RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 EML3Q32P44 896 aa8.24□□□□□ -1.09
SRRM1-215ENST00000488317 MAP7D1Q3KQU3 841 aa8.24□□□□□ -1.09
SRRM1-215ENST00000488317 CDAN1Q8IWY9 1227 aa8.24□□□□□ -1.09
SRRM1-215ENST00000488317 PHTF2Q8N3S3 785 aa8.24□□□□□ -1.09
SRRM1-215ENST00000488317 TMEM164Q5U3C3 297 aa8.23□□□□□ -1.09
SRRM1-215ENST00000488317 NPM2Q86SE8 214 aaKnown RBP8.23□□□□□ -1.09
SRRM1-215ENST00000488317 FAM196BA6NMK8 535 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L21D6R901 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
SRRM1-215ENST00000488317 B4GALNT3Q6L9W6 998 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 FAM200AQ8TCP9 573 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 STK32AQ8WU08 396 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 FOXJ1Q92949 421 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 SLC10A4Q96EP9 437 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 ZMIZ1Q9ULJ6 1067 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
SRRM1-215ENST00000488317 ZBTB24O43167 697 aaPredicted RBP8.21□□□□□ -1.1
SRRM1-215ENST00000488317 GIGYF1O75420 1035 aaPredicted RBP8.21□□□□□ -1.1
SRRM1-215ENST00000488317 TSGA10IPQ3SY00 556 aa8.21□□□□□ -1.1
SRRM1-215ENST00000488317 SH3RF1Q7Z6J0 888 aa8.21□□□□□ -1.1
SRRM1-215ENST00000488317 TRIM50Q86XT4 487 aa8.21□□□□□ -1.1
SRRM1-215ENST00000488317 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
SRRM1-215ENST00000488317 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
SRRM1-215ENST00000488317 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
SRRM1-215ENST00000488317 RNF20Q5VTR2 975 aa8.2□□□□□ -1.1
SRRM1-215ENST00000488317 OGFOD1Q8N543 542 aa8.2□□□□□ -1.1
SRRM1-215ENST00000488317 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
SRRM1-215ENST00000488317 PPEF1O14829 653 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-215ENST00000488317 ATP1A2P50993 1020 aa8.19□□□□□ -1.1
SRRM1-215ENST00000488317 PTK7Q13308 1070 aa8.19□□□□□ -1.1
SRRM1-215ENST00000488317 ZNF594Q96JF6 807 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-215ENST00000488317 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-215ENST00000488317 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
SRRM1-215ENST00000488317 KCNC4Q03721 635 aa8.18□□□□□ -1.1
SRRM1-215ENST00000488317 NBPF20Q3BBV1 942 aa8.18□□□□□ -1.1
SRRM1-215ENST00000488317 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
SRRM1-215ENST00000488317 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
SRRM1-215ENST00000488317 POTEGQ6S5H5 508 aa8.18□□□□□ -1.1
SRRM1-215ENST00000488317 ANKMY2Q8IV38 441 aa8.18□□□□□ -1.1
SRRM1-215ENST00000488317 CCDC85AQ96PX6 553 aaPredicted RBP8.18□□□□□ -1.1
SRRM1-215ENST00000488317 DNAAF2Q9NVR5 837 aaKnown RBP8.18□□□□□ -1.1
SRRM1-215ENST00000488317 CHIC2Q9UKJ5 165 aa8.18□□□□□ -1.1
SRRM1-215ENST00000488317 RBM19Q9Y4C8 960 aaKnown RBP8.18□□□□□ -1.1
SRRM1-215ENST00000488317 SH3BP2P78314 561 aa8.17□□□□□ -1.1
SRRM1-215ENST00000488317 DPYDQ12882 1025 aa8.17□□□□□ -1.1
SRRM1-215ENST00000488317 GGCXP38435 758 aa8.16□□□□□ -1.1
SRRM1-215ENST00000488317 RAB15P59190 212 aa8.16□□□□□ -1.1
SRRM1-215ENST00000488317 PSME1Q06323 249 aa8.16□□□□□ -1.1
SRRM1-215ENST00000488317 CLDN10P78369 228 aa8.15□□□□□ -1.1
SRRM1-215ENST00000488317 LARGE2Q8N3Y3 721 aa8.15□□□□□ -1.1
SRRM1-215ENST00000488317 SIRT1Q96EB6 747 aa8.15□□□□□ -1.1
SRRM1-215ENST00000488317 CDV3Q9UKY7 258 aaKnown RBP8.15□□□□□ -1.1
SRRM1-215ENST00000488317 PCDHB11Q9Y5F2 797 aa8.15□□□□□ -1.1
SRRM1-215ENST00000488317 GTF2IP78347 998 aa8.14□□□□□ -1.11
SRRM1-215ENST00000488317 USP4Q13107 963 aa8.14□□□□□ -1.11
SRRM1-215ENST00000488317 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
SRRM1-215ENST00000488317 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
SRRM1-215ENST00000488317 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
SRRM1-215ENST00000488317 TRIM32Q13049 653 aa8.13□□□□□ -1.11
SRRM1-215ENST00000488317 C1QTNF2Q9BXJ5 285 aa8.13□□□□□ -1.11
SRRM1-215ENST00000488317 ESF1Q9H501 851 aaKnown RBP8.13□□□□□ -1.11
SRRM1-215ENST00000488317 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
SRRM1-215ENST00000488317 SSFA2P28290 1259 aa8.12□□□□□ -1.11
SRRM1-215ENST00000488317 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-215ENST00000488317 CCDC102BQ68D86 513 aa8.12□□□□□ -1.11
SRRM1-215ENST00000488317 CCDC125Q86Z20 511 aa8.12□□□□□ -1.11
SRRM1-215ENST00000488317 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
SRRM1-215ENST00000488317 SEPT12Q8IYM1 358 aa8.12□□□□□ -1.11
SRRM1-215ENST00000488317 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
SRRM1-215ENST00000488317 KCTD15Q96SI1 283 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-215ENST00000488317 PCDH10Q9P2E7 1040 aa8.12□□□□□ -1.11
SRRM1-215ENST00000488317 ESPNB1AK53 854 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-215ENST00000488317 MYCP01106 439 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-215ENST00000488317 ATP2B4P23634 1241 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 VARSP26640 1264 aaKnown RBP8.11□□□□□ -1.11
SRRM1-215ENST00000488317 SEC13P55735 322 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 FAM69CQ0P6D2 419 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 ARID5BQ14865 1188 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 CCDC27Q2M243 656 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 VASH1Q7L8A9 365 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-215ENST00000488317 ANKLE1Q8NAG6 615 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 TPCN2Q8NHX9 752 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
SRRM1-215ENST00000488317 GNEQ9Y223 722 aaKnown RBP8.11□□□□□ -1.11
SRRM1-215ENST00000488317 SWI5Q1ZZU3 235 aa8.1□□□□□ -1.11
SRRM1-215ENST00000488317 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.11
SRRM1-215ENST00000488317 RGS22Q8NE09 1264 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms