RNA–Protein interactions for RNA: ENST00000477039.5

PPARG-213, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 1,705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-213ENST00000477039 QRICH2Q9H0J4 1663 aa11.35□□□□□ -0.59
PPARG-213ENST00000477039 ASXL1Q8IXJ9 1541 aa11.35□□□□□ -0.59
PPARG-213ENST00000477039 BRD1O95696 1058 aa11.35□□□□□ -0.59
PPARG-213ENST00000477039 COG6Q9Y2V7 657 aa11.35□□□□□ -0.59
PPARG-213ENST00000477039 GPHNQ9NQX3 736 aaPredicted RBP11.33□□□□□ -0.6
PPARG-213ENST00000477039 MYO5BQ9ULV0 1848 aa11.33□□□□□ -0.6
PPARG-213ENST00000477039 ESF1Q9H501 851 aaKnown RBP11.32□□□□□ -0.6
PPARG-213ENST00000477039 ARHGEF28Q8N1W1 1705 aaKnown RBP11.32□□□□□ -0.6
PPARG-213ENST00000477039 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
PPARG-213ENST00000477039 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
PPARG-213ENST00000477039 CCDC61Q9Y6R9 512 aa11.31□□□□□ -0.6
PPARG-213ENST00000477039 SMG6Q86US8 1419 aaKnown RBP11.3□□□□□ -0.6
PPARG-213ENST00000477039 TRAK1Q9UPV9 953 aa11.3□□□□□ -0.6
PPARG-213ENST00000477039 ERICH6BQ5W0A0 696 aa11.29□□□□□ -0.6
PPARG-213ENST00000477039 BANK1Q8NDB2 785 aa11.29□□□□□ -0.6
PPARG-213ENST00000477039 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
PPARG-213ENST00000477039 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
PPARG-213ENST00000477039 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
PPARG-213ENST00000477039 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
PPARG-213ENST00000477039 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
PPARG-213ENST00000477039 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
PPARG-213ENST00000477039 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
PPARG-213ENST00000477039 FBXO31Q5XUX0 539 aaPredicted RBP11.28□□□□□ -0.6
PPARG-213ENST00000477039 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
PPARG-213ENST00000477039 EVC2Q86UK5 1308 aa11.27□□□□□ -0.6
PPARG-213ENST00000477039 CLCN1P35523 988 aa11.27□□□□□ -0.61
PPARG-213ENST00000477039 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
PPARG-213ENST00000477039 CALR3Q96L12 384 aaKnown RBP11.27□□□□□ -0.61
PPARG-213ENST00000477039 A2ML1A8K2U0 1454 aa11.27□□□□□ -0.61
PPARG-213ENST00000477039 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.61
PPARG-213ENST00000477039 USP32Q8NFA0 1604 aa11.27□□□□□ -0.61
PPARG-213ENST00000477039 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
PPARG-213ENST00000477039 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
PPARG-213ENST00000477039 PPP2R1AP30153 589 aa11.26□□□□□ -0.61
PPARG-213ENST00000477039 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
PPARG-213ENST00000477039 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
PPARG-213ENST00000477039 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
PPARG-213ENST00000477039 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
PPARG-213ENST00000477039 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
PPARG-213ENST00000477039 MLECQ14165 292 aa11.25□□□□□ -0.61
PPARG-213ENST00000477039 NUTM2DQ5VT03 806 aaPredicted RBP11.25□□□□□ -0.61
PPARG-213ENST00000477039 RIMS2Q9UQ26 1411 aa11.25□□□□□ -0.61
PPARG-213ENST00000477039 TULP4Q9NRJ4 1543 aa11.25□□□□□ -0.61
PPARG-213ENST00000477039 YTHDC2Q9H6S0 1430 aaKnown RBP11.24□□□□□ -0.61
PPARG-213ENST00000477039 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.24□□□□□ -0.61
PPARG-213ENST00000477039 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
PPARG-213ENST00000477039 DLC1Q96QB1 1528 aa11.23□□□□□ -0.61
PPARG-213ENST00000477039 FECHP22830 423 aa11.23□□□□□ -0.61
PPARG-213ENST00000477039 HDGFP51858 240 aaKnown RBP11.23□□□□□ -0.61
PPARG-213ENST00000477039 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
PPARG-213ENST00000477039 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
PPARG-213ENST00000477039 PBXIP1Q96AQ6 731 aa11.22□□□□□ -0.61
PPARG-213ENST00000477039 NSD2O96028 1365 aa11.22□□□□□ -0.61
PPARG-213ENST00000477039 ANKRD36BQ8N2N9 1353 aa11.22□□□□□ -0.61
PPARG-213ENST00000477039 TNRQ92752 1358 aa11.22□□□□□ -0.61
PPARG-213ENST00000477039 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
PPARG-213ENST00000477039 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
PPARG-213ENST00000477039 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
PPARG-213ENST00000477039 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.62
PPARG-213ENST00000477039 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.62
PPARG-213ENST00000477039 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
PPARG-213ENST00000477039 EIF5BO60841 1220 aaKnown RBP11.2□□□□□ -0.62
PPARG-213ENST00000477039 POGKQ9P215 609 aa11.2□□□□□ -0.62
PPARG-213ENST00000477039 CGNL1Q0VF96 1302 aa11.19□□□□□ -0.62
PPARG-213ENST00000477039 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
PPARG-213ENST00000477039 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
PPARG-213ENST00000477039 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
PPARG-213ENST00000477039 OSBPP22059 807 aa11.19□□□□□ -0.62
PPARG-213ENST00000477039 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
PPARG-213ENST00000477039 STRCQ7RTU9 1775 aa11.19□□□□□ -0.62
PPARG-213ENST00000477039 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
PPARG-213ENST00000477039 PROCA1Q8NCQ7 364 aaPredicted RBP11.18□□□□□ -0.62
PPARG-213ENST00000477039 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPARG-213ENST00000477039 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
PPARG-213ENST00000477039 STK26Q9P289 416 aa11.18□□□□□ -0.62
PPARG-213ENST00000477039 RNF123Q5XPI4 1314 aa11.18□□□□□ -0.62
PPARG-213ENST00000477039 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
PPARG-213ENST00000477039 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
PPARG-213ENST00000477039 SND1Q7KZF4 910 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPARG-213ENST00000477039 PRAM1Q96QH2 718 aa11.18□□□□□ -0.62
PPARG-213ENST00000477039 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
PPARG-213ENST00000477039 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
PPARG-213ENST00000477039 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
PPARG-213ENST00000477039 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
PPARG-213ENST00000477039 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
PPARG-213ENST00000477039 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
PPARG-213ENST00000477039 DSG2Q14126 1118 aa11.17□□□□□ -0.62
PPARG-213ENST00000477039 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
PPARG-213ENST00000477039 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
PPARG-213ENST00000477039 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
PPARG-213ENST00000477039 CEBPAP49715 358 aaPredicted RBP11.16□□□□□ -0.62
PPARG-213ENST00000477039 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
PPARG-213ENST00000477039 NGEFQ8N5V2 710 aa11.16□□□□□ -0.62
PPARG-213ENST00000477039 GLMNQ92990 594 aa11.16□□□□□ -0.62
PPARG-213ENST00000477039 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
PPARG-213ENST00000477039 SETD1BQ9UPS6 1966 aaKnown RBP11.16□□□□□ -0.62
PPARG-213ENST00000477039 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.62
PPARG-213ENST00000477039 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.62
PPARG-213ENST00000477039 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
PPARG-213ENST00000477039 FOXK1P85037 733 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms