RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PRR20CP86479 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 PRR20DP86480 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 PRR20BP86481 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 PRR20AP86496 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 TRIM67Q6ZTA4 783 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 KCTD15Q96SI1 283 aaPredicted RBP7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 GIGYF1O75420 1035 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 ADH1CP00326 375 aa7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 RNF20Q5VTR2 975 aa7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 WASF2Q9Y6W5 498 aa7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 NR5A1Q13285 461 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC97Q96F63 343 aaPredicted RBP7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 C1orf115Q9H7X2 142 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 PDZRN3Q9UPQ7 1066 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 ESPNB1AK53 854 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 FSHRP23945 695 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 GRM5P41594 1212 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 RNF135Q8IUD6 432 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 TOR4AQ9NXH8 423 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 RAB15P59190 212 aa7.75□□□□□ -1.17
SMARCA1-204ENST00000478420 INTS6LQ5JSJ4 861 aaKnown RBP7.75□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
SMARCA1-204ENST00000478420 J3QL48 77 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 DHX9Q08211 1270 aaKnown RBP7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 PHTF2Q8N3S3 785 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 NFATC2IPQ8NCF5 419 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 UCN2Q96RP3 112 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 PIK3CDO00329 1044 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 SKIP12755 728 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 NNTQ13423 1086 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC116Q8IYX3 515 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 TRIM52Q96A61 297 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 GFRA3O60609 400 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 SMPD1P17405 629 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 Q6ZNB5 142 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 TFIP11Q9UBB9 837 aaKnown RBP7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 PCDHB11Q9Y5F2 797 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 ERVH48-1M5A8F1 160 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 ATP9BO43861 1147 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 NR3C2P08235 984 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 PLPP7Q8NBV4 271 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 CCDC85AQ96PX6 553 aaPredicted RBP7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 EMILIN1Q9Y6C2 1016 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 PPP1R26Q5T8A7 1209 aaPredicted RBP7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 ARID3AQ99856 593 aa7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 PGPEP1Q9NXJ5 209 aa7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 CHIC2Q9UKJ5 165 aa7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 FAM187AA6NFU0 413 aa7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 NRG2O14511 850 aaPredicted RBP7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 LZTS3O60299 673 aaPredicted RBP7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 LAPTM4AQ15012 233 aa7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 HPS1Q92902 700 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 SIRT1Q96EB6 747 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 ESF1Q9H501 851 aaKnown RBP7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 TMPRSS4Q9NRS4 437 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L3A6NCW0 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L4A6NCW7 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 RFX1P22670 979 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 WDR4P57081 412 aaKnown RBP7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 MYT1Q01538 1121 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP4Q13107 963 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 NCOA4Q13772 614 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 EML3Q32P44 896 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 PKDCCQ504Y2 493 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 CFAP70Q5T0N1 1121 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L2Q6R6M4 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L1Q7RTZ2 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 PLEKHM2Q8IWE5 1019 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 DEPDC4Q8N2C3 294 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 ZNF784Q8NCA9 323 aaPredicted RBP7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 DGAT1O75907 488 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 ZIC2O95409 532 aaPredicted RBP7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 CC2D2BQ6DHV5 1058 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 ITPKCQ96DU7 683 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 CDCA7Q9BWT1 371 aaPredicted RBP7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 KLF16Q9BXK1 252 aaPredicted RBP7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 CYLDQ9NQC7 956 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 TIMP2P16035 220 aa7.65□□□□□ -1.18
SMARCA1-204ENST00000478420 ERVK-9P63128 1117 aa7.65□□□□□ -1.18
SMARCA1-204ENST00000478420 NOD1Q9Y239 953 aa7.65□□□□□ -1.18
SMARCA1-204ENST00000478420 SCTRP47872 440 aa7.64□□□□□ -1.19
SMARCA1-204ENST00000478420 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
SMARCA1-204ENST00000478420 CAPN5O15484 640 aaPredicted RBP7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 LILRA1O75019 489 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms