RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 PPP1R9BQ96SB3 815 aa17.44■□□□□ 0.38
ATP13A1-214ENST00000497556 ATP7BP35670 1465 aa17.44■□□□□ 0.38
ATP13A1-214ENST00000497556 XRN1Q8IZH2 1706 aaKnown RBP17.44■□□□□ 0.38
ATP13A1-214ENST00000497556 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
ATP13A1-214ENST00000497556 E9PSI1 815 aa17.43■□□□□ 0.38
ATP13A1-214ENST00000497556 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
ATP13A1-214ENST00000497556 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
ATP13A1-214ENST00000497556 NCOA3Q9Y6Q9 1424 aa17.43■□□□□ 0.38
ATP13A1-214ENST00000497556 RLBP1P12271 317 aa17.42■□□□□ 0.38
ATP13A1-214ENST00000497556 HDGFL2Q7Z4V5 671 aaPredicted RBP17.42■□□□□ 0.38
ATP13A1-214ENST00000497556 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
ATP13A1-214ENST00000497556 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
ATP13A1-214ENST00000497556 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
ATP13A1-214ENST00000497556 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
ATP13A1-214ENST00000497556 FAM13BQ9NYF5 915 aa17.41■□□□□ 0.38
ATP13A1-214ENST00000497556 DDIT3P35638 169 aa17.41■□□□□ 0.38
ATP13A1-214ENST00000497556 PCDHB15Q9Y5E8 787 aa17.41■□□□□ 0.38
ATP13A1-214ENST00000497556 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
ATP13A1-214ENST00000497556 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
ATP13A1-214ENST00000497556 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
ATP13A1-214ENST00000497556 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.37
ATP13A1-214ENST00000497556 AKAP12Q02952 1782 aa17.39■□□□□ 0.37
ATP13A1-214ENST00000497556 MSNP26038 577 aaKnown RBP17.39■□□□□ 0.37
ATP13A1-214ENST00000497556 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
ATP13A1-214ENST00000497556 CDC42BPGQ6DT37 1551 aa17.39■□□□□ 0.37
ATP13A1-214ENST00000497556 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
ATP13A1-214ENST00000497556 PMFBP1Q8TBY8 1022 aa17.38■□□□□ 0.37
ATP13A1-214ENST00000497556 SHPRHQ149N8 1683 aa17.38■□□□□ 0.37
ATP13A1-214ENST00000497556 TOPAZ1Q8N9V7 1692 aa17.38■□□□□ 0.37
ATP13A1-214ENST00000497556 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
ATP13A1-214ENST00000497556 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
ATP13A1-214ENST00000497556 GGNBP2Q9H3C7 697 aa17.38■□□□□ 0.37
ATP13A1-214ENST00000497556 PRR36Q9H6K5 1346 aa17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 PDZRN3Q9UPQ7 1066 aa17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 CPSF1Q10570 1443 aaKnown RBP17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 FYB1O15117 783 aa17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 SKOR2Q2VWA4 1001 aaPredicted RBP17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 PIK3R4Q99570 1358 aa17.37■□□□□ 0.37
ATP13A1-214ENST00000497556 NASPP49321 788 aaPredicted RBP17.36■□□□□ 0.37
ATP13A1-214ENST00000497556 HSCBQ8IWL3 235 aa17.36■□□□□ 0.37
ATP13A1-214ENST00000497556 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
ATP13A1-214ENST00000497556 MTERF4Q7Z6M4 381 aaKnown RBP17.36■□□□□ 0.37
ATP13A1-214ENST00000497556 R3HCC1Q9Y3T6 440 aaKnown RBP17.36■□□□□ 0.37
ATP13A1-214ENST00000497556 RARSP54136 660 aaKnown RBP17.35■□□□□ 0.37
ATP13A1-214ENST00000497556 KCNA6P17658 529 aa17.34■□□□□ 0.37
ATP13A1-214ENST00000497556 MTHFSP49914 203 aa17.34■□□□□ 0.37
ATP13A1-214ENST00000497556 GBP4Q96PP9 640 aa17.34■□□□□ 0.37
ATP13A1-214ENST00000497556 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
ATP13A1-214ENST00000497556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.33■□□□□ 0.37
ATP13A1-214ENST00000497556 UQCRHLA0A096LP55 91 aa17.33■□□□□ 0.36
ATP13A1-214ENST00000497556 UQCRHP07919 91 aa17.33■□□□□ 0.36
ATP13A1-214ENST00000497556 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.36
ATP13A1-214ENST00000497556 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
ATP13A1-214ENST00000497556 PTMSP20962 102 aa17.32■□□□□ 0.36
ATP13A1-214ENST00000497556 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
ATP13A1-214ENST00000497556 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
ATP13A1-214ENST00000497556 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
ATP13A1-214ENST00000497556 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 ANP32BQ92688 251 aaKnown RBP17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 ZHX1Q9UKY1 873 aaPredicted RBP17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 NPHP4O75161 1426 aaPredicted RBP17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 ZNF500O60304 480 aaPredicted RBP17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 HS1BP3Q53T59 392 aa17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 UTP14CQ5TAP6 766 aaKnown RBP17.31■□□□□ 0.36
ATP13A1-214ENST00000497556 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
ATP13A1-214ENST00000497556 DYNC1I1O14576 645 aa17.3■□□□□ 0.36
ATP13A1-214ENST00000497556 NRKQ7Z2Y5 1582 aa17.29■□□□□ 0.36
ATP13A1-214ENST00000497556 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
ATP13A1-214ENST00000497556 NALCNQ8IZF0 1738 aa17.29■□□□□ 0.36
ATP13A1-214ENST00000497556 DMTNQ08495 405 aa17.29■□□□□ 0.36
ATP13A1-214ENST00000497556 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
ATP13A1-214ENST00000497556 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
ATP13A1-214ENST00000497556 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
ATP13A1-214ENST00000497556 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
ATP13A1-214ENST00000497556 SNX21Q969T3 373 aa17.28■□□□□ 0.36
ATP13A1-214ENST00000497556 FMN2Q9NZ56 1722 aa17.27■□□□□ 0.36
ATP13A1-214ENST00000497556 NME9Q86XW9 330 aa17.27■□□□□ 0.35
ATP13A1-214ENST00000497556 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.35
ATP13A1-214ENST00000497556 ACEP12821 1306 aa17.26■□□□□ 0.35
ATP13A1-214ENST00000497556 ARID3AQ99856 593 aa17.26■□□□□ 0.35
ATP13A1-214ENST00000497556 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-214ENST00000497556 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-214ENST00000497556 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
ATP13A1-214ENST00000497556 XPCQ01831 940 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-214ENST00000497556 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
ATP13A1-214ENST00000497556 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
ATP13A1-214ENST00000497556 PDE4CQ08493 712 aa17.24■□□□□ 0.35
ATP13A1-214ENST00000497556 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
ATP13A1-214ENST00000497556 CCDC94Q9BW85 323 aaPredicted RBP17.24■□□□□ 0.35
ATP13A1-214ENST00000497556 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
ATP13A1-214ENST00000497556 USP6P35125 1406 aa17.24■□□□□ 0.35
ATP13A1-214ENST00000497556 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
ATP13A1-214ENST00000497556 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
ATP13A1-214ENST00000497556 PDLIM2Q96JY6 352 aa17.23■□□□□ 0.35
ATP13A1-214ENST00000497556 RBM25P49756 843 aaKnown RBP17.23■□□□□ 0.35
ATP13A1-214ENST00000497556 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
ATP13A1-214ENST00000497556 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms