP86496 221 aa11.21□□□□□ -0.61
NIPBL-205ENST00000505998 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.61
NIPBL-205ENST00000505998 KCTD15Q96SI1 283 aaPredicted RBP11.21□□□□□ -0.61
NIPBL-205ENST00000505998 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.61
NIPBL-205ENST00000505998 SLFNL1Q499Z3 407 aa11.19□□□□□ -0.62
NIPBL-205ENST00000505998 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
NIPBL-205ENST00000505998 GIGYF1O75420 1035 aaPredicted RBP11.18□□□□□ -0.62
NIPBL-205ENST00000505998 ADH1CP00326 375 aa11.18□□□□□ -0.62
NIPBL-205ENST00000505998 TOR4AQ9NXH8 423 aa11.18□□□□□ -0.62
NIPBL-205ENST00000505998 WASF2Q9Y6W5 498 aa11.18□□□□□ -0.62
NIPBL-205ENST00000505998 FSHRP23945 695 aa11.17□□□□□ -0.62
NIPBL-205ENST00000505998 GRM5P41594 1212 aa11.17□□□□□ -0.62
NIPBL-205ENST00000505998 RNF20Q5VTR2 975 aa11.17□□□□□ -0.62
NIPBL-205ENST00000505998 ESPNB1AK53 854 aa11.16□□□□□ -0.62
NIPBL-205ENST00000505998 RAB15P59190 212 aa11.16□□□□□ -0.62
NIPBL-205ENST00000505998 NR5A1Q13285 461 aa11.16□□□□□ -0.62
NIPBL-205ENST00000505998 J3QL48 77 aa11.15□□□□□ -0.62
NIPBL-205ENST00000505998 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
NIPBL-205ENST00000505998 RNF135Q8IUD6 432 aa11.15□□□□□ -0.62
NIPBL-205ENST00000505998 SEPT12Q8IYM1 358 aa11.15□□□□□ -0.62
NIPBL-205ENST00000505998 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
NIPBL-205ENST00000505998 CCDC97Q96F63 343 aaPredicted RBP11.14□□□□□ -0.63
NIPBL-205ENST00000505998 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 GFRA3O60609 400 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 DHX9Q08211 1270 aaKnown RBP11.12□□□□□ -0.63
NIPBL-205ENST00000505998 NNTQ13423 1086 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 CCDC116Q8IYX3 515 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 PHTF2Q8N3S3 785 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 UCN2Q96RP3 112 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 SERPINA10Q9UK55 444 aa11.12□□□□□ -0.63
NIPBL-205ENST00000505998 SKIP12755 728 aa11.11□□□□□ -0.63
NIPBL-205ENST00000505998 SMPD1P17405 629 aa11.11□□□□□ -0.63
NIPBL-205ENST00000505998 CCDC82Q8N4S0 544 aa11.11□□□□□ -0.63
NIPBL-205ENST00000505998 NFATC2IPQ8NCF5 419 aa11.1□□□□□ -0.63
NIPBL-205ENST00000505998 ERVH48-1M5A8F1 160 aa11.09□□□□□ -0.63
NIPBL-205ENST00000505998 NR3C2P08235 984 aa11.09□□□□□ -0.63
NIPBL-205ENST00000505998 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
NIPBL-205ENST00000505998 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
NIPBL-205ENST00000505998 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
NIPBL-205ENST00000505998 PPP1R12CQ9BZL4 782 aa11.09□□□□□ -0.63
NIPBL-205ENST00000505998 PCDHB11Q9Y5F2 797 aa11.09□□□□□ -0.63
NIPBL-205ENST00000505998 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
NIPBL-205ENST00000505998 FAM187AA6NFU0 413 aa11.08□□□□□ -0.64
NIPBL-205ENST00000505998 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
NIPBL-205ENST00000505998 ATP9BO43861 1147 aa11.08□□□□□ -0.64
NIPBL-205ENST00000505998 TFIP11Q9UBB9 837 aaKnown RBP11.08□□□□□ -0.64
NIPBL-205ENST00000505998 DOLKQ9UPQ8 538 aa11.08□□□□□ -0.64
NIPBL-205ENST00000505998 EMILIN1Q9Y6C2 1016 aa11.08□□□□□ -0.64
NIPBL-205ENST00000505998 MAP7D1Q3KQU3 841 aa11.07□□□□□ -0.64
NIPBL-205ENST00000505998 PPP1R26Q5T8A7 1209 aaPredicted RBP11.07□□□□□ -0.64
NIPBL-205ENST00000505998 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
NIPBL-205ENST00000505998 CHIC2Q9UKJ5 165 aa11.07□□□□□ -0.64
NIPBL-205ENST00000505998 LAPTM4AQ15012 233 aa11.06□□□□□ -0.64
NIPBL-205ENST00000505998 HPS1Q92902 700 aa11.06□□□□□ -0.64
NIPBL-205ENST00000505998 ARID3AQ99856 593 aa11.06□□□□□ -0.64
NIPBL-205ENST00000505998 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
NIPBL-205ENST00000505998 TMPRSS4Q9NRS4 437 aa11.06□□□□□ -0.64
NIPBL-205ENST00000505998 PGPEP1Q9NXJ5 209 aa11.06□□□□□ -0.64
NIPBL-205ENST00000505998 USP17L5A8MUK1 530 aa11.05□□□□□ -0.64
NIPBL-205ENST00000505998 TSGA10IPQ3SY00 556 aa11.05□□□□□ -0.64
NIPBL-205ENST00000505998 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
NIPBL-205ENST00000505998 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
NIPBL-205ENST00000505998 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
NIPBL-205ENST00000505998 TRAF7Q6Q0C0 670 aa11.04□□□□□ -0.64
NIPBL-205ENST00000505998 MAFBQ9Y5Q3 323 aaPredicted RBP11.04□□□□□ -0.64
NIPBL-205ENST00000505998 LZTS3O60299 673 aaPredicted RBP11.03□□□□□ -0.64
NIPBL-205ENST00000505998 LMOD1P29536 600 aaPredicted RBP11.03□□□□□ -0.64
NIPBL-205ENST00000505998 MYT1Q01538 1121 aa11.03□□□□□ -0.64
NIPBL-205ENST00000505998 ZNF784Q8NCA9 323 aaPredicted RBP11.03□□□□□ -0.64
NIPBL-205ENST00000505998 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
NIPBL-205ENST00000505998 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
NIPBL-205ENST00000505998 USP17L3A6NCW0 530 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 USP17L4A6NCW7 530 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 DGAT1O75907 488 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 ZIC2O95409 532 aaPredicted RBP11.02□□□□□ -0.65
NIPBL-205ENST00000505998 NCOA4Q13772 614 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 EML3Q32P44 896 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 USP17L2Q6R6M4 530 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 USP17L1Q7RTZ2 530 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 PLEKHM2Q8IWE5 1019 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 ITPKCQ96DU7 683 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 SIRT1Q96EB6 747 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 CYLDQ9NQC7 956 aa11.02□□□□□ -0.65
NIPBL-205ENST00000505998 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
NIPBL-205ENST00000505998 RFX1P22670 979 aa11.01□□□□□ -0.65
NIPBL-205ENST00000505998 USP4Q13107 963 aa11.01□□□□□ -0.65
NIPBL-205ENST00000505998 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
NIPBL-205ENST00000505998 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
NIPBL-205ENST00000505998 TIMP2P16035 220 aa11□□□□□ -0.65
NIPBL-205ENST00000505998 CC2D2BQ6DHV5 1058 aa11□□□□□ -0.65
NIPBL-205ENST00000505998 ZFAND3Q9H8U3 227 aa11□□□□□ -0.65
NIPBL-205ENST00000505998 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
NIPBL-205ENST00000505998 NOD1Q9Y239 953 aa10.99□□□□□ -0.65
NIPBL-205ENST00000505998 CAPN5O15484 640 aaPredicted RBP10.98□□□□□ -0.65
NIPBL-205ENST00000505998 AVPP01185 164 aa10.98□□□□□ -0.65
NIPBL-205ENST00000505998 SCTRP47872 440 aa10.98□□□□□ -0.65
NIPBL-205ENST00000505998 LILRA1O75019 489 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1059.4 ms