RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 DDB1Q16531 1140 aa22.84■■□□□ 1.25
U2AF1-211ENST00000486519 NUDT16Q96DE0 195 aaKnown RBP22.84■■□□□ 1.25
U2AF1-211ENST00000486519 ARHGEF28Q8N1W1 1705 aaKnown RBP22.83■■□□□ 1.25
U2AF1-211ENST00000486519 C11orf95C9JLR9 678 aaPredicted RBP22.83■■□□□ 1.25
U2AF1-211ENST00000486519 COL18A1P39060 1754 aa22.82■■□□□ 1.24
U2AF1-211ENST00000486519 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
U2AF1-211ENST00000486519 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
U2AF1-211ENST00000486519 RGPD5Q99666 1765 aa22.8■■□□□ 1.24
U2AF1-211ENST00000486519 ACEP12821 1306 aa22.8■■□□□ 1.24
U2AF1-211ENST00000486519 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
U2AF1-211ENST00000486519 ZBTB7CA1YPR0 619 aa22.79■■□□□ 1.24
U2AF1-211ENST00000486519 ABTB2Q8N961 1025 aa22.79■■□□□ 1.24
U2AF1-211ENST00000486519 MPHOSPH9Q99550 1183 aa22.79■■□□□ 1.24
U2AF1-211ENST00000486519 BCL9O00512 1426 aa22.79■■□□□ 1.24
U2AF1-211ENST00000486519 GCP02774 474 aa22.78■■□□□ 1.24
U2AF1-211ENST00000486519 KLHL34Q8N239 644 aa22.78■■□□□ 1.24
U2AF1-211ENST00000486519 NLGN2Q8NFZ4 835 aa22.78■■□□□ 1.24
U2AF1-211ENST00000486519 ZNF827Q17R98 1081 aa22.77■■□□□ 1.24
U2AF1-211ENST00000486519 NHSQ6T4R5 1651 aa22.77■■□□□ 1.24
U2AF1-211ENST00000486519 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
U2AF1-211ENST00000486519 TUBGCP6Q96RT7 1819 aa22.76■■□□□ 1.23
U2AF1-211ENST00000486519 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
U2AF1-211ENST00000486519 YBX3P16989 372 aaKnown RBP eCLIP22.74■■□□□ 1.23
U2AF1-211ENST00000486519 BTAF1O14981 1849 aa22.73■■□□□ 1.23
U2AF1-211ENST00000486519 TOM1L2Q6ZVM7 507 aa22.72■■□□□ 1.23
U2AF1-211ENST00000486519 AXIN2Q9Y2T1 843 aa22.72■■□□□ 1.23
U2AF1-211ENST00000486519 HSPA6P17066 643 aa22.71■■□□□ 1.23
U2AF1-211ENST00000486519 CDK19Q9BWU1 502 aa22.71■■□□□ 1.23
U2AF1-211ENST00000486519 SLIT3O75094 1523 aa22.7■■□□□ 1.22
U2AF1-211ENST00000486519 QSER1Q2KHR3 1735 aa22.7■■□□□ 1.22
U2AF1-211ENST00000486519 ACSBG1Q96GR2 724 aa22.68■■□□□ 1.22
U2AF1-211ENST00000486519 LRRC4BQ9NT99 713 aa22.68■■□□□ 1.22
U2AF1-211ENST00000486519 PLEKHG3A1L390 1219 aa22.67■■□□□ 1.22
U2AF1-211ENST00000486519 NLRP13Q86W25 1043 aa22.67■■□□□ 1.22
U2AF1-211ENST00000486519 WDR17Q8IZU2 1322 aa22.66■■□□□ 1.22
U2AF1-211ENST00000486519 PIK3C2AO00443 1686 aa22.65■■□□□ 1.22
U2AF1-211ENST00000486519 CCDC61Q9Y6R9 512 aa22.64■■□□□ 1.21
U2AF1-211ENST00000486519 ZNF526Q8TF50 670 aaPredicted RBP22.63■■□□□ 1.21
U2AF1-211ENST00000486519 KDM2AQ9Y2K7 1162 aa22.63■■□□□ 1.21
U2AF1-211ENST00000486519 AKT1S1Q96B36 256 aa22.62■■□□□ 1.21
U2AF1-211ENST00000486519 TNS2Q63HR2 1409 aa22.62■■□□□ 1.21
U2AF1-211ENST00000486519 PNPLA7Q6ZV29 1317 aa22.61■■□□□ 1.21
U2AF1-211ENST00000486519 KAT6BQ8WYB5 2073 aa22.61■■□□□ 1.21
U2AF1-211ENST00000486519 ADCY9O60503 1353 aa22.61■■□□□ 1.21
U2AF1-211ENST00000486519 TRPM1Q7Z4N2 1603 aa22.6■■□□□ 1.21
U2AF1-211ENST00000486519 GPBP1L1Q9HC44 474 aaPredicted RBP22.59■■□□□ 1.21
U2AF1-211ENST00000486519 CPSF1Q10570 1443 aaKnown RBP22.58■■□□□ 1.21
U2AF1-211ENST00000486519 PPIP5K1Q6PFW1 1433 aa22.58■■□□□ 1.21
U2AF1-211ENST00000486519 EXOC5O00471 708 aa22.58■■□□□ 1.21
U2AF1-211ENST00000486519 CDCA7Q9BWT1 371 aaPredicted RBP22.58■■□□□ 1.21
U2AF1-211ENST00000486519 USP6P35125 1406 aa22.57■■□□□ 1.2
U2AF1-211ENST00000486519 KCNQ4P56696 695 aa22.57■■□□□ 1.2
U2AF1-211ENST00000486519 NLRP6P59044 892 aa22.57■■□□□ 1.2
U2AF1-211ENST00000486519 CARD10Q9BWT7 1032 aa22.57■■□□□ 1.2
U2AF1-211ENST00000486519 ABCC6O95255 1503 aa22.57■■□□□ 1.2
U2AF1-211ENST00000486519 POLD1P28340 1107 aa22.56■■□□□ 1.2
U2AF1-211ENST00000486519 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-211ENST00000486519 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
U2AF1-211ENST00000486519 CAPN15O75808 1086 aa22.53■■□□□ 1.2
U2AF1-211ENST00000486519 DCAF11Q8TEB1 546 aa22.53■■□□□ 1.2
U2AF1-211ENST00000486519 SLC16A10Q8TF71 515 aa22.53■■□□□ 1.2
U2AF1-211ENST00000486519 CSB-PGBD3P0DP91 1061 aa22.52■■□□□ 1.2
U2AF1-211ENST00000486519 SOX12O15370 315 aa22.51■■□□□ 1.19
U2AF1-211ENST00000486519 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
U2AF1-211ENST00000486519 DNAJC5GQ8N7S2 189 aa22.51■■□□□ 1.19
U2AF1-211ENST00000486519 KIF3CO14782 793 aa22.5■■□□□ 1.19
U2AF1-211ENST00000486519 COL13A1Q5TAT6 717 aaPredicted RBP22.5■■□□□ 1.19
U2AF1-211ENST00000486519 CABP2Q9NPB3 220 aa22.5■■□□□ 1.19
U2AF1-211ENST00000486519 NFAT5O94916 1531 aa22.48■■□□□ 1.19
U2AF1-211ENST00000486519 QRICH2Q9H0J4 1663 aa22.48■■□□□ 1.19
U2AF1-211ENST00000486519 LY75O60449 1722 aa22.47■■□□□ 1.19
U2AF1-211ENST00000486519 CCDC7Q96M83 1385 aa22.47■■□□□ 1.19
U2AF1-211ENST00000486519 MSL1Q68DK7 614 aa22.46■■□□□ 1.19
U2AF1-211ENST00000486519 TFCP2L1Q9NZI6 479 aa22.45■■□□□ 1.18
U2AF1-211ENST00000486519 SRPK2P78362 688 aaKnown RBP22.44■■□□□ 1.18
U2AF1-211ENST00000486519 CABP1Q9NZU7 370 aa22.44■■□□□ 1.18
U2AF1-211ENST00000486519 WWC3Q9ULE0 1092 aa22.44■■□□□ 1.18
U2AF1-211ENST00000486519 WDR90Q96KV7 1748 aa22.42■■□□□ 1.18
U2AF1-211ENST00000486519 DOT1LQ8TEK3 1739 aa22.41■■□□□ 1.18
U2AF1-211ENST00000486519 COL23A1Q86Y22 540 aaPredicted RBP22.41■■□□□ 1.18
U2AF1-211ENST00000486519 APLP1P51693 650 aa22.4■■□□□ 1.18
U2AF1-211ENST00000486519 SLC27A3Q5K4L6 730 aa22.4■■□□□ 1.18
U2AF1-211ENST00000486519 HTRA3P83110 453 aa22.38■■□□□ 1.17
U2AF1-211ENST00000486519 LTN1O94822 1766 aa22.37■■□□□ 1.17
U2AF1-211ENST00000486519 NSD2O96028 1365 aa22.37■■□□□ 1.17
U2AF1-211ENST00000486519 MSH5O43196 834 aa22.36■■□□□ 1.17
U2AF1-211ENST00000486519 NBPF1Q3BBV0 1214 aa22.36■■□□□ 1.17
U2AF1-211ENST00000486519 KIAA1210Q9ULL0 1709 aa22.36■■□□□ 1.17
U2AF1-211ENST00000486519 IL2RBP14784 551 aa22.35■■□□□ 1.17
U2AF1-211ENST00000486519 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
U2AF1-211ENST00000486519 ERBB3P21860 1342 aa22.34■■□□□ 1.17
U2AF1-211ENST00000486519 TTC21BQ7Z4L5 1316 aa22.34■■□□□ 1.17
U2AF1-211ENST00000486519 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
U2AF1-211ENST00000486519 PRELPP51888 382 aa22.32■■□□□ 1.16
U2AF1-211ENST00000486519 CD2APQ9Y5K6 639 aa22.31■■□□□ 1.16
U2AF1-211ENST00000486519 C5P01031 1676 aa22.3■■□□□ 1.16
U2AF1-211ENST00000486519 PRIM1P49642 420 aaKnown RBP22.3■■□□□ 1.16
U2AF1-211ENST00000486519 DDX54Q8TDD1 881 aaKnown RBP22.3■■□□□ 1.16
U2AF1-211ENST00000486519 USP54Q70EL1 1684 aa22.3■■□□□ 1.16
U2AF1-211ENST00000486519 CICQ96RK0 1608 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms