RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 GPHNQ9NQX3 736 aaPredicted RBP4.53□□□□□ -1.68
FXN-204ENST00000484259 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.53□□□□□ -1.68
FXN-204ENST00000484259 SWAP70Q9UH65 585 aa4.53□□□□□ -1.68
FXN-204ENST00000484259 ATP1B4Q9UN42 357 aaPredicted RBP4.53□□□□□ -1.68
FXN-204ENST00000484259 HPS5Q9UPZ3 1129 aa4.53□□□□□ -1.68
FXN-204ENST00000484259 KIF4AO95239 1232 aa4.52□□□□□ -1.69
FXN-204ENST00000484259 ERCC5P28715 1186 aaPredicted RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 MLLT3P42568 568 aaPredicted RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 XPCQ01831 940 aaPredicted RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 TTLL12Q14166 644 aaPredicted RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 AXDND1Q5T1B0 1012 aaPredicted RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 RNF187Q5TA31 235 aaPredicted RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 NBPF11Q86T75 865 aa4.52□□□□□ -1.69
FXN-204ENST00000484259 NPAS4Q8IUM7 802 aa4.52□□□□□ -1.69
FXN-204ENST00000484259 OXER1Q8TDS5 423 aa4.52□□□□□ -1.69
FXN-204ENST00000484259 UPF1Q92900 1129 aaKnown RBP eCLIP4.52□□□□□ -1.69
FXN-204ENST00000484259 GNL3LQ9NVN8 582 aaKnown RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.52□□□□□ -1.69
FXN-204ENST00000484259 TMEM88BA6NKF7 163 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 HOXA2O43364 376 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 WIPF1O43516 503 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 DEKP35659 375 aaKnown RBP4.51□□□□□ -1.69
FXN-204ENST00000484259 CNGB1Q14028 1251 aaPredicted RBP4.51□□□□□ -1.69
FXN-204ENST00000484259 SUZ12Q15022 739 aaKnown RBP4.51□□□□□ -1.69
FXN-204ENST00000484259 NBPF1Q3BBV0 1214 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 TJAP1Q5JTD0 557 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 ZNF280DQ6N043 979 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 LRCH3Q96II8 777 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 TRIM34Q9BYJ4 488 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 TANGO6Q9C0B7 1094 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 GEMIN8Q9NWZ8 242 aaKnown RBP4.51□□□□□ -1.69
FXN-204ENST00000484259 FBXO9Q9UK97 447 aaPredicted RBP4.51□□□□□ -1.69
FXN-204ENST00000484259 WWC3Q9ULE0 1092 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 NUB1Q9Y5A7 615 aa4.51□□□□□ -1.69
FXN-204ENST00000484259 GOLIM4O00461 696 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 PDE4AP27815 886 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 GYS2P54840 703 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 CCDC144BQ3MJ40 725 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 CFAP70Q5T0N1 1121 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 CCDC146Q8IYE0 955 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 ARMC5Q96C12 935 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 SNRKQ9NRH2 765 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 KIAA1468Q9P260 1216 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 ABCC9O60706 1549 aa4.5□□□□□ -1.69
FXN-204ENST00000484259 EPB41L2O43491 1005 aaKnown RBP4.49□□□□□ -1.69
FXN-204ENST00000484259 ZNF500O60304 480 aaPredicted RBP4.49□□□□□ -1.69
FXN-204ENST00000484259 ATG7O95352 703 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 MS4A1P11836 297 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 ATP2B1P20020 1258 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 BDNFP23560 247 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 PPP4CP60510 307 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 SETDB1Q15047 1291 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 GIGYF2Q6Y7W6 1299 aaKnown RBP4.49□□□□□ -1.69
FXN-204ENST00000484259 C11orf96Q7Z7L8 435 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 RPS6KC1Q96S38 1066 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 IL21Q9HBE4 155 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 GDPD2Q9HCC8 539 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 GABBR1Q9UBS5 961 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 SEPT9Q9UHD8 586 aaPredicted RBP4.49□□□□□ -1.69
FXN-204ENST00000484259 FRMD4BQ9Y2L6 1034 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 TBX22Q9Y458 520 aa4.49□□□□□ -1.69
FXN-204ENST00000484259 POM121CA8CG34 1229 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 GPR37O15354 613 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 PPP1R37O75864 691 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 RECKO95980 971 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 GGCXP38435 758 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 RHBDL3P58872 404 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 TMEM259Q4ZIN3 620 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 SOGA3Q5TF21 947 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 HDGFL1Q5TGJ6 251 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 CEP120Q8N960 986 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 PIK3R5Q8WYR1 880 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 TSPAN18Q96SJ8 248 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 NAP1L4Q99733 375 aaKnown RBP4.48□□□□□ -1.69
FXN-204ENST00000484259 LARP6Q9BRS8 491 aaKnown RBP4.48□□□□□ -1.69
FXN-204ENST00000484259 PPP1R12CQ9BZL4 782 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 SPC25Q9HBM1 224 aa4.48□□□□□ -1.69
FXN-204ENST00000484259 FEZ2Q9UHY8 353 aaPredicted RBP4.48□□□□□ -1.69
FXN-204ENST00000484259 ANKRD33BA6NCL7 494 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 FAM181BA6NEQ2 426 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 STK10O94804 968 aaKnown RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 COL9A1P20849 921 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 HSD3B2P26439 372 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 SSFA2P28290 1259 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 MAN1A1P33908 653 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 POU5F1Q01860 360 aaKnown RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 HDAC1Q13547 482 aaPredicted RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 MFSD10Q14728 455 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 FAM98CQ17RN3 349 aaKnown RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 CSPP1Q1MSJ5 1256 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 NBPF20Q3BBV1 942 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 NOM1Q5C9Z4 860 aaKnown RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 TRIM67Q6ZTA4 783 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 PCGF5Q86SE9 256 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 SLC43A3Q8NBI5 491 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 PROCA1Q8NCQ7 364 aaPredicted RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 ANP32BQ92688 251 aaKnown RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 MTRQ99707 1265 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 IRF2BPLQ9H1B7 796 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 TMX4Q9H1E5 349 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms