RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 ITGBL1O95965 494 aaPredicted RBP9.53□□□□□ -0.88
RBM39-227ENST00000470563 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 PTK7Q13308 1070 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 ZBTB33Q86T24 672 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 ZNF511Q8NB15 262 aa9.53□□□□□ -0.88
RBM39-227ENST00000470563 ESPNB1AK53 854 aa9.52□□□□□ -0.89
RBM39-227ENST00000470563 NCOA4Q13772 614 aa9.52□□□□□ -0.89
RBM39-227ENST00000470563 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
RBM39-227ENST00000470563 MKRN1Q9UHC7 482 aaKnown RBP9.52□□□□□ -0.89
RBM39-227ENST00000470563 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.89
RBM39-227ENST00000470563 SWI5Q1ZZU3 235 aa9.51□□□□□ -0.89
RBM39-227ENST00000470563 EML3Q32P44 896 aa9.51□□□□□ -0.89
RBM39-227ENST00000470563 ERFEQ4G0M1 354 aa9.51□□□□□ -0.89
RBM39-227ENST00000470563 TMCO4Q5TGY1 634 aa9.51□□□□□ -0.89
RBM39-227ENST00000470563 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
RBM39-227ENST00000470563 CLP1Q92989 425 aaKnown RBP9.51□□□□□ -0.89
RBM39-227ENST00000470563 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
RBM39-227ENST00000470563 ATP1A2P50993 1020 aa9.5□□□□□ -0.89
RBM39-227ENST00000470563 MMRN1Q13201 1228 aa9.5□□□□□ -0.89
RBM39-227ENST00000470563 DZIP3Q86Y13 1208 aaKnown RBP9.5□□□□□ -0.89
RBM39-227ENST00000470563 SIX5Q8N196 739 aa9.5□□□□□ -0.89
RBM39-227ENST00000470563 FAM69CQ0P6D2 419 aa9.49□□□□□ -0.89
RBM39-227ENST00000470563 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
RBM39-227ENST00000470563 TMEM164Q5U3C3 297 aa9.49□□□□□ -0.89
RBM39-227ENST00000470563 LARP1Q6PKG0 1096 aaKnown RBP9.49□□□□□ -0.89
RBM39-227ENST00000470563 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
RBM39-227ENST00000470563 C1orf216Q8TAB5 229 aa9.49□□□□□ -0.89
RBM39-227ENST00000470563 MAP4K5Q9Y4K4 846 aa9.49□□□□□ -0.89
RBM39-227ENST00000470563 DKK1O94907 266 aa9.48□□□□□ -0.89
RBM39-227ENST00000470563 S1PR4O95977 384 aa9.48□□□□□ -0.89
RBM39-227ENST00000470563 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
RBM39-227ENST00000470563 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
RBM39-227ENST00000470563 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
RBM39-227ENST00000470563 NOD1Q9Y239 953 aa9.48□□□□□ -0.89
RBM39-227ENST00000470563 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
RBM39-227ENST00000470563 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
RBM39-227ENST00000470563 ANKMY2Q8IV38 441 aa9.47□□□□□ -0.89
RBM39-227ENST00000470563 CCDC24Q8N4L8 307 aa9.47□□□□□ -0.89
RBM39-227ENST00000470563 STK32AQ8WU08 396 aa9.47□□□□□ -0.89
RBM39-227ENST00000470563 BAP1Q92560 729 aa9.47□□□□□ -0.89
RBM39-227ENST00000470563 FCF1Q9Y324 198 aaKnown RBP9.47□□□□□ -0.89
RBM39-227ENST00000470563 SSFA2P28290 1259 aa9.46□□□□□ -0.9
RBM39-227ENST00000470563 WNT7BP56706 349 aa9.46□□□□□ -0.9
RBM39-227ENST00000470563 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
RBM39-227ENST00000470563 ANKLE1Q8NAG6 615 aa9.46□□□□□ -0.9
RBM39-227ENST00000470563 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
RBM39-227ENST00000470563 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
RBM39-227ENST00000470563 RASA1P20936 1047 aa9.45□□□□□ -0.9
RBM39-227ENST00000470563 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.9
RBM39-227ENST00000470563 MPNDQ8N594 471 aa9.45□□□□□ -0.9
RBM39-227ENST00000470563 FAM200AQ8TCP9 573 aa9.45□□□□□ -0.9
RBM39-227ENST00000470563 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
RBM39-227ENST00000470563 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
RBM39-227ENST00000470563 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
RBM39-227ENST00000470563 PTPN5P54829 565 aa9.44□□□□□ -0.9
RBM39-227ENST00000470563 SH3BP2P78314 561 aa9.44□□□□□ -0.9
RBM39-227ENST00000470563 PHLDB3Q6NSJ2 640 aa9.44□□□□□ -0.9
RBM39-227ENST00000470563 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
RBM39-227ENST00000470563 OGFOD1Q8N543 542 aa9.44□□□□□ -0.9
RBM39-227ENST00000470563 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
RBM39-227ENST00000470563 M0R2N6 131 aa9.43□□□□□ -0.9
RBM39-227ENST00000470563 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
RBM39-227ENST00000470563 RPIAP49247 311 aa9.43□□□□□ -0.9
RBM39-227ENST00000470563 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
RBM39-227ENST00000470563 CLDN10P78369 228 aa9.43□□□□□ -0.9
RBM39-227ENST00000470563 KCNC4Q03721 635 aa9.43□□□□□ -0.9
RBM39-227ENST00000470563 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
RBM39-227ENST00000470563 DNAAF2Q9NVR5 837 aaKnown RBP9.43□□□□□ -0.9
RBM39-227ENST00000470563 HCSTQ9UBK5 93 aa9.43□□□□□ -0.9
RBM39-227ENST00000470563 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
RBM39-227ENST00000470563 GIGYF1O75420 1035 aaPredicted RBP9.42□□□□□ -0.9
RBM39-227ENST00000470563 GGCXP38435 758 aa9.42□□□□□ -0.9
RBM39-227ENST00000470563 CCER1Q8TC90 406 aaPredicted RBP9.42□□□□□ -0.9
RBM39-227ENST00000470563 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
RBM39-227ENST00000470563 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
RBM39-227ENST00000470563 USP4Q13107 963 aa9.41□□□□□ -0.9
RBM39-227ENST00000470563 CARNS1A5YM72 827 aa9.4□□□□□ -0.9
RBM39-227ENST00000470563 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
RBM39-227ENST00000470563 NPM2Q86SE8 214 aaKnown RBP9.4□□□□□ -0.9
RBM39-227ENST00000470563 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
RBM39-227ENST00000470563 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
RBM39-227ENST00000470563 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
RBM39-227ENST00000470563 GTF2IP78347 998 aa9.39□□□□□ -0.91
RBM39-227ENST00000470563 DPYDQ12882 1025 aa9.39□□□□□ -0.91
RBM39-227ENST00000470563 TRIM32Q13049 653 aa9.39□□□□□ -0.91
RBM39-227ENST00000470563 AGERQ15109 404 aa9.39□□□□□ -0.91
RBM39-227ENST00000470563 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
RBM39-227ENST00000470563 CDK15Q96Q40 435 aa9.39□□□□□ -0.91
RBM39-227ENST00000470563 AMOTL2Q9Y2J4 779 aa9.39□□□□□ -0.91
RBM39-227ENST00000470563 RNF223E7ERA6 249 aa9.38□□□□□ -0.91
RBM39-227ENST00000470563 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
RBM39-227ENST00000470563 ZBTB24O43167 697 aaPredicted RBP9.38□□□□□ -0.91
RBM39-227ENST00000470563 RANGAP1P46060 587 aaPredicted RBP9.38□□□□□ -0.91
RBM39-227ENST00000470563 SEC13P55735 322 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms