RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 A2ML1A8K2U0 1454 aa20.08■□□□□ 0.8
DDX41-205ENST00000505081 ATP7BP35670 1465 aa20.08■□□□□ 0.8
DDX41-205ENST00000505081 RIMS2Q9UQ26 1411 aa20.08■□□□□ 0.8
DDX41-205ENST00000505081 WASLO00401 505 aaPredicted RBP20.08■□□□□ 0.8
DDX41-205ENST00000505081 RBM25P49756 843 aaKnown RBP20.08■□□□□ 0.8
DDX41-205ENST00000505081 BRPF1P55201 1214 aaPredicted RBP20.08■□□□□ 0.8
DDX41-205ENST00000505081 ZNF853P0CG23 659 aa20.07■□□□□ 0.8
DDX41-205ENST00000505081 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
DDX41-205ENST00000505081 IFT57Q9NWB7 429 aa20.07■□□□□ 0.8
DDX41-205ENST00000505081 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
DDX41-205ENST00000505081 BMP2KLQ5H9B9 411 aa20.06■□□□□ 0.8
DDX41-205ENST00000505081 METP08581 1390 aa20.06■□□□□ 0.8
DDX41-205ENST00000505081 CD2BP2O95400 341 aaKnown RBP20.06■□□□□ 0.8
DDX41-205ENST00000505081 TRAK2O60296 914 aa20.06■□□□□ 0.8
DDX41-205ENST00000505081 ZNF428Q96B54 188 aa20.06■□□□□ 0.8
DDX41-205ENST00000505081 RBM42Q9BTD8 480 aaKnown RBP20.06■□□□□ 0.8
DDX41-205ENST00000505081 PTCH1Q13635 1447 aa20.05■□□□□ 0.8
DDX41-205ENST00000505081 NUDT16Q96DE0 195 aaKnown RBP20.05■□□□□ 0.8
DDX41-205ENST00000505081 KIF2CQ99661 725 aa20.05■□□□□ 0.8
DDX41-205ENST00000505081 XRCC6P12956 609 aaKnown RBP eCLIP20.05■□□□□ 0.8
DDX41-205ENST00000505081 KRT24Q2M2I5 525 aa20.05■□□□□ 0.8
DDX41-205ENST00000505081 PANK2Q9BZ23 570 aa20.05■□□□□ 0.8
DDX41-205ENST00000505081 ABCC4O15439 1325 aa20.05■□□□□ 0.8
DDX41-205ENST00000505081 CPSF1Q10570 1443 aaKnown RBP20.04■□□□□ 0.8
DDX41-205ENST00000505081 TBC1D9Q6ZT07 1266 aa20.04■□□□□ 0.8
DDX41-205ENST00000505081 ARHGAP45Q92619 1136 aa20.04■□□□□ 0.8
DDX41-205ENST00000505081 GCC1Q96CN9 775 aa20.04■□□□□ 0.8
DDX41-205ENST00000505081 CPS1P31327 1500 aa20.04■□□□□ 0.8
DDX41-205ENST00000505081 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
DDX41-205ENST00000505081 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
DDX41-205ENST00000505081 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
DDX41-205ENST00000505081 CALD1Q05682 793 aaKnown RBP20.03■□□□□ 0.8
DDX41-205ENST00000505081 L1TD1Q5T7N2 865 aaKnown RBP20.03■□□□□ 0.8
DDX41-205ENST00000505081 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
DDX41-205ENST00000505081 COG3Q96JB2 828 aa20.03■□□□□ 0.8
DDX41-205ENST00000505081 PIK3R4Q99570 1358 aa20.03■□□□□ 0.8
DDX41-205ENST00000505081 EDC4Q6P2E9 1401 aaKnown RBP20.03■□□□□ 0.8
DDX41-205ENST00000505081 FAM43AQ8N2R8 423 aa20.03■□□□□ 0.8
DDX41-205ENST00000505081 CFAP44Q96MT7 982 aa20.03■□□□□ 0.8
DDX41-205ENST00000505081 GOLGA6L3A6NEY3 463 aa20.02■□□□□ 0.8
DDX41-205ENST00000505081 DLG5Q8TDM6 1919 aa20.02■□□□□ 0.8
DDX41-205ENST00000505081 DLC1Q96QB1 1528 aa20.02■□□□□ 0.8
DDX41-205ENST00000505081 HSP90AB1P08238 724 aaKnown RBP20.02■□□□□ 0.79
DDX41-205ENST00000505081 DDIT3P35638 169 aa20.02■□□□□ 0.79
DDX41-205ENST00000505081 SETD1AO15047 1707 aaKnown RBP20.01■□□□□ 0.79
DDX41-205ENST00000505081 RRAGDQ9NQL2 400 aaPredicted RBP20.01■□□□□ 0.79
DDX41-205ENST00000505081 NCOA3Q9Y6Q9 1424 aa20■□□□□ 0.79
DDX41-205ENST00000505081 SNX21Q969T3 373 aa20■□□□□ 0.79
DDX41-205ENST00000505081 TSPOAP1O95153 1857 aa20■□□□□ 0.79
DDX41-205ENST00000505081 CDK12Q9NYV4 1490 aaPredicted RBP20■□□□□ 0.79
DDX41-205ENST00000505081 NUTM2FA1L443 756 aa20■□□□□ 0.79
DDX41-205ENST00000505081 FSD2A1L4K1 749 aa19.99■□□□□ 0.79
DDX41-205ENST00000505081 TNPO1Q92973 898 aaKnown RBP19.99■□□□□ 0.79
DDX41-205ENST00000505081 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
DDX41-205ENST00000505081 GSPT1P15170 499 aaKnown RBP19.98■□□□□ 0.79
DDX41-205ENST00000505081 CCDC61Q9Y6R9 512 aa19.98■□□□□ 0.79
DDX41-205ENST00000505081 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
DDX41-205ENST00000505081 SULT6B1Q6IMI4 303 aa19.97■□□□□ 0.79
DDX41-205ENST00000505081 MCM10Q7L590 875 aa19.97■□□□□ 0.79
DDX41-205ENST00000505081 API5Q9BZZ5 524 aaKnown RBP19.97■□□□□ 0.79
DDX41-205ENST00000505081 SOX12O15370 315 aa19.96■□□□□ 0.79
DDX41-205ENST00000505081 CHMP4BQ9H444 224 aaKnown RBP19.96■□□□□ 0.79
DDX41-205ENST00000505081 AATKQ6ZMQ8 1374 aa19.96■□□□□ 0.79
DDX41-205ENST00000505081 KNDC1Q76NI1 1749 aa19.96■□□□□ 0.79
DDX41-205ENST00000505081 NRXN3Q9Y4C0 1643 aa19.96■□□□□ 0.79
DDX41-205ENST00000505081 LMOD3Q0VAK6 560 aa19.96■□□□□ 0.79
DDX41-205ENST00000505081 APBB1O00213 710 aa19.96■□□□□ 0.79
DDX41-205ENST00000505081 OTUD7AQ8TE49 926 aaPredicted RBP19.96■□□□□ 0.79
DDX41-205ENST00000505081 HSP90AA1P07900 732 aaKnown RBP19.95■□□□□ 0.78
DDX41-205ENST00000505081 EIF4A2Q14240 407 aaKnown RBP19.95■□□□□ 0.78
DDX41-205ENST00000505081 PLEKHM2Q8IWE5 1019 aa19.95■□□□□ 0.78
DDX41-205ENST00000505081 SPATA31D1Q6ZQQ2 1576 aa19.94■□□□□ 0.78
DDX41-205ENST00000505081 DDX11L8A8MPP1 907 aa19.93■□□□□ 0.78
DDX41-205ENST00000505081 GAS2L2Q8NHY3 880 aa19.93■□□□□ 0.78
DDX41-205ENST00000505081 CDC45O75419 566 aa19.92■□□□□ 0.78
DDX41-205ENST00000505081 SMARCA5O60264 1052 aaPredicted RBP19.92■□□□□ 0.78
DDX41-205ENST00000505081 MIS18AQ9NYP9 233 aa19.92■□□□□ 0.78
DDX41-205ENST00000505081 K7ELQ4 463 aaPredicted RBP19.92■□□□□ 0.78
DDX41-205ENST00000505081 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
DDX41-205ENST00000505081 RAB3GAP1Q15042 981 aa19.92■□□□□ 0.78
DDX41-205ENST00000505081 DCTPP1Q9H773 170 aa19.92■□□□□ 0.78
DDX41-205ENST00000505081 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
DDX41-205ENST00000505081 SSFA2P28290 1259 aa19.89■□□□□ 0.78
DDX41-205ENST00000505081 MON2Q7Z3U7 1717 aa19.89■□□□□ 0.77
DDX41-205ENST00000505081 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
DDX41-205ENST00000505081 RGS12O14924 1447 aa19.89■□□□□ 0.77
DDX41-205ENST00000505081 TTC22Q5TAA0 569 aa19.88■□□□□ 0.77
DDX41-205ENST00000505081 GAS2L3Q86XJ1 694 aa19.88■□□□□ 0.77
DDX41-205ENST00000505081 MEIS3Q99687 375 aa19.88■□□□□ 0.77
DDX41-205ENST00000505081 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
DDX41-205ENST00000505081 ROBO2Q9HCK4 1378 aa19.88■□□□□ 0.77
DDX41-205ENST00000505081 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.88■□□□□ 0.77
DDX41-205ENST00000505081 CIZ1Q9ULV3 898 aaPredicted RBP19.88■□□□□ 0.77
DDX41-205ENST00000505081 C3P01024 1663 aa19.88■□□□□ 0.77
DDX41-205ENST00000505081 MSH6P52701 1360 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 TTC21BQ7Z4L5 1316 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 AGLP35573 1532 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 CHL1O00533 1208 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 FOXO3O43524 673 aa19.87■□□□□ 0.77
DDX41-205ENST00000505081 CEP85Q6P2H3 762 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms