RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CDC5LQ99459 802 aaKnown RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 CNNM1Q9NRU3 951 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 GTF3C3Q9Y5Q9 886 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 ARAP3Q8WWN8 1544 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 ZNF710Q8N1W2 664 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 FAM184AQ8NB25 1140 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 SUPT20HQ8NEM7 779 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 WASHC4Q2M389 1173 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 EYA3Q99504 573 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 CABP1Q9NZU7 370 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 NSD3Q9BZ95 1437 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 CPLX1O14810 134 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 IDI1Q13907 227 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 CAVIN4Q5BKX8 364 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 SOGA3Q5TF21 947 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 CTNNA3Q9UI47 895 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 IFIT1P09914 478 aaKnown RBP5.59□□□□□ -1.51
CCNL1-215ENST00000474539 RDXP35241 583 aaKnown RBP5.59□□□□□ -1.51
CCNL1-215ENST00000474539 GSTO1P78417 241 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 TSR1Q2NL82 804 aaKnown RBP5.59□□□□□ -1.51
CCNL1-215ENST00000474539 CENPQQ7L2Z9 268 aaPredicted RBP5.59□□□□□ -1.51
CCNL1-215ENST00000474539 DZIP1LQ8IYY4 767 aaKnown RBP5.59□□□□□ -1.51
CCNL1-215ENST00000474539 HYPKQ9NX55 129 aa5.59□□□□□ -1.51
CCNL1-215ENST00000474539 PRKCSHP14314 528 aaPredicted RBP5.59□□□□□ -1.52
CCNL1-215ENST00000474539 DHX8Q14562 1220 aaKnown RBP5.59□□□□□ -1.52
CCNL1-215ENST00000474539 CNTROBQ8N137 903 aa5.59□□□□□ -1.52
CCNL1-215ENST00000474539 DDX54Q8TDD1 881 aaKnown RBP5.59□□□□□ -1.52
CCNL1-215ENST00000474539 ABCA8O94911 1581 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 TPM3P06753 285 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 PIP4K2AP48426 406 aaPredicted RBP5.58□□□□□ -1.52
CCNL1-215ENST00000474539 NUP153P49790 1475 aaKnown RBP5.58□□□□□ -1.52
CCNL1-215ENST00000474539 ATP7AQ04656 1500 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 SF3A1Q15459 793 aaKnown RBP5.58□□□□□ -1.52
CCNL1-215ENST00000474539 MAGI3Q5TCQ9 1506 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 HDGFL1Q5TGJ6 251 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 CCDC146Q8IYE0 955 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 TNIP1Q15025 636 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 DDB1Q16531 1140 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 TMEM132EQ6IEE7 984 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 CNKSR2Q8WXI2 1034 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 BABAM1Q9NWV8 329 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 TCOF1Q13428 1488 aaKnown RBP5.58□□□□□ -1.52
CCNL1-215ENST00000474539 APPP05067 770 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 LRRCC1Q9C099 1032 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 GGNBP2Q9H3C7 697 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 BTBD11A6QL63 1104 aa5.58□□□□□ -1.52
CCNL1-215ENST00000474539 H3BQV1 296 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 RFC4P35249 363 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 MCM2P49736 904 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 TTC39AQ5SRH9 613 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 IFFO2Q5TF58 517 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 DESP17661 470 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 CEP126Q9P2H0 1117 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 PARP3Q9Y6F1 533 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 ZFYVE9O95405 1425 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 GNAI2P04899 355 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 LMOD1P29536 600 aaPredicted RBP5.57□□□□□ -1.52
CCNL1-215ENST00000474539 INTS3Q68E01 1043 aaKnown RBP5.57□□□□□ -1.52
CCNL1-215ENST00000474539 GCC1Q96CN9 775 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 ZBED9Q6R2W3 1325 aa5.57□□□□□ -1.52
CCNL1-215ENST00000474539 TRPC5Q9UL62 973 aaPredicted RBP5.56□□□□□ -1.52
CCNL1-215ENST00000474539 NAIPQ13075 1403 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 SYCP2Q9BX26 1530 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 MLH3Q9UHC1 1453 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 TAF7Q15545 349 aaPredicted RBP5.56□□□□□ -1.52
CCNL1-215ENST00000474539 NFE2L2Q16236 605 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 CCDC27Q2M243 656 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 NFXL1Q6ZNB6 911 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
CCNL1-215ENST00000474539 PRKRIP1Q9H875 184 aaPredicted RBP5.56□□□□□ -1.52
CCNL1-215ENST00000474539 RRP7AQ9Y3A4 280 aaKnown RBP5.56□□□□□ -1.52
CCNL1-215ENST00000474539 TULP1O00294 542 aaPredicted RBP5.56□□□□□ -1.52
CCNL1-215ENST00000474539 CDKL5O76039 1030 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 ADAMTS2O95450 1211 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 IL2RBP14784 551 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 TXLNAP40222 546 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 ANKRD1Q15327 319 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 WASF1Q92558 559 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 PCDH11XQ9BZA7 1347 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 PCDH11YQ9BZA8 1340 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 RAB11FIP3O75154 756 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 PRKAR2BP31323 418 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 RGS3P49796 1198 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 SULT6B1Q6IMI4 303 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
CCNL1-215ENST00000474539 ARHGEF5Q12774 1597 aa5.56□□□□□ -1.52
CCNL1-215ENST00000474539 NOS1P29475 1434 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 SLC5A1P13866 664 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 IKQ13123 557 aaPredicted RBP5.55□□□□□ -1.52
CCNL1-215ENST00000474539 TTF1Q15361 905 aaPredicted RBP5.55□□□□□ -1.52
CCNL1-215ENST00000474539 MIER1Q8N108 512 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 BEGAINQ9BUH8 593 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 TNNI2P48788 182 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 KRT32Q14532 448 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 TXLNBQ8N3L3 684 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 IFT57Q9NWB7 429 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 GRIPAP1Q4V328 841 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 CCDC87Q9NVE4 849 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 PNMA2Q9UL42 364 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 KDM6BO15054 1643 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms