RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 LNPKQ9C0E8 428 aa17.78■□□□□ 0.44
NR1H3-220ENST00000481020 CWC22Q9HCG8 908 aaKnown RBP17.77■□□□□ 0.44
NR1H3-220ENST00000481020 FAM135BQ49AJ0 1406 aa17.76■□□□□ 0.43
NR1H3-220ENST00000481020 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
NR1H3-220ENST00000481020 NASPP49321 788 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-220ENST00000481020 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-220ENST00000481020 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
NR1H3-220ENST00000481020 GAS2L3Q86XJ1 694 aa17.75■□□□□ 0.43
NR1H3-220ENST00000481020 ARXQ96QS3 562 aa17.75■□□□□ 0.43
NR1H3-220ENST00000481020 TMEM132EQ6IEE7 984 aa17.75■□□□□ 0.43
NR1H3-220ENST00000481020 ABCC4O15439 1325 aa17.75■□□□□ 0.43
NR1H3-220ENST00000481020 ERBB4Q15303 1308 aa17.75■□□□□ 0.43
NR1H3-220ENST00000481020 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
NR1H3-220ENST00000481020 GNAI1P63096 354 aa17.73■□□□□ 0.43
NR1H3-220ENST00000481020 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
NR1H3-220ENST00000481020 API5Q9BZZ5 524 aaKnown RBP17.73■□□□□ 0.43
NR1H3-220ENST00000481020 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
NR1H3-220ENST00000481020 FYB1O15117 783 aa17.72■□□□□ 0.43
NR1H3-220ENST00000481020 OFD1O75665 1012 aa17.72■□□□□ 0.43
NR1H3-220ENST00000481020 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
NR1H3-220ENST00000481020 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
NR1H3-220ENST00000481020 MAP7D2Q96T17 732 aa17.72■□□□□ 0.43
NR1H3-220ENST00000481020 BAG4O95429 457 aaKnown RBP17.72■□□□□ 0.43
NR1H3-220ENST00000481020 MCM5P33992 734 aa17.72■□□□□ 0.43
NR1H3-220ENST00000481020 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
NR1H3-220ENST00000481020 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
NR1H3-220ENST00000481020 LRRC7Q96NW7 1537 aa17.72■□□□□ 0.43
NR1H3-220ENST00000481020 CD163L1Q9NR16 1453 aa17.72■□□□□ 0.43
NR1H3-220ENST00000481020 PTPRMP28827 1452 aa17.71■□□□□ 0.43
NR1H3-220ENST00000481020 CABP2Q9NPB3 220 aa17.71■□□□□ 0.43
NR1H3-220ENST00000481020 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
NR1H3-220ENST00000481020 MSNP26038 577 aaKnown RBP17.7■□□□□ 0.42
NR1H3-220ENST00000481020 SLC52A1Q9NWF4 448 aa17.7■□□□□ 0.42
NR1H3-220ENST00000481020 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
NR1H3-220ENST00000481020 VAMP4O75379 141 aa17.69■□□□□ 0.42
NR1H3-220ENST00000481020 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
NR1H3-220ENST00000481020 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
NR1H3-220ENST00000481020 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
NR1H3-220ENST00000481020 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
NR1H3-220ENST00000481020 SRPK2P78362 688 aaKnown RBP17.68■□□□□ 0.42
NR1H3-220ENST00000481020 CASC1Q6TDU7 716 aa17.68■□□□□ 0.42
NR1H3-220ENST00000481020 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
NR1H3-220ENST00000481020 ATP7BP35670 1465 aa17.68■□□□□ 0.42
NR1H3-220ENST00000481020 ZNF500O60304 480 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-220ENST00000481020 INTS3Q68E01 1043 aaKnown RBP17.67■□□□□ 0.42
NR1H3-220ENST00000481020 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
NR1H3-220ENST00000481020 RICTORQ6R327 1708 aa17.67■□□□□ 0.42
NR1H3-220ENST00000481020 SSFA2P28290 1259 aa17.67■□□□□ 0.42
NR1H3-220ENST00000481020 MTERF4Q7Z6M4 381 aaKnown RBP17.67■□□□□ 0.42
NR1H3-220ENST00000481020 PDLIM2Q96JY6 352 aa17.67■□□□□ 0.42
NR1H3-220ENST00000481020 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
NR1H3-220ENST00000481020 CSPP1Q1MSJ5 1256 aa17.66■□□□□ 0.42
NR1H3-220ENST00000481020 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
NR1H3-220ENST00000481020 CPSF1Q10570 1443 aaKnown RBP17.66■□□□□ 0.42
NR1H3-220ENST00000481020 ST18O60284 1047 aa17.65■□□□□ 0.42
NR1H3-220ENST00000481020 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
NR1H3-220ENST00000481020 KIF13AQ9H1H9 1805 aa17.64■□□□□ 0.42
NR1H3-220ENST00000481020 TTC22Q5TAA0 569 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 PKNOX2Q96KN3 472 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 TSPOAP1O95153 1857 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 ARHGEF40Q8TER5 1519 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 DLC1Q96QB1 1528 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.41
NR1H3-220ENST00000481020 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
NR1H3-220ENST00000481020 CDK12Q9NYV4 1490 aaPredicted RBP17.63■□□□□ 0.41
NR1H3-220ENST00000481020 YTHDC2Q9H6S0 1430 aaKnown RBP17.63■□□□□ 0.41
NR1H3-220ENST00000481020 SIGLEC1Q9BZZ2 1709 aa17.63■□□□□ 0.41
NR1H3-220ENST00000481020 REC8O95072 547 aa17.63■□□□□ 0.41
NR1H3-220ENST00000481020 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
NR1H3-220ENST00000481020 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
NR1H3-220ENST00000481020 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
NR1H3-220ENST00000481020 AATKQ6ZMQ8 1374 aa17.62■□□□□ 0.41
NR1H3-220ENST00000481020 MCM2P49736 904 aa17.62■□□□□ 0.41
NR1H3-220ENST00000481020 LMBRD1Q9NUN5 540 aa17.62■□□□□ 0.41
NR1H3-220ENST00000481020 ZSCAN23Q3MJ62 389 aa17.61■□□□□ 0.41
NR1H3-220ENST00000481020 MBD3O95983 291 aa17.61■□□□□ 0.41
NR1H3-220ENST00000481020 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
NR1H3-220ENST00000481020 GSPT1P15170 499 aaKnown RBP17.6■□□□□ 0.41
NR1H3-220ENST00000481020 GGT6Q6P531 493 aa17.6■□□□□ 0.41
NR1H3-220ENST00000481020 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
NR1H3-220ENST00000481020 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-220ENST00000481020 ANKRD44Q8N8A2 993 aa17.59■□□□□ 0.41
NR1H3-220ENST00000481020 ZMYND15Q9H091 742 aa17.58■□□□□ 0.41
NR1H3-220ENST00000481020 POLKQ9UBT6 870 aa17.58■□□□□ 0.41
NR1H3-220ENST00000481020 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.41
NR1H3-220ENST00000481020 MCTP1Q6DN14 999 aa17.58■□□□□ 0.4
NR1H3-220ENST00000481020 CCDC39Q9UFE4 941 aa17.58■□□□□ 0.4
NR1H3-220ENST00000481020 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
NR1H3-220ENST00000481020 MBIPQ9NS73 344 aa17.57■□□□□ 0.4
NR1H3-220ENST00000481020 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
NR1H3-220ENST00000481020 LRSAM1Q6UWE0 723 aa17.56■□□□□ 0.4
NR1H3-220ENST00000481020 ZKSCAN5Q9Y2L8 839 aa17.56■□□□□ 0.4
NR1H3-220ENST00000481020 PTPRCP08575 1304 aa17.56■□□□□ 0.4
NR1H3-220ENST00000481020 EPB41L2O43491 1005 aaKnown RBP17.55■□□□□ 0.4
NR1H3-220ENST00000481020 CAVIN1Q6NZI2 390 aaKnown RBP17.55■□□□□ 0.4
NR1H3-220ENST00000481020 PRAM1Q96QH2 718 aa17.55■□□□□ 0.4
NR1H3-220ENST00000481020 OSBPL3Q9H4L5 887 aa17.55■□□□□ 0.4
NR1H3-220ENST00000481020 KIAA0232Q92628 1395 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms