RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PRR20CP86479 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 PRR20DP86480 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 PRR20BP86481 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 PRR20AP86496 221 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 TRIM67Q6ZTA4 783 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 KCTD15Q96SI1 283 aaPredicted RBP7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 GIGYF1O75420 1035 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 ADH1CP00326 375 aa7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 RNF20Q5VTR2 975 aa7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 WASF2Q9Y6W5 498 aa7.78□□□□□ -1.16
SMARCA1-204ENST00000478420 NR5A1Q13285 461 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC97Q96F63 343 aaPredicted RBP7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 C1orf115Q9H7X2 142 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 PDZRN3Q9UPQ7 1066 aa7.77□□□□□ -1.17
SMARCA1-204ENST00000478420 ESPNB1AK53 854 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 FSHRP23945 695 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 GRM5P41594 1212 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 RNF135Q8IUD6 432 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 TOR4AQ9NXH8 423 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
SMARCA1-204ENST00000478420 RAB15P59190 212 aa7.75□□□□□ -1.17
SMARCA1-204ENST00000478420 INTS6LQ5JSJ4 861 aaKnown RBP7.75□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
SMARCA1-204ENST00000478420 J3QL48 77 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 DHX9Q08211 1270 aaKnown RBP7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 PHTF2Q8N3S3 785 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 NFATC2IPQ8NCF5 419 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 UCN2Q96RP3 112 aa7.74□□□□□ -1.17
SMARCA1-204ENST00000478420 PIK3CDO00329 1044 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 SKIP12755 728 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 NNTQ13423 1086 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 CCDC116Q8IYX3 515 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 TRIM52Q96A61 297 aa7.73□□□□□ -1.17
SMARCA1-204ENST00000478420 GFRA3O60609 400 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 SMPD1P17405 629 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 Q6ZNB5 142 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 TFIP11Q9UBB9 837 aaKnown RBP7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 PCDHB11Q9Y5F2 797 aa7.72□□□□□ -1.17
SMARCA1-204ENST00000478420 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 ERVH48-1M5A8F1 160 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 ATP9BO43861 1147 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 NR3C2P08235 984 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 PLPP7Q8NBV4 271 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 CCDC85AQ96PX6 553 aaPredicted RBP7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 EMILIN1Q9Y6C2 1016 aa7.71□□□□□ -1.18
SMARCA1-204ENST00000478420 PPP1R26Q5T8A7 1209 aaPredicted RBP7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 ARID3AQ99856 593 aa7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 PGPEP1Q9NXJ5 209 aa7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 CHIC2Q9UKJ5 165 aa7.7□□□□□ -1.18
SMARCA1-204ENST00000478420 FAM187AA6NFU0 413 aa7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 NRG2O14511 850 aaPredicted RBP7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 LZTS3O60299 673 aaPredicted RBP7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 LAPTM4AQ15012 233 aa7.69□□□□□ -1.18
SMARCA1-204ENST00000478420 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 HPS1Q92902 700 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 SIRT1Q96EB6 747 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 ESF1Q9H501 851 aaKnown RBP7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 TMPRSS4Q9NRS4 437 aa7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L3A6NCW0 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L4A6NCW7 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 RFX1P22670 979 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 WDR4P57081 412 aaKnown RBP7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 MYT1Q01538 1121 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP4Q13107 963 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 NCOA4Q13772 614 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 EML3Q32P44 896 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 PKDCCQ504Y2 493 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 CFAP70Q5T0N1 1121 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L2Q6R6M4 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 USP17L1Q7RTZ2 530 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 PLEKHM2Q8IWE5 1019 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 DEPDC4Q8N2C3 294 aa7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 ZNF784Q8NCA9 323 aaPredicted RBP7.67□□□□□ -1.18
SMARCA1-204ENST00000478420 DGAT1O75907 488 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 ZIC2O95409 532 aaPredicted RBP7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 CC2D2BQ6DHV5 1058 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 ITPKCQ96DU7 683 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 CDCA7Q9BWT1 371 aaPredicted RBP7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 KLF16Q9BXK1 252 aaPredicted RBP7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 CYLDQ9NQC7 956 aa7.66□□□□□ -1.18
SMARCA1-204ENST00000478420 TIMP2P16035 220 aa7.65□□□□□ -1.18
SMARCA1-204ENST00000478420 ERVK-9P63128 1117 aa7.65□□□□□ -1.18
SMARCA1-204ENST00000478420 NOD1Q9Y239 953 aa7.65□□□□□ -1.18
SMARCA1-204ENST00000478420 SCTRP47872 440 aa7.64□□□□□ -1.19
SMARCA1-204ENST00000478420 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
SMARCA1-204ENST00000478420 CAPN5O15484 640 aaPredicted RBP7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 LILRA1O75019 489 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms