RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 NCBP3Q53F19 620 aaKnown RBP24.42■■□□□ 1.5
CNEP1R1-203ENST00000458059 BMP2KLQ5H9B9 411 aa24.42■■□□□ 1.5
CNEP1R1-203ENST00000458059 TXNDC2Q86VQ3 553 aa24.41■■□□□ 1.5
CNEP1R1-203ENST00000458059 OSCARQ8IYS5 282 aa24.4■■□□□ 1.5
CNEP1R1-203ENST00000458059 NAP1L5Q96NT1 182 aaPredicted RBP24.4■■□□□ 1.5
CNEP1R1-203ENST00000458059 OTUD7AQ8TE49 926 aaPredicted RBP24.39■■□□□ 1.5
CNEP1R1-203ENST00000458059 DDX11L8A8MPP1 907 aa24.39■■□□□ 1.49
CNEP1R1-203ENST00000458059 SSFA2P28290 1259 aa24.39■■□□□ 1.49
CNEP1R1-203ENST00000458059 GRPEL1Q9HAV7 217 aa24.39■■□□□ 1.49
CNEP1R1-203ENST00000458059 GAS2L3Q86XJ1 694 aa24.39■■□□□ 1.49
CNEP1R1-203ENST00000458059 AEBP1Q8IUX7 1158 aa24.39■■□□□ 1.49
CNEP1R1-203ENST00000458059 GAS2L2Q8NHY3 880 aa24.39■■□□□ 1.49
CNEP1R1-203ENST00000458059 GNAI1P63096 354 aa24.38■■□□□ 1.49
CNEP1R1-203ENST00000458059 PNPLA6Q8IY17 1366 aa24.38■■□□□ 1.49
CNEP1R1-203ENST00000458059 SMARCA5O60264 1052 aaPredicted RBP24.37■■□□□ 1.49
CNEP1R1-203ENST00000458059 FAM135BQ49AJ0 1406 aa24.37■■□□□ 1.49
CNEP1R1-203ENST00000458059 GCC1Q96CN9 775 aa24.36■■□□□ 1.49
CNEP1R1-203ENST00000458059 GSPT1P15170 499 aaKnown RBP24.36■■□□□ 1.49
CNEP1R1-203ENST00000458059 IL13P35225 146 aa24.35■■□□□ 1.49
CNEP1R1-203ENST00000458059 MIS18AQ9NYP9 233 aa24.34■■□□□ 1.49
CNEP1R1-203ENST00000458059 DIP2CQ9Y2E4 1556 aa24.34■■□□□ 1.49
CNEP1R1-203ENST00000458059 MCM10Q7L590 875 aa24.34■■□□□ 1.49
CNEP1R1-203ENST00000458059 K7ELQ4 463 aaPredicted RBP24.33■■□□□ 1.49
CNEP1R1-203ENST00000458059 MRE11P49959 708 aa24.33■■□□□ 1.49
CNEP1R1-203ENST00000458059 AK9Q5TCS8 1911 aa24.33■■□□□ 1.49
CNEP1R1-203ENST00000458059 SNX21Q969T3 373 aa24.33■■□□□ 1.49
CNEP1R1-203ENST00000458059 GBP4Q96PP9 640 aa24.33■■□□□ 1.49
CNEP1R1-203ENST00000458059 IFT57Q9NWB7 429 aa24.33■■□□□ 1.49
CNEP1R1-203ENST00000458059 DDIT3P35638 169 aa24.33■■□□□ 1.48
CNEP1R1-203ENST00000458059 NCLP19338 710 aaKnown RBP24.32■■□□□ 1.48
CNEP1R1-203ENST00000458059 COG3Q96JB2 828 aa24.31■■□□□ 1.48
CNEP1R1-203ENST00000458059 MAP2P11137 1827 aaKnown RBP24.31■■□□□ 1.48
CNEP1R1-203ENST00000458059 RAB3GAP1Q15042 981 aa24.31■■□□□ 1.48
CNEP1R1-203ENST00000458059 ARHGEF40Q8TER5 1519 aa24.3■■□□□ 1.48
CNEP1R1-203ENST00000458059 CDC45O75419 566 aa24.3■■□□□ 1.48
CNEP1R1-203ENST00000458059 SULT6B1Q6IMI4 303 aa24.3■■□□□ 1.48
CNEP1R1-203ENST00000458059 CFAP44Q96MT7 982 aa24.3■■□□□ 1.48
CNEP1R1-203ENST00000458059 ZFYVE9O95405 1425 aa24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 FOXD4L5Q5VV16 416 aaPredicted RBP24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 PLEKHM2Q8IWE5 1019 aa24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 FOXD4L4Q8WXT5 416 aaPredicted RBP24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 ABCC4O15439 1325 aa24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 CALD1Q05682 793 aaKnown RBP24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 CHAMP1Q96JM3 812 aa24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 ALKQ9UM73 1620 aa24.29■■□□□ 1.48
CNEP1R1-203ENST00000458059 PKP1Q13835 747 aa24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 NUDT16Q96DE0 195 aaKnown RBP24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 ERBB4Q15303 1308 aa24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 TMEM131LA2VDJ0 1609 aa24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 SLC4A10Q6U841 1118 aa24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 NCOA3Q9Y6Q9 1424 aa24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 ZNF853P0CG23 659 aa24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 API5Q9BZZ5 524 aaKnown RBP24.27■■□□□ 1.48
CNEP1R1-203ENST00000458059 WASLO00401 505 aaPredicted RBP24.26■■□□□ 1.47
CNEP1R1-203ENST00000458059 MED14O60244 1454 aa24.26■■□□□ 1.47
CNEP1R1-203ENST00000458059 TSHZ3Q63HK5 1081 aa24.26■■□□□ 1.47
CNEP1R1-203ENST00000458059 ARHGAP45Q92619 1136 aa24.26■■□□□ 1.47
CNEP1R1-203ENST00000458059 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
CNEP1R1-203ENST00000458059 DDX49Q9Y6V7 483 aaKnown RBP24.25■■□□□ 1.47
CNEP1R1-203ENST00000458059 TRIM44Q96DX7 344 aaPredicted RBP24.25■■□□□ 1.47
CNEP1R1-203ENST00000458059 ARHGAP31Q2M1Z3 1444 aa24.25■■□□□ 1.47
CNEP1R1-203ENST00000458059 MEIS3Q99687 375 aa24.24■■□□□ 1.47
CNEP1R1-203ENST00000458059 MCTP1Q6DN14 999 aa24.24■■□□□ 1.47
CNEP1R1-203ENST00000458059 ZNF428Q96B54 188 aa24.24■■□□□ 1.47
CNEP1R1-203ENST00000458059 PTCH1Q13635 1447 aa24.24■■□□□ 1.47
CNEP1R1-203ENST00000458059 CHMP4BQ9H444 224 aaKnown RBP24.24■■□□□ 1.47
CNEP1R1-203ENST00000458059 ANKRD26Q9UPS8 1709 aa24.23■■□□□ 1.47
CNEP1R1-203ENST00000458059 KIF20BQ96Q89 1820 aa24.23■■□□□ 1.47
CNEP1R1-203ENST00000458059 F6X3S4 739 aa24.23■■□□□ 1.47
CNEP1R1-203ENST00000458059 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
CNEP1R1-203ENST00000458059 NECTIN2Q92692 538 aa24.22■■□□□ 1.47
CNEP1R1-203ENST00000458059 PREX1Q8TCU6 1659 aa24.22■■□□□ 1.47
CNEP1R1-203ENST00000458059 BRPF1P55201 1214 aaPredicted RBP24.22■■□□□ 1.47
CNEP1R1-203ENST00000458059 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
CNEP1R1-203ENST00000458059 NOL8Q76FK4 1167 aaKnown RBP24.21■■□□□ 1.47
CNEP1R1-203ENST00000458059 TTC22Q5TAA0 569 aa24.21■■□□□ 1.47
CNEP1R1-203ENST00000458059 CIZ1Q9ULV3 898 aaPredicted RBP24.21■■□□□ 1.47
CNEP1R1-203ENST00000458059 FOXO3O43524 673 aa24.2■■□□□ 1.46
CNEP1R1-203ENST00000458059 SDSP20132 328 aa24.2■■□□□ 1.46
CNEP1R1-203ENST00000458059 HSP90AB2PQ58FF8 381 aa24.2■■□□□ 1.46
CNEP1R1-203ENST00000458059 ZGPATQ8N5A5 531 aaKnown RBP24.2■■□□□ 1.46
CNEP1R1-203ENST00000458059 DCTPP1Q9H773 170 aa24.2■■□□□ 1.46
CNEP1R1-203ENST00000458059 METP08581 1390 aa24.19■■□□□ 1.46
CNEP1R1-203ENST00000458059 ESPNB1AK53 854 aa24.19■■□□□ 1.46
CNEP1R1-203ENST00000458059 BAG4O95429 457 aaKnown RBP24.19■■□□□ 1.46
CNEP1R1-203ENST00000458059 LMOD3Q0VAK6 560 aa24.19■■□□□ 1.46
CNEP1R1-203ENST00000458059 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
CNEP1R1-203ENST00000458059 NEO1Q92859 1461 aa24.19■■□□□ 1.46
CNEP1R1-203ENST00000458059 MSH6P52701 1360 aa24.18■■□□□ 1.46
CNEP1R1-203ENST00000458059 SLC4A2P04920 1241 aa24.18■■□□□ 1.46
CNEP1R1-203ENST00000458059 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
CNEP1R1-203ENST00000458059 GOLGA6L22H0YM25 854 aa24.18■■□□□ 1.46
CNEP1R1-203ENST00000458059 CLCN1P35523 988 aa24.17■■□□□ 1.46
CNEP1R1-203ENST00000458059 CAVIN1Q6NZI2 390 aaKnown RBP24.17■■□□□ 1.46
CNEP1R1-203ENST00000458059 CCDC61Q9Y6R9 512 aa24.17■■□□□ 1.46
CNEP1R1-203ENST00000458059 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
CNEP1R1-203ENST00000458059 CPS1P31327 1500 aa24.17■■□□□ 1.46
CNEP1R1-203ENST00000458059 CEP85Q6P2H3 762 aa24.17■■□□□ 1.46
CNEP1R1-203ENST00000458059 G2E3Q7L622 706 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms