RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ARHGEF28Q8N1W1 1705 aaKnown RBP15.28■□□□□ 0.04
HDAC3-203ENST00000467533 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
HDAC3-203ENST00000467533 USP19O94966 1318 aa15.26■□□□□ 0.03
HDAC3-203ENST00000467533 PAPPAQ13219 1627 aa15.26■□□□□ 0.03
HDAC3-203ENST00000467533 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
HDAC3-203ENST00000467533 NUDT16Q96DE0 195 aaKnown RBP15.26■□□□□ 0.03
HDAC3-203ENST00000467533 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
HDAC3-203ENST00000467533 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
HDAC3-203ENST00000467533 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
HDAC3-203ENST00000467533 MARCH10Q8NA82 808 aaPredicted RBP15.24■□□□□ 0.03
HDAC3-203ENST00000467533 BCL9O00512 1426 aa15.24■□□□□ 0.03
HDAC3-203ENST00000467533 ACEP12821 1306 aa15.23■□□□□ 0.03
HDAC3-203ENST00000467533 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
HDAC3-203ENST00000467533 MPHOSPH9Q99550 1183 aa15.22■□□□□ 0.03
HDAC3-203ENST00000467533 GCP02774 474 aa15.21■□□□□ 0.03
HDAC3-203ENST00000467533 QSER1Q2KHR3 1735 aa15.2■□□□□ 0.02
HDAC3-203ENST00000467533 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
HDAC3-203ENST00000467533 ATP10DQ9P241 1426 aa15.19■□□□□ 0.02
HDAC3-203ENST00000467533 HSPA6P17066 643 aa15.19■□□□□ 0.02
HDAC3-203ENST00000467533 COL24A1Q17RW2 1714 aa15.19■□□□□ 0.02
HDAC3-203ENST00000467533 COL18A1P39060 1754 aa15.19■□□□□ 0.02
HDAC3-203ENST00000467533 BTAF1O14981 1849 aa15.18■□□□□ 0.02
HDAC3-203ENST00000467533 POLD1P28340 1107 aa15.18■□□□□ 0.02
HDAC3-203ENST00000467533 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
HDAC3-203ENST00000467533 RGPD5Q99666 1765 aa15.18■□□□□ 0.02
HDAC3-203ENST00000467533 SLIT3O75094 1523 aa15.17■□□□□ 0.02
HDAC3-203ENST00000467533 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
HDAC3-203ENST00000467533 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
HDAC3-203ENST00000467533 TUBGCP6Q96RT7 1819 aa15.16■□□□□ 0.02
HDAC3-203ENST00000467533 ZNF827Q17R98 1081 aa15.16■□□□□ 0.02
HDAC3-203ENST00000467533 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
HDAC3-203ENST00000467533 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
HDAC3-203ENST00000467533 TNS2Q63HR2 1409 aa15.16■□□□□ 0.02
HDAC3-203ENST00000467533 GPBP1L1Q9HC44 474 aaPredicted RBP15.15■□□□□ 0.02
HDAC3-203ENST00000467533 PLEKHG3A1L390 1219 aa15.14■□□□□ 0.01
HDAC3-203ENST00000467533 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
HDAC3-203ENST00000467533 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
HDAC3-203ENST00000467533 ABCC6O95255 1503 aa15.13■□□□□ 0.01
HDAC3-203ENST00000467533 CPSF1Q10570 1443 aaKnown RBP15.13■□□□□ 0.01
HDAC3-203ENST00000467533 PPIP5K1Q6PFW1 1433 aa15.13■□□□□ 0.01
HDAC3-203ENST00000467533 ACSBG1Q96GR2 724 aa15.13■□□□□ 0.01
HDAC3-203ENST00000467533 TRPM1Q7Z4N2 1603 aa15.13■□□□□ 0.01
HDAC3-203ENST00000467533 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
HDAC3-203ENST00000467533 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
HDAC3-203ENST00000467533 GOLGB1Q14789 3259 aaKnown RBP15.12■□□□□ 0.01
HDAC3-203ENST00000467533 EXOC5O00471 708 aa15.12■□□□□ 0.01
HDAC3-203ENST00000467533 CSB-PGBD3P0DP91 1061 aa15.12■□□□□ 0.01
HDAC3-203ENST00000467533 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.018e-8■□□□□ 10
HDAC3-203ENST00000467533 SLC16A10Q8TF71 515 aa15.12■□□□□ 0.01
HDAC3-203ENST00000467533 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
HDAC3-203ENST00000467533 NLRP6P59044 892 aa15.11■□□□□ 0.01
HDAC3-203ENST00000467533 ZNF526Q8TF50 670 aaPredicted RBP15.11■□□□□ 0.01
HDAC3-203ENST00000467533 CARD10Q9BWT7 1032 aa15.1■□□□□ 0.01
HDAC3-203ENST00000467533 USP6P35125 1406 aa15.09■□□□□ 0.01
HDAC3-203ENST00000467533 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
HDAC3-203ENST00000467533 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
HDAC3-203ENST00000467533 DCAF11Q8TEB1 546 aa15.08■□□□□ 0
HDAC3-203ENST00000467533 PNPLA7Q6ZV29 1317 aa15.08■□□□□ 0
HDAC3-203ENST00000467533 ADCY9O60503 1353 aa15.08■□□□□ 0
HDAC3-203ENST00000467533 AKT1S1Q96B36 256 aa15.07■□□□□ 0
HDAC3-203ENST00000467533 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
HDAC3-203ENST00000467533 KAT6BQ8WYB5 2073 aa15.06■□□□□ 0
HDAC3-203ENST00000467533 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
HDAC3-203ENST00000467533 CAPN15O75808 1086 aa15.05■□□□□ -0
HDAC3-203ENST00000467533 TFCP2L1Q9NZI6 479 aa15.05■□□□□ -0
HDAC3-203ENST00000467533 SOX12O15370 315 aa15.04■□□□□ -0
HDAC3-203ENST00000467533 APLP1P51693 650 aa15.02■□□□□ -0
HDAC3-203ENST00000467533 SLC27A3Q5K4L6 730 aa15.02■□□□□ -0
HDAC3-203ENST00000467533 ARHGEF25Q86VW2 580 aa15.02■□□□□ -0
HDAC3-203ENST00000467533 NFAT5O94916 1531 aa15.02□□□□□ -0.01
HDAC3-203ENST00000467533 LY75O60449 1722 aa15.01□□□□□ -0.01
HDAC3-203ENST00000467533 KIAA1210Q9ULL0 1709 aa15.01□□□□□ -0.01
HDAC3-203ENST00000467533 MSH5O43196 834 aa15.01□□□□□ -0.01
HDAC3-203ENST00000467533 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
HDAC3-203ENST00000467533 CABP2Q9NPB3 220 aa15.01□□□□□ -0.01
HDAC3-203ENST00000467533 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
HDAC3-203ENST00000467533 WDR90Q96KV7 1748 aa15□□□□□ -0.01
HDAC3-203ENST00000467533 KIF3CO14782 793 aa14.98□□□□□ -0.01
HDAC3-203ENST00000467533 IL2RBP14784 551 aa14.98□□□□□ -0.01
HDAC3-203ENST00000467533 KCNQ4P56696 695 aa14.98□□□□□ -0.01
HDAC3-203ENST00000467533 MSL1Q68DK7 614 aa14.98□□□□□ -0.01
HDAC3-203ENST00000467533 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
HDAC3-203ENST00000467533 CABP1Q9NZU7 370 aa14.98□□□□□ -0.01
HDAC3-203ENST00000467533 LTN1O94822 1766 aa14.98□□□□□ -0.01
HDAC3-203ENST00000467533 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
HDAC3-203ENST00000467533 COL13A1Q5TAT6 717 aaPredicted RBP14.96□□□□□ -0.01
HDAC3-203ENST00000467533 ERBB3P21860 1342 aa14.94□□□□□ -0.02
HDAC3-203ENST00000467533 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
HDAC3-203ENST00000467533 DNAJC5GQ8N7S2 189 aa14.94□□□□□ -0.02
HDAC3-203ENST00000467533 SYTL4Q96C24 671 aaPredicted RBP14.94□□□□□ -0.02
HDAC3-203ENST00000467533 CD2APQ9Y5K6 639 aa14.94□□□□□ -0.02
HDAC3-203ENST00000467533 C5P01031 1676 aa14.93□□□□□ -0.02
HDAC3-203ENST00000467533 TTC21BQ7Z4L5 1316 aa14.93□□□□□ -0.02
HDAC3-203ENST00000467533 COL23A1Q86Y22 540 aaPredicted RBP14.93□□□□□ -0.02
HDAC3-203ENST00000467533 TNS4Q8IZW8 715 aa14.93□□□□□ -0.02
HDAC3-203ENST00000467533 WWC3Q9ULE0 1092 aa14.93□□□□□ -0.02
HDAC3-203ENST00000467533 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
HDAC3-203ENST00000467533 CICQ96RK0 1608 aaPredicted RBP14.92□□□□□ -0.02
HDAC3-203ENST00000467533 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
HDAC3-203ENST00000467533 FAM208AQ9UK61 1670 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms