RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 BRPF3Q9ULD4 1205 aa18.92■□□□□ 0.62
ATG4B-220ENST00000482507 PPIP5K1Q6PFW1 1433 aa18.92■□□□□ 0.62
ATG4B-220ENST00000482507 FBLN1P23142 703 aa18.91■□□□□ 0.62
ATG4B-220ENST00000482507 RIPK4P57078 832 aa18.91■□□□□ 0.62
ATG4B-220ENST00000482507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.91■□□□□ 0.621e-8■□□□□ 9.2
ATG4B-220ENST00000482507 RTN4Q9NQC3 1192 aaKnown RBP18.91■□□□□ 0.62
ATG4B-220ENST00000482507 PNPLA6Q8IY17 1366 aa18.91■□□□□ 0.62
ATG4B-220ENST00000482507 NOB1Q9ULX3 412 aaKnown RBP18.9■□□□□ 0.62
ATG4B-220ENST00000482507 ATF7IPQ6VMQ6 1270 aa18.9■□□□□ 0.62
ATG4B-220ENST00000482507 SLKQ9H2G2 1235 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-220ENST00000482507 TMEM94Q12767 1356 aa18.89■□□□□ 0.61
ATG4B-220ENST00000482507 IL16Q14005 1332 aa18.89■□□□□ 0.61
ATG4B-220ENST00000482507 DIAPH1O60610 1272 aaKnown RBP18.89■□□□□ 0.61
ATG4B-220ENST00000482507 HDGFL2Q7Z4V5 671 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-220ENST00000482507 ITPRIPQ8IWB1 547 aa18.89■□□□□ 0.61
ATG4B-220ENST00000482507 ANTXR1Q9H6X2 564 aa18.89■□□□□ 0.61
ATG4B-220ENST00000482507 BECN1Q14457 450 aa18.88■□□□□ 0.61
ATG4B-220ENST00000482507 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
ATG4B-220ENST00000482507 ATP7BP35670 1465 aa18.87■□□□□ 0.61
ATG4B-220ENST00000482507 HDAC1Q13547 482 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-220ENST00000482507 TBC1D2Q9BYX2 928 aa18.87■□□□□ 0.61
ATG4B-220ENST00000482507 ACEP12821 1306 aa18.87■□□□□ 0.61
ATG4B-220ENST00000482507 DDX19BQ9UMR2 479 aa18.85■□□□□ 0.61
ATG4B-220ENST00000482507 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
ATG4B-220ENST00000482507 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
ATG4B-220ENST00000482507 C19orf44Q9H6X5 657 aa18.85■□□□□ 0.61
ATG4B-220ENST00000482507 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
ATG4B-220ENST00000482507 UPF2Q9HAU5 1272 aaKnown RBP18.84■□□□□ 0.61
ATG4B-220ENST00000482507 ZBTB40Q9NUA8 1239 aa18.84■□□□□ 0.61
ATG4B-220ENST00000482507 STRCP1A6NGW2 1772 aa18.84■□□□□ 0.61
ATG4B-220ENST00000482507 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-220ENST00000482507 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
ATG4B-220ENST00000482507 ZRANB1Q9UGI0 708 aa18.84■□□□□ 0.61
ATG4B-220ENST00000482507 KIF20BQ96Q89 1820 aa18.84■□□□□ 0.61
ATG4B-220ENST00000482507 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.61
ATG4B-220ENST00000482507 POLKQ9UBT6 870 aa18.83■□□□□ 0.61
ATG4B-220ENST00000482507 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.61
ATG4B-220ENST00000482507 SMC5Q8IY18 1101 aa18.83■□□□□ 0.6
ATG4B-220ENST00000482507 CDC42BPGQ6DT37 1551 aa18.83■□□□□ 0.6
ATG4B-220ENST00000482507 PLEKHG3A1L390 1219 aa18.82■□□□□ 0.6
ATG4B-220ENST00000482507 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
ATG4B-220ENST00000482507 PRKCSHP14314 528 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-220ENST00000482507 NWD1Q149M9 1564 aa18.81■□□□□ 0.6
ATG4B-220ENST00000482507 FCHSD2O94868 740 aa18.81■□□□□ 0.6
ATG4B-220ENST00000482507 NME9Q86XW9 330 aa18.81■□□□□ 0.6
ATG4B-220ENST00000482507 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
ATG4B-220ENST00000482507 NALCNQ8IZF0 1738 aa18.81■□□□□ 0.6
ATG4B-220ENST00000482507 CPSF1Q10570 1443 aaKnown RBP18.8■□□□□ 0.6
ATG4B-220ENST00000482507 ATF3P18847 181 aa18.8■□□□□ 0.6
ATG4B-220ENST00000482507 THUMPD2Q9BTF0 503 aaKnown RBP18.8■□□□□ 0.6
ATG4B-220ENST00000482507 MFAP1P55081 439 aaKnown RBP18.8■□□□□ 0.6
ATG4B-220ENST00000482507 XPCQ01831 940 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-220ENST00000482507 KIF16BQ96L93 1317 aa18.79■□□□□ 0.6
ATG4B-220ENST00000482507 HMOX1P09601 288 aa18.79■□□□□ 0.6
ATG4B-220ENST00000482507 PHF8Q9UPP1 1060 aa18.79■□□□□ 0.6
ATG4B-220ENST00000482507 FOXO3O43524 673 aa18.78■□□□□ 0.6
ATG4B-220ENST00000482507 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
ATG4B-220ENST00000482507 C22orf23Q9BZE7 217 aa18.78■□□□□ 0.6
ATG4B-220ENST00000482507 ALDH1L2Q3SY69 923 aa18.78■□□□□ 0.6
ATG4B-220ENST00000482507 SPRYD3Q8NCJ5 442 aa18.78■□□□□ 0.6
ATG4B-220ENST00000482507 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
ATG4B-220ENST00000482507 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
ATG4B-220ENST00000482507 DDX17Q92841 729 aaKnown RBP18.77■□□□□ 0.6
ATG4B-220ENST00000482507 RGPD8O14715 1765 aaPredicted RBP18.77■□□□□ 0.59
ATG4B-220ENST00000482507 IPO8O15397 1037 aaKnown RBP18.76■□□□□ 0.59
ATG4B-220ENST00000482507 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
ATG4B-220ENST00000482507 TSPYL6Q8N831 410 aa18.76■□□□□ 0.59
ATG4B-220ENST00000482507 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
ATG4B-220ENST00000482507 NUCB1Q02818 461 aa18.75■□□□□ 0.59
ATG4B-220ENST00000482507 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
ATG4B-220ENST00000482507 NFE2L2Q16236 605 aa18.74■□□□□ 0.59
ATG4B-220ENST00000482507 VAMP4O75379 141 aa18.74■□□□□ 0.59
ATG4B-220ENST00000482507 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
ATG4B-220ENST00000482507 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
ATG4B-220ENST00000482507 SOX12O15370 315 aa18.73■□□□□ 0.59
ATG4B-220ENST00000482507 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-220ENST00000482507 PSME1Q06323 249 aa18.73■□□□□ 0.59
ATG4B-220ENST00000482507 ANKARQ7Z5J8 1434 aa18.73■□□□□ 0.59
ATG4B-220ENST00000482507 MSH6P52701 1360 aa18.73■□□□□ 0.59
ATG4B-220ENST00000482507 IL13P35225 146 aa18.73■□□□□ 0.59
ATG4B-220ENST00000482507 MRPL50Q8N5N7 158 aaKnown RBP18.73■□□□□ 0.59
ATG4B-220ENST00000482507 CADPS2Q86UW7 1296 aa18.72■□□□□ 0.59
ATG4B-220ENST00000482507 USP6P35125 1406 aa18.72■□□□□ 0.59
ATG4B-220ENST00000482507 EDC4Q6P2E9 1401 aaKnown RBP18.72■□□□□ 0.59
ATG4B-220ENST00000482507 ZBTB7BO15156 539 aaPredicted RBP18.72■□□□□ 0.59
ATG4B-220ENST00000482507 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.59
ATG4B-220ENST00000482507 FMN2Q9NZ56 1722 aa18.71■□□□□ 0.59
ATG4B-220ENST00000482507 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-220ENST00000482507 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
ATG4B-220ENST00000482507 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
ATG4B-220ENST00000482507 ZNF853P0CG23 659 aa18.7■□□□□ 0.58
ATG4B-220ENST00000482507 MBIPQ9NS73 344 aa18.7■□□□□ 0.58
ATG4B-220ENST00000482507 TOPAZ1Q8N9V7 1692 aa18.69■□□□□ 0.58
ATG4B-220ENST00000482507 ZNF428Q96B54 188 aa18.69■□□□□ 0.58
ATG4B-220ENST00000482507 COG3Q96JB2 828 aa18.69■□□□□ 0.58
ATG4B-220ENST00000482507 MST1RQ04912 1400 aa18.68■□□□□ 0.58
ATG4B-220ENST00000482507 LMOD2Q6P5Q4 547 aa18.68■□□□□ 0.58
ATG4B-220ENST00000482507 SIRT2Q8IXJ6 389 aa18.68■□□□□ 0.58
ATG4B-220ENST00000482507 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
ATG4B-220ENST00000482507 ABTB2Q8N961 1025 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms